RNA–Protein interactions for RNA: ENST00000489365.1

PRDM1-207, Transcript of PR/SET domain 1, humanhuman

TSL 3

Gene PRDM1, Length 649 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-207ENST00000489365 HAX1O00165 279 aa7.97□□□□□ -1.13
PRDM1-207ENST00000489365 LRRIQ1Q96JM4 1722 aa7.97□□□□□ -1.13
PRDM1-207ENST00000489365 ITSN2Q9NZM3 1697 aa7.96□□□□□ -1.13
PRDM1-207ENST00000489365 CDC42BPAQ5VT25 1732 aa7.96□□□□□ -1.14
PRDM1-207ENST00000489365 HSPA2P54652 639 aa7.96□□□□□ -1.14
PRDM1-207ENST00000489365 DIP2CQ9Y2E4 1556 aa7.96□□□□□ -1.14
PRDM1-207ENST00000489365 CEP162Q5TB80 1403 aa7.95□□□□□ -1.14
PRDM1-207ENST00000489365 KIAA1107Q9UPP5 1409 aa7.95□□□□□ -1.14
PRDM1-207ENST00000489365 TRAPPC8Q9Y2L5 1435 aa7.95□□□□□ -1.14
PRDM1-207ENST00000489365 AGLP35573 1532 aa7.95□□□□□ -1.14
PRDM1-207ENST00000489365 EHBP1L1Q8N3D4 1523 aa7.95□□□□□ -1.14
PRDM1-207ENST00000489365 SYCP2Q9BX26 1530 aa7.95□□□□□ -1.14
PRDM1-207ENST00000489365 GPATCH8Q9UKJ3 1502 aaKnown RBP7.95□□□□□ -1.14
PRDM1-207ENST00000489365 PRR29P0C7W0 189 aa7.95□□□□□ -1.14
PRDM1-207ENST00000489365 PREX1Q8TCU6 1659 aa7.95□□□□□ -1.14
PRDM1-207ENST00000489365 ABCA6Q8N139 1617 aa7.94□□□□□ -1.14
PRDM1-207ENST00000489365 HNRNPMP52272 730 aaKnown RBP eCLIP7.94□□□□□ -1.14
PRDM1-207ENST00000489365 SETD1BQ9UPS6 1966 aaKnown RBP7.93□□□□□ -1.14
PRDM1-207ENST00000489365 CEBPAP49715 358 aaPredicted RBP7.93□□□□□ -1.14
PRDM1-207ENST00000489365 RSPH4AQ5TD94 716 aa7.93□□□□□ -1.14
PRDM1-207ENST00000489365 IFNLR1Q8IU57 520 aaPredicted RBP7.93□□□□□ -1.14
PRDM1-207ENST00000489365 MIER1Q8N108 512 aa7.93□□□□□ -1.14
PRDM1-207ENST00000489365 ATP7AQ04656 1500 aa7.93□□□□□ -1.14
PRDM1-207ENST00000489365 SAMD9LQ8IVG5 1584 aa7.93□□□□□ -1.14
PRDM1-207ENST00000489365 PLCD3Q8N3E9 789 aa7.92□□□□□ -1.14
PRDM1-207ENST00000489365 A2MP01023 1474 aa7.92□□□□□ -1.14
PRDM1-207ENST00000489365 SIGLEC1Q9BZZ2 1709 aa7.92□□□□□ -1.14
PRDM1-207ENST00000489365 TSPY4P0CV99 314 aa7.91□□□□□ -1.14
PRDM1-207ENST00000489365 TSPY10P0CW01 314 aa7.91□□□□□ -1.14
PRDM1-207ENST00000489365 GGT6Q6P531 493 aa7.91□□□□□ -1.14
PRDM1-207ENST00000489365 SUPT6HQ7KZ85 1726 aaKnown RBP7.91□□□□□ -1.14
PRDM1-207ENST00000489365 KIDINS220Q9ULH0 1771 aa7.91□□□□□ -1.14
PRDM1-207ENST00000489365 NPATQ14207 1427 aa7.9□□□□□ -1.14
PRDM1-207ENST00000489365 ZMYM3Q14202 1370 aa7.89□□□□□ -1.15
PRDM1-207ENST00000489365 CERKQ8TCT0 537 aa7.89□□□□□ -1.15
PRDM1-207ENST00000489365 CREBZFQ9NS37 354 aa7.89□□□□□ -1.15
PRDM1-207ENST00000489365 MROH2AA6NES4 1674 aa7.89□□□□□ -1.15
PRDM1-207ENST00000489365 C3P01024 1663 aa7.89□□□□□ -1.15
PRDM1-207ENST00000489365 ADGBQ8N7X0 1667 aa7.89□□□□□ -1.15
PRDM1-207ENST00000489365 TIAM1Q13009 1591 aa7.88□□□□□ -1.15
PRDM1-207ENST00000489365 INO80Q9ULG1 1556 aaPredicted RBP7.88□□□□□ -1.15
PRDM1-207ENST00000489365 CCDC141Q6ZP82 1450 aa7.88□□□□□ -1.15
PRDM1-207ENST00000489365 RTEL1-TNFRSF6BF6WH68 1400 aa7.88□□□□□ -1.15
PRDM1-207ENST00000489365 VPS8Q8N3P4 1428 aa7.88□□□□□ -1.15
PRDM1-207ENST00000489365 NCOA2Q15596 1464 aa7.87□□□□□ -1.15
PRDM1-207ENST00000489365 PLEKHG5O94827 1062 aa7.87□□□□□ -1.15
PRDM1-207ENST00000489365 CAMSAP2Q08AD1 1489 aa7.87□□□□□ -1.15
PRDM1-207ENST00000489365 PTPRTO14522 1441 aa7.86□□□□□ -1.15
PRDM1-207ENST00000489365 ZNF644Q9H582 1327 aaPredicted RBP7.86□□□□□ -1.15
PRDM1-207ENST00000489365 WASHC2CQ9Y4E1 1318 aa7.86□□□□□ -1.15
PRDM1-207ENST00000489365 PLXNC1O60486 1568 aa7.86□□□□□ -1.15
PRDM1-207ENST00000489365 KIF3BO15066 747 aa7.86□□□□□ -1.15
PRDM1-207ENST00000489365 DHX29Q7Z478 1369 aaKnown RBP7.85□□□□□ -1.15
PRDM1-207ENST00000489365 FAM135AQ9P2D6 1515 aa7.85□□□□□ -1.15
PRDM1-207ENST00000489365 PKD2Q13563 968 aa7.85□□□□□ -1.15
PRDM1-207ENST00000489365 KLHL34Q8N239 644 aa7.85□□□□□ -1.15
PRDM1-207ENST00000489365 CLTCQ00610 1675 aaKnown RBP7.85□□□□□ -1.15
PRDM1-207ENST00000489365 LRRC9Q6ZRR7 1453 aa7.84□□□□□ -1.15
PRDM1-207ENST00000489365 MBD5Q9P267 1494 aa7.84□□□□□ -1.15
PRDM1-207ENST00000489365 NCOA1Q15788 1441 aa7.84□□□□□ -1.15
PRDM1-207ENST00000489365 MAP3K1Q13233 1512 aa7.83□□□□□ -1.16
PRDM1-207ENST00000489365 KDM5DQ9BY66 1539 aa7.83□□□□□ -1.16
PRDM1-207ENST00000489365 CAMSAP1Q5T5Y3 1602 aa7.83□□□□□ -1.16
PRDM1-207ENST00000489365 LOC105371045A0A1W2PR82 267 aa7.83□□□□□ -1.16
PRDM1-207ENST00000489365 ZBTB47Q9UFB7 747 aaPredicted RBP7.83□□□□□ -1.16
PRDM1-207ENST00000489365 MIA2Q96PC5 1412 aa7.83□□□□□ -1.16
PRDM1-207ENST00000489365 ARHGEF5Q12774 1597 aa7.83□□□□□ -1.16
PRDM1-207ENST00000489365 MNX1P50219 401 aaPredicted RBP7.82□□□□□ -1.16
PRDM1-207ENST00000489365 CHADLQ6NUI6 762 aa7.82□□□□□ -1.16
PRDM1-207ENST00000489365 CEP170BQ9Y4F5 1589 aaPredicted RBP7.82□□□□□ -1.16
PRDM1-207ENST00000489365 TNRQ92752 1358 aa7.82□□□□□ -1.16
PRDM1-207ENST00000489365 STRCQ7RTU9 1775 aa7.82□□□□□ -1.16
PRDM1-207ENST00000489365 MYO3AQ8NEV4 1616 aa7.81□□□□□ -1.16
PRDM1-207ENST00000489365 PLA2R1Q13018 1463 aa7.81□□□□□ -1.16
PRDM1-207ENST00000489365 PTPRKQ15262 1439 aa7.81□□□□□ -1.16
PRDM1-207ENST00000489365 MYOM3Q5VTT5 1437 aa7.81□□□□□ -1.16
PRDM1-207ENST00000489365 PRKAR2AP13861 404 aaKnown RBP7.81□□□□□ -1.16
PRDM1-207ENST00000489365 AMER1Q5JTC6 1135 aaPredicted RBP7.81□□□□□ -1.16
PRDM1-207ENST00000489365 THEMISQ8N1K5 641 aaPredicted RBP7.81□□□□□ -1.16
PRDM1-207ENST00000489365 SPOCK2Q92563 424 aa7.81□□□□□ -1.16
PRDM1-207ENST00000489365 IQSEC2Q5JU85 1478 aa7.81□□□□□ -1.16
PRDM1-207ENST00000489365 ZNF142P52746 1687 aaPredicted RBP7.8□□□□□ -1.16
PRDM1-207ENST00000489365 RTN4Q9NQC3 1192 aaKnown RBP7.8□□□□□ -1.16
PRDM1-207ENST00000489365 A2ML1A8K2U0 1454 aa7.8□□□□□ -1.16
PRDM1-207ENST00000489365 PZPP20742 1482 aa7.8□□□□□ -1.16
PRDM1-207ENST00000489365 NCKAP5LQ9HCH0 1330 aa7.79□□□□□ -1.16
PRDM1-207ENST00000489365 EVX2Q03828 476 aa7.79□□□□□ -1.16
PRDM1-207ENST00000489365 ANKLE2Q86XL3 938 aa7.79□□□□□ -1.16
PRDM1-207ENST00000489365 KANK1Q14678 1352 aa7.79□□□□□ -1.16
PRDM1-207ENST00000489365 NLRP1Q9C000 1473 aa7.79□□□□□ -1.16
PRDM1-207ENST00000489365 ZC3H13Q5T200 1668 aaKnown RBP7.78□□□□□ -1.16
PRDM1-207ENST00000489365 EIF2AK4Q9P2K8 1649 aaKnown RBP7.78□□□□□ -1.16
PRDM1-207ENST00000489365 DUOX2Q9NRD8 1548 aa7.78□□□□□ -1.16
PRDM1-207ENST00000489365 MAST1Q9Y2H9 1570 aa7.77□□□□□ -1.17
PRDM1-207ENST00000489365 KIF15Q9NS87 1388 aa7.77□□□□□ -1.17
PRDM1-207ENST00000489365 UBAP1LF5GYI3 381 aa7.77□□□□□ -1.17
PRDM1-207ENST00000489365 SHANK2Q9UPX8 1470 aa7.76□□□□□ -1.17
PRDM1-207ENST00000489365 ANKRD30AQ9BXX3 1397 aa7.76□□□□□ -1.17
PRDM1-207ENST00000489365 KANK4Q5T7N3 995 aaPredicted RBP7.76□□□□□ -1.17
PRDM1-207ENST00000489365 FARP1Q9Y4F1 1045 aaPredicted RBP7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms