RNA–Protein interactions for RNA: ENST00000489444.6

GBP3-207, Transcript of guanylate binding protein 3, humanhuman

TSL 1 (best)

Gene GBP3, Length 2,455 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GBP3-207ENST00000489444 TSPY4P0CV99 314 aa7.49□□□□□ -1.21
GBP3-207ENST00000489444 TSPY10P0CW01 314 aa7.49□□□□□ -1.21
GBP3-207ENST00000489444 ESF1Q9H501 851 aaKnown RBP7.48□□□□□ -1.21
GBP3-207ENST00000489444 DNMT1P26358 1616 aaKnown RBP7.48□□□□□ -1.21
GBP3-207ENST00000489444 EIF2AK4Q9P2K8 1649 aaKnown RBP7.47□□□□□ -1.21
GBP3-207ENST00000489444 C3P01024 1663 aa7.47□□□□□ -1.21
GBP3-207ENST00000489444 PREX1Q8TCU6 1659 aa7.47□□□□□ -1.21
GBP3-207ENST00000489444 LMTK3Q96Q04 1460 aa7.46□□□□□ -1.21
GBP3-207ENST00000489444 DAPK1P53355 1430 aa7.46□□□□□ -1.21
GBP3-207ENST00000489444 ABCC5O15440 1437 aa7.46□□□□□ -1.22
GBP3-207ENST00000489444 DUOX2Q9NRD8 1548 aa7.46□□□□□ -1.22
GBP3-207ENST00000489444 CLTCQ00610 1675 aaKnown RBP7.45□□□□□ -1.22
GBP3-207ENST00000489444 RNF17Q9BXT8 1623 aaKnown RBP7.45□□□□□ -1.22
GBP3-207ENST00000489444 NPATQ14207 1427 aa7.45□□□□□ -1.22
GBP3-207ENST00000489444 KDM5DQ9BY66 1539 aa7.45□□□□□ -1.22
GBP3-207ENST00000489444 ERBINQ96RT1 1412 aa7.44□□□□□ -1.22
GBP3-207ENST00000489444 ZC3H13Q5T200 1668 aaKnown RBP7.44□□□□□ -1.22
GBP3-207ENST00000489444 UHRF1BP1Q6BDS2 1440 aa7.43□□□□□ -1.22
GBP3-207ENST00000489444 ADGRL2O95490 1459 aa7.43□□□□□ -1.22
GBP3-207ENST00000489444 GGT6Q6P531 493 aa7.43□□□□□ -1.22
GBP3-207ENST00000489444 ZMYM3Q14202 1370 aa7.43□□□□□ -1.22
GBP3-207ENST00000489444 KIF3BO15066 747 aa7.42□□□□□ -1.22
GBP3-207ENST00000489444 ANKRD30AQ9BXX3 1397 aa7.42□□□□□ -1.22
GBP3-207ENST00000489444 KIF15Q9NS87 1388 aa7.42□□□□□ -1.22
GBP3-207ENST00000489444 CEBPAP49715 358 aaPredicted RBP7.42□□□□□ -1.22
GBP3-207ENST00000489444 CNKSR2Q8WXI2 1034 aa7.42□□□□□ -1.22
GBP3-207ENST00000489444 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.41□□□□□ -1.22
GBP3-207ENST00000489444 PTPRKQ15262 1439 aa7.41□□□□□ -1.22
GBP3-207ENST00000489444 MROH1Q8NDA8 1641 aa7.41□□□□□ -1.22
GBP3-207ENST00000489444 PRDM15P57071 1507 aaPredicted RBP7.41□□□□□ -1.22
GBP3-207ENST00000489444 ZNF142P52746 1687 aaPredicted RBP7.41□□□□□ -1.22
GBP3-207ENST00000489444 PZPP20742 1482 aa7.41□□□□□ -1.22
GBP3-207ENST00000489444 DEPDC5O75140 1603 aa7.4□□□□□ -1.22
GBP3-207ENST00000489444 ABCC3O15438 1527 aa7.4□□□□□ -1.22
GBP3-207ENST00000489444 FAM50AQ14320 339 aaKnown RBP7.4□□□□□ -1.22
GBP3-207ENST00000489444 MYO3AQ8NEV4 1616 aa7.4□□□□□ -1.22
GBP3-207ENST00000489444 NCOA1Q15788 1441 aa7.39□□□□□ -1.23
GBP3-207ENST00000489444 WASHC2CQ9Y4E1 1318 aa7.39□□□□□ -1.23
GBP3-207ENST00000489444 RRP7BPQ9NSQ0 103 aa7.39□□□□□ -1.23
GBP3-207ENST00000489444 ROCK1Q13464 1354 aa7.39□□□□□ -1.23
GBP3-207ENST00000489444 FKBP8Q14318 412 aa7.38□□□□□ -1.23
GBP3-207ENST00000489444 CAMSAP1Q5T5Y3 1602 aa7.38□□□□□ -1.23
GBP3-207ENST00000489444 KANK1Q14678 1352 aa7.38□□□□□ -1.23
GBP3-207ENST00000489444 SETD1BQ9UPS6 1966 aaKnown RBP7.38□□□□□ -1.23
GBP3-207ENST00000489444 CEP170BQ9Y4F5 1589 aaPredicted RBP7.38□□□□□ -1.23
GBP3-207ENST00000489444 RRBP1Q9P2E9 1410 aaKnown RBP7.37□□□□□ -1.23
GBP3-207ENST00000489444 LMTK2Q8IWU2 1503 aa7.37□□□□□ -1.23
GBP3-207ENST00000489444 CHIC2Q9UKJ5 165 aa7.37□□□□□ -1.23
GBP3-207ENST00000489444 TNRQ92752 1358 aa7.37□□□□□ -1.23
GBP3-207ENST00000489444 A2ML1A8K2U0 1454 aa7.37□□□□□ -1.23
GBP3-207ENST00000489444 VWDEQ8N2E2 1590 aa7.37□□□□□ -1.23
GBP3-207ENST00000489444 CEP152O94986 1710 aa7.37□□□□□ -1.23
GBP3-207ENST00000489444 HSPA2P54652 639 aa7.37□□□□□ -1.23
GBP3-207ENST00000489444 ARHGAP31Q2M1Z3 1444 aa7.37□□□□□ -1.23
GBP3-207ENST00000489444 NLRP1Q9C000 1473 aa7.37□□□□□ -1.23
GBP3-207ENST00000489444 SPATA31D1Q6ZQQ2 1576 aa7.36□□□□□ -1.23
GBP3-207ENST00000489444 PLA2R1Q13018 1463 aa7.36□□□□□ -1.23
GBP3-207ENST00000489444 ANKRD50Q9ULJ7 1429 aa7.36□□□□□ -1.23
GBP3-207ENST00000489444 DMRT2Q9Y5R5 561 aa7.36□□□□□ -1.23
GBP3-207ENST00000489444 UNC13BO14795 1591 aa7.35□□□□□ -1.23
GBP3-207ENST00000489444 ERVK-7P63135 1459 aa7.35□□□□□ -1.23
GBP3-207ENST00000489444 STRCQ7RTU9 1775 aa7.35□□□□□ -1.23
GBP3-207ENST00000489444 PTPRTO14522 1441 aa7.35□□□□□ -1.23
GBP3-207ENST00000489444 PPARGC1BQ86YN6 1023 aaKnown RBP7.34□□□□□ -1.23
GBP3-207ENST00000489444 EFCAB6Q5THR3 1501 aa7.33□□□□□ -1.24
GBP3-207ENST00000489444 FBXO31Q5XUX0 539 aaPredicted RBP7.33□□□□□ -1.24
GBP3-207ENST00000489444 TET3O43151 1660 aa7.32□□□□□ -1.24
GBP3-207ENST00000489444 RPRD2Q5VT52 1461 aaKnown RBP7.32□□□□□ -1.24
GBP3-207ENST00000489444 MYT1Q01538 1121 aa7.32□□□□□ -1.24
GBP3-207ENST00000489444 PKD2Q13563 968 aa7.32□□□□□ -1.24
GBP3-207ENST00000489444 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.32□□□□□ -1.24
GBP3-207ENST00000489444 UGGT1Q9NYU2 1555 aa7.32□□□□□ -1.24
GBP3-207ENST00000489444 GCC2Q8IWJ2 1684 aa7.32□□□□□ -1.24
GBP3-207ENST00000489444 IQGAP3Q86VI3 1631 aa7.32□□□□□ -1.24
GBP3-207ENST00000489444 POLR1AO95602 1720 aaPredicted RBP7.31□□□□□ -1.24
GBP3-207ENST00000489444 KDM5AP29375 1690 aaKnown RBP7.31□□□□□ -1.24
GBP3-207ENST00000489444 ITGAEP38570 1179 aa7.3□□□□□ -1.24
GBP3-207ENST00000489444 THEMISQ8N1K5 641 aaPredicted RBP7.3□□□□□ -1.24
GBP3-207ENST00000489444 NOS1P29475 1434 aa7.3□□□□□ -1.24
GBP3-207ENST00000489444 UBR1Q8IWV7 1749 aa7.3□□□□□ -1.24
GBP3-207ENST00000489444 SYNMO15061 1565 aa7.29□□□□□ -1.24
GBP3-207ENST00000489444 NCKAP5LQ9HCH0 1330 aa7.29□□□□□ -1.24
GBP3-207ENST00000489444 NEURL4Q96JN8 1562 aa7.29□□□□□ -1.24
GBP3-207ENST00000489444 HFM1A2PYH4 1435 aa7.28□□□□□ -1.24
GBP3-207ENST00000489444 MED14O60244 1454 aa7.28□□□□□ -1.24
GBP3-207ENST00000489444 PIK3C2BO00750 1634 aa7.28□□□□□ -1.24
GBP3-207ENST00000489444 ADGRB3O60242 1522 aa7.28□□□□□ -1.24
GBP3-207ENST00000489444 SLIT1O75093 1534 aa7.28□□□□□ -1.24
GBP3-207ENST00000489444 NAIPQ13075 1403 aa7.28□□□□□ -1.24
GBP3-207ENST00000489444 E9PCH4 1651 aa7.27□□□□□ -1.24
GBP3-207ENST00000489444 ANKLE2Q86XL3 938 aa7.27□□□□□ -1.24
GBP3-207ENST00000489444 IQSEC2Q5JU85 1478 aa7.27□□□□□ -1.25
GBP3-207ENST00000489444 ARHGAP23Q9P227 1491 aa7.27□□□□□ -1.25
GBP3-207ENST00000489444 NUP155O75694 1391 aa7.27□□□□□ -1.25
GBP3-207ENST00000489444 SLC52A1Q9NWF4 448 aa7.26□□□□□ -1.25
GBP3-207ENST00000489444 LTBP4Q8N2S1 1624 aa7.26□□□□□ -1.25
GBP3-207ENST00000489444 IQGAP1P46940 1657 aa7.26□□□□□ -1.25
GBP3-207ENST00000489444 NPHP4O75161 1426 aaPredicted RBP7.26□□□□□ -1.25
GBP3-207ENST00000489444 CERKQ8TCT0 537 aa7.26□□□□□ -1.25
GBP3-207ENST00000489444 SCAF11Q99590 1463 aaKnown RBP7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms