RNA–Protein interactions for RNA: ENST00000489313.1

PTP4A2-206, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 2

Gene PTP4A2, Length 1,551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-206ENST00000489313 UBAP1LF5GYI3 381 aa17.45■□□□□ 0.38
PTP4A2-206ENST00000489313 EHBP1L1Q8N3D4 1523 aa17.44■□□□□ 0.38
PTP4A2-206ENST00000489313 DNMT1P26358 1616 aaKnown RBP17.42■□□□□ 0.38
PTP4A2-206ENST00000489313 A2ML1A8K2U0 1454 aa17.41■□□□□ 0.38
PTP4A2-206ENST00000489313 CEP162Q5TB80 1403 aa17.41■□□□□ 0.38
PTP4A2-206ENST00000489313 DHX29Q7Z478 1369 aaKnown RBP17.4■□□□□ 0.38
PTP4A2-206ENST00000489313 RTEL1-TNFRSF6BF6WH68 1400 aa17.4■□□□□ 0.38
PTP4A2-206ENST00000489313 POLR1AO95602 1720 aaPredicted RBP17.38■□□□□ 0.37
PTP4A2-206ENST00000489313 FBXO31Q5XUX0 539 aaPredicted RBP17.38■□□□□ 0.37
PTP4A2-206ENST00000489313 KIF3BO15066 747 aa17.37■□□□□ 0.37
PTP4A2-206ENST00000489313 CCDC141Q6ZP82 1450 aa17.37■□□□□ 0.37
PTP4A2-206ENST00000489313 TNRQ92752 1358 aa17.36■□□□□ 0.37
PTP4A2-206ENST00000489313 CAMSAP2Q08AD1 1489 aa17.35■□□□□ 0.37
PTP4A2-206ENST00000489313 KDM5DQ9BY66 1539 aa17.35■□□□□ 0.37
PTP4A2-206ENST00000489313 NCOA2Q15596 1464 aa17.35■□□□□ 0.37
PTP4A2-206ENST00000489313 NEURL4Q96JN8 1562 aa17.35■□□□□ 0.37
PTP4A2-206ENST00000489313 PZPP20742 1482 aa17.34■□□□□ 0.37
PTP4A2-206ENST00000489313 WASHC2CQ9Y4E1 1318 aa17.32■□□□□ 0.36
PTP4A2-206ENST00000489313 SCAF1Q9H7N4 1312 aaKnown RBP17.32■□□□□ 0.36
PTP4A2-206ENST00000489313 FAM135AQ9P2D6 1515 aa17.31■□□□□ 0.36
PTP4A2-206ENST00000489313 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.3■□□□□ 0.36
PTP4A2-206ENST00000489313 PIP4K2BP78356 416 aa17.29■□□□□ 0.36
PTP4A2-206ENST00000489313 SHANK2Q9UPX8 1470 aa17.29■□□□□ 0.36
PTP4A2-206ENST00000489313 CPS1P31327 1500 aa17.29■□□□□ 0.36
PTP4A2-206ENST00000489313 ARHGEF5Q12774 1597 aa17.28■□□□□ 0.36
PTP4A2-206ENST00000489313 HSPA1LP34931 641 aa17.28■□□□□ 0.36
PTP4A2-206ENST00000489313 RSPH4AQ5TD94 716 aa17.28■□□□□ 0.36
PTP4A2-206ENST00000489313 ANKLE2Q86XL3 938 aa17.28■□□□□ 0.36
PTP4A2-206ENST00000489313 MIA2Q96PC5 1412 aa17.27■□□□□ 0.36
PTP4A2-206ENST00000489313 UGGT1Q9NYU2 1555 aa17.27■□□□□ 0.35
PTP4A2-206ENST00000489313 NLRP1Q9C000 1473 aa17.26■□□□□ 0.35
PTP4A2-206ENST00000489313 VWDEQ8N2E2 1590 aa17.26■□□□□ 0.35
PTP4A2-206ENST00000489313 THEMISQ8N1K5 641 aaPredicted RBP17.26■□□□□ 0.35
PTP4A2-206ENST00000489313 TOM1O60784 492 aa17.25■□□□□ 0.35
PTP4A2-206ENST00000489313 TSPY4P0CV99 314 aa17.25■□□□□ 0.35
PTP4A2-206ENST00000489313 TSPY10P0CW01 314 aa17.25■□□□□ 0.35
PTP4A2-206ENST00000489313 DEPDC5O75140 1603 aa17.23■□□□□ 0.35
PTP4A2-206ENST00000489313 RNF17Q9BXT8 1623 aaKnown RBP17.23■□□□□ 0.35
PTP4A2-206ENST00000489313 NPHP4O75161 1426 aaPredicted RBP17.23■□□□□ 0.35
PTP4A2-206ENST00000489313 MED1Q15648 1581 aaPredicted RBP17.22■□□□□ 0.35
PTP4A2-206ENST00000489313 MED14O60244 1454 aa17.22■□□□□ 0.35
PTP4A2-206ENST00000489313 ABCC3O15438 1527 aa17.22■□□□□ 0.35
PTP4A2-206ENST00000489313 IQGAP1P46940 1657 aa17.22■□□□□ 0.35
PTP4A2-206ENST00000489313 CFAP65Q6ZU64 1925 aaKnown RBP17.22■□□□□ 0.35
PTP4A2-206ENST00000489313 LRRC9Q6ZRR7 1453 aa17.21■□□□□ 0.35
PTP4A2-206ENST00000489313 ZC3H13Q5T200 1668 aaKnown RBP17.2■□□□□ 0.34
PTP4A2-206ENST00000489313 ALKQ9UM73 1620 aa17.2■□□□□ 0.34
PTP4A2-206ENST00000489313 MAST1Q9Y2H9 1570 aa17.2■□□□□ 0.34
PTP4A2-206ENST00000489313 STRCP1A6NGW2 1772 aa17.19■□□□□ 0.34
PTP4A2-206ENST00000489313 CEP152O94986 1710 aa17.18■□□□□ 0.34
PTP4A2-206ENST00000489313 MROH1Q8NDA8 1641 aa17.18■□□□□ 0.34
PTP4A2-206ENST00000489313 EIF2AK4Q9P2K8 1649 aaKnown RBP17.17■□□□□ 0.34
PTP4A2-206ENST00000489313 ERVK-7P63135 1459 aa17.17■□□□□ 0.34
PTP4A2-206ENST00000489313 VPS8Q8N3P4 1428 aa17.17■□□□□ 0.34
PTP4A2-206ENST00000489313 KANK4Q5T7N3 995 aaPredicted RBP17.15■□□□□ 0.34
PTP4A2-206ENST00000489313 UBR1Q8IWV7 1749 aa17.14■□□□□ 0.33
PTP4A2-206ENST00000489313 LRRC7Q96NW7 1537 aa17.14■□□□□ 0.33
PTP4A2-206ENST00000489313 LOC105371045A0A1W2PR82 267 aa17.12■□□□□ 0.33
PTP4A2-206ENST00000489313 SYNMO15061 1565 aa17.12■□□□□ 0.33
PTP4A2-206ENST00000489313 MYOM3Q5VTT5 1437 aa17.12■□□□□ 0.33
PTP4A2-206ENST00000489313 POTEHQ6S545 545 aa17.11■□□□□ 0.33
PTP4A2-206ENST00000489313 DUOX2Q9NRD8 1548 aa17.11■□□□□ 0.33
PTP4A2-206ENST00000489313 SCAF11Q99590 1463 aaKnown RBP17.1■□□□□ 0.33
PTP4A2-206ENST00000489313 MAP3K1Q13233 1512 aa17.08■□□□□ 0.33
PTP4A2-206ENST00000489313 LTKP29376 864 aa17.08■□□□□ 0.32
PTP4A2-206ENST00000489313 KIF15Q9NS87 1388 aa17.07■□□□□ 0.32
PTP4A2-206ENST00000489313 PRDM15P57071 1507 aaPredicted RBP17.07■□□□□ 0.32
PTP4A2-206ENST00000489313 CROCC2H7BZ55 1655 aa17.07■□□□□ 0.32
PTP4A2-206ENST00000489313 TXNDC2Q86VQ3 553 aa17.06■□□□□ 0.32
PTP4A2-206ENST00000489313 ARHGAP23Q9P227 1491 aa17.06■□□□□ 0.32
PTP4A2-206ENST00000489313 XIRP1Q702N8 1843 aaKnown RBP17.06■□□□□ 0.32
PTP4A2-206ENST00000489313 RRP7BPQ9NSQ0 103 aa17.06■□□□□ 0.32
PTP4A2-206ENST00000489313 SLIT1O75093 1534 aa17.06■□□□□ 0.32
PTP4A2-206ENST00000489313 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.05■□□□□ 0.32
PTP4A2-206ENST00000489313 ARHGAP31Q2M1Z3 1444 aa17.04■□□□□ 0.32
PTP4A2-206ENST00000489313 PIK3C2BO00750 1634 aa17.04■□□□□ 0.32
PTP4A2-206ENST00000489313 ABCC5O15440 1437 aa17.04■□□□□ 0.32
PTP4A2-206ENST00000489313 PTPN23Q9H3S7 1636 aa17.03■□□□□ 0.32
PTP4A2-206ENST00000489313 ERBINQ96RT1 1412 aa17.03■□□□□ 0.32
PTP4A2-206ENST00000489313 EID1Q9Y6B2 187 aa17.02■□□□□ 0.31
PTP4A2-206ENST00000489313 TMEM2Q9UHN6 1383 aa16.99■□□□□ 0.31
PTP4A2-206ENST00000489313 DAPK1P53355 1430 aa16.99■□□□□ 0.31
PTP4A2-206ENST00000489313 STAG3Q9UJ98 1225 aa16.99■□□□□ 0.31
PTP4A2-206ENST00000489313 KANK1Q14678 1352 aa16.97■□□□□ 0.31
PTP4A2-206ENST00000489313 CHIC2Q9UKJ5 165 aa16.97■□□□□ 0.31
PTP4A2-206ENST00000489313 EFCAB6Q5THR3 1501 aa16.96■□□□□ 0.31
PTP4A2-206ENST00000489313 KDM5AP29375 1690 aaKnown RBP16.95■□□□□ 0.3
PTP4A2-206ENST00000489313 IDI1Q13907 227 aa16.95■□□□□ 0.3
PTP4A2-206ENST00000489313 FGD6Q6ZV73 1430 aa16.95■□□□□ 0.3
PTP4A2-206ENST00000489313 RGS17Q9UGC6 210 aaPredicted RBP16.94■□□□□ 0.3
PTP4A2-206ENST00000489313 LMTK2Q8IWU2 1503 aa16.94■□□□□ 0.3
PTP4A2-206ENST00000489313 APLP2Q06481 763 aa16.94■□□□□ 0.3
PTP4A2-206ENST00000489313 SLC26A8Q96RN1 970 aa16.94■□□□□ 0.3
PTP4A2-206ENST00000489313 TMEM94Q12767 1356 aa16.93■□□□□ 0.3
PTP4A2-206ENST00000489313 RBM33Q96EV2 1170 aaKnown RBP16.93■□□□□ 0.3
PTP4A2-206ENST00000489313 ANKRD30AQ9BXX3 1397 aa16.93■□□□□ 0.3
PTP4A2-206ENST00000489313 TET3O43151 1660 aa16.92■□□□□ 0.3
PTP4A2-206ENST00000489313 FAM135BQ49AJ0 1406 aa16.91■□□□□ 0.3
PTP4A2-206ENST00000489313 ROBO1Q9Y6N7 1651 aa16.91■□□□□ 0.3
PTP4A2-206ENST00000489313 KCNA6P17658 529 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms