RNA–Protein interactions for RNA: ENST00000489417.5

SND1-214, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-214ENST00000489417 MAGI2Q86UL8 1455 aa30.63■■■□□ 2.49
SND1-214ENST00000489417 YEATS2Q9ULM3 1422 aa30.6■■■□□ 2.49
SND1-214ENST00000489417 SLC4A1APQ9BWU0 796 aaKnown RBP30.59■■■□□ 2.49
SND1-214ENST00000489417 DEPDC5O75140 1603 aa30.56■■■□□ 2.48
SND1-214ENST00000489417 FAM135AQ9P2D6 1515 aa30.54■■■□□ 2.48
SND1-214ENST00000489417 IQGAP3Q86VI3 1631 aa30.54■■■□□ 2.48
SND1-214ENST00000489417 KIF3BO15066 747 aa30.53■■■□□ 2.48
SND1-214ENST00000489417 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.53■■■□□ 2.48
SND1-214ENST00000489417 BCORL1Q5H9F3 1711 aa30.51■■■□□ 2.47
SND1-214ENST00000489417 ATP10AO60312 1499 aa30.5■■■□□ 2.47
SND1-214ENST00000489417 RNF17Q9BXT8 1623 aaKnown RBP30.49■■■□□ 2.47
SND1-214ENST00000489417 PRDM15P57071 1507 aaPredicted RBP30.48■■■□□ 2.47
SND1-214ENST00000489417 ARHGEF40Q8TER5 1519 aa30.48■■■□□ 2.47
SND1-214ENST00000489417 MROH1Q8NDA8 1641 aa30.47■■■□□ 2.47
SND1-214ENST00000489417 PKD2Q13563 968 aa30.47■■■□□ 2.47
SND1-214ENST00000489417 REREQ9P2R6 1566 aa30.46■■■□□ 2.47
SND1-214ENST00000489417 FOXD1Q16676 465 aa30.46■■■□□ 2.47
SND1-214ENST00000489417 KANK1Q14678 1352 aa30.45■■■□□ 2.46
SND1-214ENST00000489417 VWDEQ8N2E2 1590 aa30.44■■■□□ 2.46
SND1-214ENST00000489417 SIN3AQ96ST3 1273 aa30.44■■■□□ 2.46
SND1-214ENST00000489417 ANKRD30BQ9BXX2 1392 aa30.42■■■□□ 2.46
SND1-214ENST00000489417 NEUROD1Q13562 356 aa30.39■■■□□ 2.45
SND1-214ENST00000489417 AGLP35573 1532 aa30.37■■■□□ 2.45
SND1-214ENST00000489417 TET3O43151 1660 aa30.35■■■□□ 2.45
SND1-214ENST00000489417 GGT6Q6P531 493 aa30.33■■■□□ 2.45
SND1-214ENST00000489417 LMTK2Q8IWU2 1503 aa30.33■■■□□ 2.45
SND1-214ENST00000489417 CEP152O94986 1710 aa30.29■■■□□ 2.44
SND1-214ENST00000489417 TIMELESSQ9UNS1 1208 aa30.29■■■□□ 2.44
SND1-214ENST00000489417 SIGLEC1Q9BZZ2 1709 aa30.28■■■□□ 2.44
SND1-214ENST00000489417 E9PCH4 1651 aa30.28■■■□□ 2.44
SND1-214ENST00000489417 ABCC3O15438 1527 aa30.27■■■□□ 2.44
SND1-214ENST00000489417 RPRD2Q5VT52 1461 aaKnown RBP30.26■■■□□ 2.44
SND1-214ENST00000489417 EFCAB6Q5THR3 1501 aa30.26■■■□□ 2.43
SND1-214ENST00000489417 TONSLQ96HA7 1378 aa30.24■■■□□ 2.43
SND1-214ENST00000489417 ZC3H13Q5T200 1668 aaKnown RBP30.23■■■□□ 2.43
SND1-214ENST00000489417 WASHC2CQ9Y4E1 1318 aa30.22■■■□□ 2.43
SND1-214ENST00000489417 PLA2R1Q13018 1463 aa30.21■■■□□ 2.43
SND1-214ENST00000489417 CAMSAP1Q5T5Y3 1602 aa30.18■■■□□ 2.42
SND1-214ENST00000489417 PPP6R1Q9UPN7 881 aa30.16■■■□□ 2.42
SND1-214ENST00000489417 PTPRTO14522 1441 aa30.16■■■□□ 2.42
SND1-214ENST00000489417 SPHKAPQ2M3C7 1700 aa30.16■■■□□ 2.42
SND1-214ENST00000489417 CCDC144AA2RUR9 1427 aa30.15■■■□□ 2.42
SND1-214ENST00000489417 TRPM2O94759 1503 aa30.15■■■□□ 2.42
SND1-214ENST00000489417 NPATQ14207 1427 aa30.12■■■□□ 2.41
SND1-214ENST00000489417 ARID4BQ4LE39 1312 aaPredicted RBP30.11■■■□□ 2.41
SND1-214ENST00000489417 ARHGAP31Q2M1Z3 1444 aa30.1■■■□□ 2.41
SND1-214ENST00000489417 MLECQ14165 292 aa30.1■■■□□ 2.41
SND1-214ENST00000489417 PPP1R15AO75807 674 aaPredicted RBP30.06■■■□□ 2.4
SND1-214ENST00000489417 L3MBTL2Q969R5 705 aa30.05■■■□□ 2.4
SND1-214ENST00000489417 CLTCQ00610 1675 aaKnown RBP30.05■■■□□ 2.4
SND1-214ENST00000489417 CLTCL1P53675 1640 aa30.03■■■□□ 2.4
SND1-214ENST00000489417 CNTLNQ9NXG0 1405 aa30.02■■■□□ 2.4
SND1-214ENST00000489417 NOS1P29475 1434 aa30■■■□□ 2.39
SND1-214ENST00000489417 ESF1Q9H501 851 aaKnown RBP29.97■■■□□ 2.39
SND1-214ENST00000489417 UGGT1Q9NYU2 1555 aa29.96■■■□□ 2.39
SND1-214ENST00000489417 PREX1Q8TCU6 1659 aa29.95■■■□□ 2.38
SND1-214ENST00000489417 SPATA31E1Q6ZUB1 1445 aa29.93■■■□□ 2.38
SND1-214ENST00000489417 SYNMO15061 1565 aa29.93■■■□□ 2.38
SND1-214ENST00000489417 CFAP65Q6ZU64 1925 aaKnown RBP29.92■■■□□ 2.38
SND1-214ENST00000489417 ERVK-7P63135 1459 aa29.91■■■□□ 2.38
SND1-214ENST00000489417 NEURL4Q96JN8 1562 aa29.91■■■□□ 2.38
SND1-214ENST00000489417 MROH2AA6NES4 1674 aa29.89■■■□□ 2.38
SND1-214ENST00000489417 PIK3C2BO00750 1634 aa29.89■■■□□ 2.37
SND1-214ENST00000489417 ZMYM3Q14202 1370 aa29.88■■■□□ 2.37
SND1-214ENST00000489417 RGL3Q3MIN7 710 aa29.88■■■□□ 2.37
SND1-214ENST00000489417 KIF1BO60333 1816 aa29.87■■■□□ 2.37
SND1-214ENST00000489417 SPATA31D1Q6ZQQ2 1576 aa29.86■■■□□ 2.37
SND1-214ENST00000489417 FBXO31Q5XUX0 539 aaPredicted RBP29.85■■■□□ 2.37
SND1-214ENST00000489417 FER1L4A9Z1Z3 1794 aa29.84■■■□□ 2.37
SND1-214ENST00000489417 DCAF11Q8TEB1 546 aa29.83■■■□□ 2.37
SND1-214ENST00000489417 ADGRB3O60242 1522 aa29.83■■■□□ 2.37
SND1-214ENST00000489417 SLC52A1Q9NWF4 448 aa29.82■■■□□ 2.36
SND1-214ENST00000489417 UHRF1BP1Q6BDS2 1440 aa29.82■■■□□ 2.36
SND1-214ENST00000489417 NBPF8Q3BBV2 869 aa29.81■■■□□ 2.36
SND1-214ENST00000489417 KDM2AQ9Y2K7 1162 aa29.79■■■□□ 2.36
SND1-214ENST00000489417 CHGAP10645 457 aaKnown RBP29.76■■■□□ 2.35
SND1-214ENST00000489417 IDI1Q13907 227 aa29.76■■■□□ 2.35
SND1-214ENST00000489417 ZNF326Q5BKZ1 582 aaKnown RBP29.75■■■□□ 2.35
SND1-214ENST00000489417 MADDQ8WXG6 1647 aa29.74■■■□□ 2.35
SND1-214ENST00000489417 PRAG1Q86YV5 1406 aa29.73■■■□□ 2.35
SND1-214ENST00000489417 ADAMTSL3P82987 1691 aa29.73■■■□□ 2.35
SND1-214ENST00000489417 STAC3Q96MF2 364 aa29.72■■■□□ 2.35
SND1-214ENST00000489417 C3P01024 1663 aa29.72■■■□□ 2.35
SND1-214ENST00000489417 ZNF316A6NFI3 1004 aaPredicted RBP29.71■■■□□ 2.35
SND1-214ENST00000489417 TNRQ92752 1358 aa29.7■■■□□ 2.35
SND1-214ENST00000489417 IFT172Q9UG01 1749 aa29.69■■■□□ 2.34
SND1-214ENST00000489417 RALGAPBQ86X10 1494 aa29.69■■■□□ 2.34
SND1-214ENST00000489417 TMEM131LA2VDJ0 1609 aa29.69■■■□□ 2.34
SND1-214ENST00000489417 RIMS1Q86UR5 1692 aaKnown RBP29.68■■■□□ 2.34
SND1-214ENST00000489417 MYOM2P54296 1465 aa29.68■■■□□ 2.34
SND1-214ENST00000489417 RPGRIP1LQ68CZ1 1315 aa29.66■■■□□ 2.34
SND1-214ENST00000489417 CEBPAP49715 358 aaPredicted RBP29.65■■■□□ 2.34
SND1-214ENST00000489417 PPLO60437 1756 aa29.63■■■□□ 2.33
SND1-214ENST00000489417 TRPM1Q7Z4N2 1603 aa29.63■■■□□ 2.33
SND1-214ENST00000489417 MYO5BQ9ULV0 1848 aa29.6■■■□□ 2.33
SND1-214ENST00000489417 NEXMIFQ5QGS0 1516 aa29.6■■■□□ 2.33
SND1-214ENST00000489417 STAG3Q9UJ98 1225 aa29.6■■■□□ 2.33
SND1-214ENST00000489417 A2ML1A8K2U0 1454 aa29.58■■■□□ 2.33
SND1-214ENST00000489417 NLRP1Q9C000 1473 aa29.58■■■□□ 2.33
SND1-214ENST00000489417 NRXN1Q9ULB1 1477 aa29.58■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms