RNA–Protein interactions for RNA: ENST00000489303.1

LMO4-203, Transcript of LIM domain only 4, humanhuman

TSL 2

Gene LMO4, Length 952 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-203ENST00000489303 CEP170BQ9Y4F5 1589 aaPredicted RBP20.98■□□□□ 0.95
LMO4-203ENST00000489303 ZNF142P52746 1687 aaPredicted RBP20.98■□□□□ 0.95
LMO4-203ENST00000489303 ARHGEF5Q12774 1597 aa20.95■□□□□ 0.94
LMO4-203ENST00000489303 PPP6R1Q9UPN7 881 aa20.95■□□□□ 0.94
LMO4-203ENST00000489303 ZNF335Q9H4Z2 1342 aaPredicted RBP20.94■□□□□ 0.94
LMO4-203ENST00000489303 DNMT1P26358 1616 aaKnown RBP20.91■□□□□ 0.94
LMO4-203ENST00000489303 TCOF1Q13428 1488 aaKnown RBP20.91■□□□□ 0.94
LMO4-203ENST00000489303 KDM5DQ9BY66 1539 aa20.89■□□□□ 0.94
LMO4-203ENST00000489303 A2ML1A8K2U0 1454 aa20.89■□□□□ 0.94
LMO4-203ENST00000489303 PLA2R1Q13018 1463 aa20.89■□□□□ 0.94
LMO4-203ENST00000489303 FGD6Q6ZV73 1430 aa20.88■□□□□ 0.93
LMO4-203ENST00000489303 WASHC2CQ9Y4E1 1318 aa20.88■□□□□ 0.93
LMO4-203ENST00000489303 TNRQ92752 1358 aa20.87■□□□□ 0.93
LMO4-203ENST00000489303 PZPP20742 1482 aa20.87■□□□□ 0.93
LMO4-203ENST00000489303 PKD2Q13563 968 aa20.86■□□□□ 0.93
LMO4-203ENST00000489303 PTPN23Q9H3S7 1636 aa20.85■□□□□ 0.93
LMO4-203ENST00000489303 MAST1Q9Y2H9 1570 aa20.85■□□□□ 0.93
LMO4-203ENST00000489303 NEURL4Q96JN8 1562 aa20.82■□□□□ 0.92
LMO4-203ENST00000489303 RNF17Q9BXT8 1623 aaKnown RBP20.82■□□□□ 0.92
LMO4-203ENST00000489303 FAM50AQ14320 339 aaKnown RBP20.81■□□□□ 0.92
LMO4-203ENST00000489303 MROH1Q8NDA8 1641 aa20.81■□□□□ 0.92
LMO4-203ENST00000489303 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.81■□□□□ 0.921e-6■■■■■ 32.9
LMO4-203ENST00000489303 ABCC5O15440 1437 aa20.8■□□□□ 0.92
LMO4-203ENST00000489303 ABCC3O15438 1527 aa20.8■□□□□ 0.92
LMO4-203ENST00000489303 IQSEC2Q5JU85 1478 aa20.79■□□□□ 0.92
LMO4-203ENST00000489303 SHANK2Q9UPX8 1470 aa20.79■□□□□ 0.92
LMO4-203ENST00000489303 DAPK1P53355 1430 aa20.78■□□□□ 0.92
LMO4-203ENST00000489303 FAM135AQ9P2D6 1515 aa20.78■□□□□ 0.92
LMO4-203ENST00000489303 POLR1AO95602 1720 aaPredicted RBP20.78■□□□□ 0.92
LMO4-203ENST00000489303 CEP152O94986 1710 aa20.77■□□□□ 0.92
LMO4-203ENST00000489303 ILDR2Q71H61 639 aa20.76■□□□□ 0.91
LMO4-203ENST00000489303 RRP7BPQ9NSQ0 103 aa20.76■□□□□ 0.91
LMO4-203ENST00000489303 KIF15Q9NS87 1388 aa20.75■□□□□ 0.91
LMO4-203ENST00000489303 DISP3Q9P2K9 1392 aa20.75■□□□□ 0.91
LMO4-203ENST00000489303 UBAP1LF5GYI3 381 aa20.75■□□□□ 0.91
LMO4-203ENST00000489303 UGGT1Q9NYU2 1555 aa20.75■□□□□ 0.91
LMO4-203ENST00000489303 EIF2AK4Q9P2K8 1649 aaKnown RBP20.75■□□□□ 0.91
LMO4-203ENST00000489303 ANKRD30AQ9BXX3 1397 aa20.74■□□□□ 0.91
LMO4-203ENST00000489303 DUOX2Q9NRD8 1548 aa20.74■□□□□ 0.91
LMO4-203ENST00000489303 CHIC2Q9UKJ5 165 aa20.74■□□□□ 0.91
LMO4-203ENST00000489303 CFAP65Q6ZU64 1925 aaKnown RBP20.74■□□□□ 0.91
LMO4-203ENST00000489303 PPARGC1BQ86YN6 1023 aaKnown RBP20.73■□□□□ 0.91
LMO4-203ENST00000489303 SPATA31D1Q6ZQQ2 1576 aa20.72■□□□□ 0.91
LMO4-203ENST00000489303 ERVK-7P63135 1459 aa20.72■□□□□ 0.91
LMO4-203ENST00000489303 NLRP1Q9C000 1473 aa20.72■□□□□ 0.91
LMO4-203ENST00000489303 CROCC2H7BZ55 1655 aa20.72■□□□□ 0.91
LMO4-203ENST00000489303 ZC3H13Q5T200 1668 aaKnown RBP20.71■□□□□ 0.91
LMO4-203ENST00000489303 ANKLE2Q86XL3 938 aa20.71■□□□□ 0.91
LMO4-203ENST00000489303 THEMISQ8N1K5 641 aaPredicted RBP20.71■□□□□ 0.91
LMO4-203ENST00000489303 ERBINQ96RT1 1412 aa20.7■□□□□ 0.9
LMO4-203ENST00000489303 VWDEQ8N2E2 1590 aa20.68■□□□□ 0.9
LMO4-203ENST00000489303 NPHP4O75161 1426 aaPredicted RBP20.68■□□□□ 0.9
LMO4-203ENST00000489303 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.67■□□□□ 0.9
LMO4-203ENST00000489303 MED14O60244 1454 aa20.65■□□□□ 0.9
LMO4-203ENST00000489303 STRCP1A6NGW2 1772 aa20.64■□□□□ 0.9
LMO4-203ENST00000489303 DEPDC5O75140 1603 aa20.64■□□□□ 0.9
LMO4-203ENST00000489303 PRDM15P57071 1507 aaPredicted RBP20.64■□□□□ 0.9
LMO4-203ENST00000489303 UBR1Q8IWV7 1749 aa20.64■□□□□ 0.89
LMO4-203ENST00000489303 KANK1Q14678 1352 aa20.63■□□□□ 0.89
LMO4-203ENST00000489303 IQGAP1P46940 1657 aa20.63■□□□□ 0.89
LMO4-203ENST00000489303 ADGRL2O95490 1459 aa20.62■□□□□ 0.89
LMO4-203ENST00000489303 PIP4K2BP78356 416 aa20.62■□□□□ 0.89
LMO4-203ENST00000489303 CPS1P31327 1500 aa20.62■□□□□ 0.89
LMO4-203ENST00000489303 SCAF1Q9H7N4 1312 aaKnown RBP20.61■□□□□ 0.89
LMO4-203ENST00000489303 LTKP29376 864 aa20.6■□□□□ 0.89
LMO4-203ENST00000489303 ALKQ9UM73 1620 aa20.6■□□□□ 0.89
LMO4-203ENST00000489303 ITGAEP38570 1179 aa20.59■□□□□ 0.89
LMO4-203ENST00000489303 HSPA1LP34931 641 aa20.58■□□□□ 0.89
LMO4-203ENST00000489303 ARHGAP31Q2M1Z3 1444 aa20.58■□□□□ 0.88
LMO4-203ENST00000489303 PIK3C2BO00750 1634 aa20.56■□□□□ 0.88
LMO4-203ENST00000489303 ANKRD50Q9ULJ7 1429 aa20.56■□□□□ 0.88
LMO4-203ENST00000489303 ROCK1Q13464 1354 aa20.55■□□□□ 0.88
LMO4-203ENST00000489303 TXNDC2Q86VQ3 553 aa20.54■□□□□ 0.88
LMO4-203ENST00000489303 SCAF11Q99590 1463 aaKnown RBP20.54■□□□□ 0.88
LMO4-203ENST00000489303 ARHGAP23Q9P227 1491 aa20.54■□□□□ 0.88
LMO4-203ENST00000489303 LRRC7Q96NW7 1537 aa20.53■□□□□ 0.88
LMO4-203ENST00000489303 SLIT1O75093 1534 aa20.53■□□□□ 0.88
LMO4-203ENST00000489303 TOM1O60784 492 aa20.52■□□□□ 0.88
LMO4-203ENST00000489303 SENP3Q9H4L4 574 aaPredicted RBP20.52■□□□□ 0.88
LMO4-203ENST00000489303 SYNMO15061 1565 aa20.51■□□□□ 0.87
LMO4-203ENST00000489303 IDI1Q13907 227 aa20.51■□□□□ 0.87
LMO4-203ENST00000489303 LMTK2Q8IWU2 1503 aa20.5■□□□□ 0.87
LMO4-203ENST00000489303 RRBP1Q9P2E9 1410 aaKnown RBP20.49■□□□□ 0.87
LMO4-203ENST00000489303 SOCS7O14512 581 aa20.48■□□□□ 0.87
LMO4-203ENST00000489303 TMEM2Q9UHN6 1383 aa20.47■□□□□ 0.87
LMO4-203ENST00000489303 EFCAB6Q5THR3 1501 aa20.46■□□□□ 0.87
LMO4-203ENST00000489303 NOS1P29475 1434 aa20.45■□□□□ 0.86
LMO4-203ENST00000489303 STAG3Q9UJ98 1225 aa20.45■□□□□ 0.86
LMO4-203ENST00000489303 XIRP1Q702N8 1843 aaKnown RBP20.45■□□□□ 0.86
LMO4-203ENST00000489303 EID1Q9Y6B2 187 aa20.43■□□□□ 0.86
LMO4-203ENST00000489303 MED1Q15648 1581 aaPredicted RBP20.42■□□□□ 0.86
LMO4-203ENST00000489303 RBM33Q96EV2 1170 aaKnown RBP20.41■□□□□ 0.86
LMO4-203ENST00000489303 SLC26A8Q96RN1 970 aa20.41■□□□□ 0.86
LMO4-203ENST00000489303 TET3O43151 1660 aa20.38■□□□□ 0.85
LMO4-203ENST00000489303 KDM5AP29375 1690 aaKnown RBP20.38■□□□□ 0.85
LMO4-203ENST00000489303 ADGRB3O60242 1522 aa20.38■□□□□ 0.85
LMO4-203ENST00000489303 NUP155O75694 1391 aa20.38■□□□□ 0.85
LMO4-203ENST00000489303 MYO5BQ9ULV0 1848 aa20.38■□□□□ 0.85
LMO4-203ENST00000489303 RPRD2Q5VT52 1461 aaKnown RBP20.37■□□□□ 0.85
LMO4-203ENST00000489303 SLC52A1Q9NWF4 448 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms