RNA–Protein interactions for RNA: ENST00000489198.1

MSRB1-204, Transcript of methionine sulfoxide reductase B1, humanhuman

TSL 3

Gene MSRB1, Length 709 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB1-204ENST00000489198 PTPRKQ15262 1439 aa18.84■□□□□ 0.61
MSRB1-204ENST00000489198 CROCC2H7BZ55 1655 aa18.84■□□□□ 0.61
MSRB1-204ENST00000489198 EIF2AK4Q9P2K8 1649 aaKnown RBP18.84■□□□□ 0.61
MSRB1-204ENST00000489198 DUOX2Q9NRD8 1548 aa18.84■□□□□ 0.61
MSRB1-204ENST00000489198 RNF17Q9BXT8 1623 aaKnown RBP18.83■□□□□ 0.61
MSRB1-204ENST00000489198 FBXO41Q8TF61 875 aa18.81■□□□□ 0.6
MSRB1-204ENST00000489198 KIF15Q9NS87 1388 aa18.81■□□□□ 0.6
MSRB1-204ENST00000489198 ERBINQ96RT1 1412 aa18.8■□□□□ 0.6
MSRB1-204ENST00000489198 PZPP20742 1482 aa18.78■□□□□ 0.6
MSRB1-204ENST00000489198 WASHC2CQ9Y4E1 1318 aa18.78■□□□□ 0.6
MSRB1-204ENST00000489198 ILDR2Q71H61 639 aa18.78■□□□□ 0.6
MSRB1-204ENST00000489198 ADGRL2O95490 1459 aa18.77■□□□□ 0.59
MSRB1-204ENST00000489198 MROH1Q8NDA8 1641 aa18.76■□□□□ 0.59
MSRB1-204ENST00000489198 ANKRD30AQ9BXX3 1397 aa18.76■□□□□ 0.59
MSRB1-204ENST00000489198 ZNF142P52746 1687 aaPredicted RBP18.76■□□□□ 0.59
MSRB1-204ENST00000489198 NCOA1Q15788 1441 aa18.75■□□□□ 0.59
MSRB1-204ENST00000489198 ABCC3O15438 1527 aa18.75■□□□□ 0.59
MSRB1-204ENST00000489198 DMRT2Q9Y5R5 561 aa18.75■□□□□ 0.59
MSRB1-204ENST00000489198 ZC3H13Q5T200 1668 aaKnown RBP18.75■□□□□ 0.59
MSRB1-204ENST00000489198 MYO3AQ8NEV4 1616 aa18.74■□□□□ 0.59
MSRB1-204ENST00000489198 STRCQ7RTU9 1775 aa18.73■□□□□ 0.59
MSRB1-204ENST00000489198 RRP7BPQ9NSQ0 103 aa18.73■□□□□ 0.59
MSRB1-204ENST00000489198 PRDM15P57071 1507 aaPredicted RBP18.73■□□□□ 0.59
MSRB1-204ENST00000489198 CEP170BQ9Y4F5 1589 aaPredicted RBP18.72■□□□□ 0.59
MSRB1-204ENST00000489198 PTPRTO14522 1441 aa18.72■□□□□ 0.59
MSRB1-204ENST00000489198 A2ML1A8K2U0 1454 aa18.71■□□□□ 0.59
MSRB1-204ENST00000489198 TNRQ92752 1358 aa18.71■□□□□ 0.59
MSRB1-204ENST00000489198 SOCS7O14512 581 aa18.71■□□□□ 0.59
MSRB1-204ENST00000489198 FAM50AQ14320 339 aaKnown RBP18.71■□□□□ 0.59
MSRB1-204ENST00000489198 PLA2R1Q13018 1463 aa18.71■□□□□ 0.59
MSRB1-204ENST00000489198 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.7■□□□□ 0.58
MSRB1-204ENST00000489198 DEPDC5O75140 1603 aa18.7■□□□□ 0.58
MSRB1-204ENST00000489198 FBXO31Q5XUX0 539 aaPredicted RBP18.69■□□□□ 0.58
MSRB1-204ENST00000489198 CAMSAP1Q5T5Y3 1602 aa18.69■□□□□ 0.58
MSRB1-204ENST00000489198 ARHGAP31Q2M1Z3 1444 aa18.68■□□□□ 0.58
MSRB1-204ENST00000489198 CHIC2Q9UKJ5 165 aa18.68■□□□□ 0.58
MSRB1-204ENST00000489198 NLRP1Q9C000 1473 aa18.68■□□□□ 0.58
MSRB1-204ENST00000489198 SPATA31D1Q6ZQQ2 1576 aa18.67■□□□□ 0.58
MSRB1-204ENST00000489198 VWDEQ8N2E2 1590 aa18.65■□□□□ 0.58
MSRB1-204ENST00000489198 PKD2Q13563 968 aa18.65■□□□□ 0.58
MSRB1-204ENST00000489198 ROCK1Q13464 1354 aa18.65■□□□□ 0.58
MSRB1-204ENST00000489198 ERVK-7P63135 1459 aa18.65■□□□□ 0.58
MSRB1-204ENST00000489198 LMTK2Q8IWU2 1503 aa18.64■□□□□ 0.58
MSRB1-204ENST00000489198 KANK1Q14678 1352 aa18.64■□□□□ 0.57
MSRB1-204ENST00000489198 ANKRD50Q9ULJ7 1429 aa18.63■□□□□ 0.57
MSRB1-204ENST00000489198 CEP152O94986 1710 aa18.62■□□□□ 0.57
MSRB1-204ENST00000489198 RRBP1Q9P2E9 1410 aaKnown RBP18.58■□□□□ 0.57
MSRB1-204ENST00000489198 NCKAP5LQ9HCH0 1330 aa18.58■□□□□ 0.57
MSRB1-204ENST00000489198 THEMISQ8N1K5 641 aaPredicted RBP18.58■□□□□ 0.56
MSRB1-204ENST00000489198 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.58■□□□□ 0.56
MSRB1-204ENST00000489198 UGGT1Q9NYU2 1555 aa18.58■□□□□ 0.56
MSRB1-204ENST00000489198 PPARGC1BQ86YN6 1023 aaKnown RBP18.57■□□□□ 0.56
MSRB1-204ENST00000489198 CERKQ8TCT0 537 aa18.57■□□□□ 0.56
MSRB1-204ENST00000489198 EFCAB6Q5THR3 1501 aa18.55■□□□□ 0.56
MSRB1-204ENST00000489198 LTBP4Q8N2S1 1624 aa18.53■□□□□ 0.56
MSRB1-204ENST00000489198 RPRD2Q5VT52 1461 aaKnown RBP18.52■□□□□ 0.56
MSRB1-204ENST00000489198 UNC13BO14795 1591 aa18.52■□□□□ 0.56
MSRB1-204ENST00000489198 MED14O60244 1454 aa18.52■□□□□ 0.55
MSRB1-204ENST00000489198 NEURL4Q96JN8 1562 aa18.51■□□□□ 0.55
MSRB1-204ENST00000489198 NOS1P29475 1434 aa18.51■□□□□ 0.55
MSRB1-204ENST00000489198 ANKLE2Q86XL3 938 aa18.51■□□□□ 0.55
MSRB1-204ENST00000489198 POLR1AO95602 1720 aaPredicted RBP18.5■□□□□ 0.55
MSRB1-204ENST00000489198 IQSEC2Q5JU85 1478 aa18.49■□□□□ 0.55
MSRB1-204ENST00000489198 UBR1Q8IWV7 1749 aa18.48■□□□□ 0.55
MSRB1-204ENST00000489198 TET3O43151 1660 aa18.47■□□□□ 0.55
MSRB1-204ENST00000489198 ARHGAP23Q9P227 1491 aa18.47■□□□□ 0.55
MSRB1-204ENST00000489198 SLIT1O75093 1534 aa18.47■□□□□ 0.55
MSRB1-204ENST00000489198 SYNMO15061 1565 aa18.47■□□□□ 0.55
MSRB1-204ENST00000489198 ITGAEP38570 1179 aa18.46■□□□□ 0.55
MSRB1-204ENST00000489198 KDM5AP29375 1690 aaKnown RBP18.46■□□□□ 0.55
MSRB1-204ENST00000489198 NPHP4O75161 1426 aaPredicted RBP18.46■□□□□ 0.55
MSRB1-204ENST00000489198 SLC52A1Q9NWF4 448 aa18.45■□□□□ 0.54
MSRB1-204ENST00000489198 ZNF335Q9H4Z2 1342 aaPredicted RBP18.45■□□□□ 0.54
MSRB1-204ENST00000489198 IQGAP3Q86VI3 1631 aa18.45■□□□□ 0.54
MSRB1-204ENST00000489198 CFAP65Q6ZU64 1925 aaKnown RBP18.44■□□□□ 0.54
MSRB1-204ENST00000489198 PIK3C2BO00750 1634 aa18.43■□□□□ 0.54
MSRB1-204ENST00000489198 IDI1Q13907 227 aa18.43■□□□□ 0.54
MSRB1-204ENST00000489198 GCC2Q8IWJ2 1684 aa18.43■□□□□ 0.54
MSRB1-204ENST00000489198 SCAF11Q99590 1463 aaKnown RBP18.42■□□□□ 0.54
MSRB1-204ENST00000489198 TMEM2Q9UHN6 1383 aa18.42■□□□□ 0.54
MSRB1-204ENST00000489198 NUP155O75694 1391 aa18.41■□□□□ 0.54
MSRB1-204ENST00000489198 DISP3Q9P2K9 1392 aa18.41■□□□□ 0.54
MSRB1-204ENST00000489198 NAIPQ13075 1403 aa18.4■□□□□ 0.54
MSRB1-204ENST00000489198 IQGAP1P46940 1657 aa18.4■□□□□ 0.54
MSRB1-204ENST00000489198 ADGRB3O60242 1522 aa18.39■□□□□ 0.54
MSRB1-204ENST00000489198 HFM1A2PYH4 1435 aa18.39■□□□□ 0.53
MSRB1-204ENST00000489198 CPS1P31327 1500 aa18.39■□□□□ 0.53
MSRB1-204ENST00000489198 LTKP29376 864 aa18.38■□□□□ 0.53
MSRB1-204ENST00000489198 EID1Q9Y6B2 187 aa18.37■□□□□ 0.53
MSRB1-204ENST00000489198 E9PCH4 1651 aa18.36■□□□□ 0.53
MSRB1-204ENST00000489198 TXNDC2Q86VQ3 553 aa18.36■□□□□ 0.53
MSRB1-204ENST00000489198 STAG3Q9UJ98 1225 aa18.36■□□□□ 0.53
MSRB1-204ENST00000489198 ZFYVE9O95405 1425 aa18.31■□□□□ 0.52
MSRB1-204ENST00000489198 TMEM131LA2VDJ0 1609 aa18.31■□□□□ 0.52
MSRB1-204ENST00000489198 HDGFP51858 240 aaKnown RBP18.26■□□□□ 0.51
MSRB1-204ENST00000489198 RIMS2Q9UQ26 1411 aa18.25■□□□□ 0.51
MSRB1-204ENST00000489198 PLEKHG1Q9ULL1 1385 aa18.25■□□□□ 0.51
MSRB1-204ENST00000489198 LRRC7Q96NW7 1537 aa18.24■□□□□ 0.51
MSRB1-204ENST00000489198 UBAP1LF5GYI3 381 aa18.24■□□□□ 0.51
MSRB1-204ENST00000489198 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms