RNA–Protein interactions for RNA: ENST00000489158.1

EXOSC1-211, Transcript of exosome component 1, humanhuman

TSL 2

Gene EXOSC1, Length 2,113 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-211ENST00000489158 ZMYM4Q5VZL5 1548 aa12.89□□□□□ -0.35
EXOSC1-211ENST00000489158 MYT1LQ9UL68 1186 aa12.88□□□□□ -0.35
EXOSC1-211ENST00000489158 MAGI2Q86UL8 1455 aa12.86□□□□□ -0.35
EXOSC1-211ENST00000489158 FRMPD1Q5SYB0 1578 aa12.86□□□□□ -0.35
EXOSC1-211ENST00000489158 DEPDC5O75140 1603 aa12.85□□□□□ -0.35
EXOSC1-211ENST00000489158 BCORL1Q5H9F3 1711 aa12.85□□□□□ -0.35
EXOSC1-211ENST00000489158 PZPP20742 1482 aa12.85□□□□□ -0.35
EXOSC1-211ENST00000489158 IQGAP3Q86VI3 1631 aa12.84□□□□□ -0.35
EXOSC1-211ENST00000489158 ABCA6Q8N139 1617 aa12.84□□□□□ -0.35
EXOSC1-211ENST00000489158 DHX29Q7Z478 1369 aaKnown RBP12.84□□□□□ -0.35
EXOSC1-211ENST00000489158 MPHOSPH9Q99550 1183 aa12.83□□□□□ -0.36
EXOSC1-211ENST00000489158 DIP2CQ9Y2E4 1556 aa12.82□□□□□ -0.36
EXOSC1-211ENST00000489158 A2MP01023 1474 aa12.82□□□□□ -0.36
EXOSC1-211ENST00000489158 TSHZ2Q9NRE2 1034 aa12.82□□□□□ -0.36
EXOSC1-211ENST00000489158 RNF17Q9BXT8 1623 aaKnown RBP12.81□□□□□ -0.36
EXOSC1-211ENST00000489158 NUP155O75694 1391 aa12.81□□□□□ -0.36
EXOSC1-211ENST00000489158 FAM135AQ9P2D6 1515 aa12.81□□□□□ -0.36
EXOSC1-211ENST00000489158 REREQ9P2R6 1566 aa12.8□□□□□ -0.36
EXOSC1-211ENST00000489158 SLC4A1APQ9BWU0 796 aaKnown RBP12.8□□□□□ -0.36
EXOSC1-211ENST00000489158 PRDM15P57071 1507 aaPredicted RBP12.8□□□□□ -0.36
EXOSC1-211ENST00000489158 TIMELESSQ9UNS1 1208 aa12.79□□□□□ -0.36
EXOSC1-211ENST00000489158 RAPGEF3O95398 923 aa12.79□□□□□ -0.36
EXOSC1-211ENST00000489158 SIN3AQ96ST3 1273 aa12.78□□□□□ -0.36
EXOSC1-211ENST00000489158 VWDEQ8N2E2 1590 aa12.78□□□□□ -0.36
EXOSC1-211ENST00000489158 KANK1Q14678 1352 aa12.76□□□□□ -0.37
EXOSC1-211ENST00000489158 MROH1Q8NDA8 1641 aa12.76□□□□□ -0.37
EXOSC1-211ENST00000489158 ARHGEF40Q8TER5 1519 aa12.76□□□□□ -0.37
EXOSC1-211ENST00000489158 TET3O43151 1660 aa12.76□□□□□ -0.37
EXOSC1-211ENST00000489158 FOXD1Q16676 465 aa12.76□□□□□ -0.37
EXOSC1-211ENST00000489158 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.76□□□□□ -0.37
EXOSC1-211ENST00000489158 ANKRD30BQ9BXX2 1392 aa12.75□□□□□ -0.37
EXOSC1-211ENST00000489158 ATP10AO60312 1499 aa12.75□□□□□ -0.37
EXOSC1-211ENST00000489158 LMTK2Q8IWU2 1503 aa12.74□□□□□ -0.37
EXOSC1-211ENST00000489158 YEATS2Q9ULM3 1422 aa12.74□□□□□ -0.37
EXOSC1-211ENST00000489158 AGLP35573 1532 aa12.74□□□□□ -0.37
EXOSC1-211ENST00000489158 ZC3H13Q5T200 1668 aaKnown RBP12.73□□□□□ -0.37
EXOSC1-211ENST00000489158 COL17A1Q9UMD9 1497 aaPredicted RBP12.73□□□□□ -0.37
EXOSC1-211ENST00000489158 ANP32EQ9BTT0 268 aa12.73□□□□□ -0.37
EXOSC1-211ENST00000489158 KIF3BO15066 747 aa12.73□□□□□ -0.37
EXOSC1-211ENST00000489158 PKD2Q13563 968 aa12.73□□□□□ -0.37
EXOSC1-211ENST00000489158 RPRD2Q5VT52 1461 aaKnown RBP12.72□□□□□ -0.37
EXOSC1-211ENST00000489158 E9PCH4 1651 aa12.71□□□□□ -0.38
EXOSC1-211ENST00000489158 TONSLQ96HA7 1378 aa12.7□□□□□ -0.38
EXOSC1-211ENST00000489158 EFCAB6Q5THR3 1501 aa12.7□□□□□ -0.38
EXOSC1-211ENST00000489158 CEP152O94986 1710 aa12.69□□□□□ -0.38
EXOSC1-211ENST00000489158 SPHKAPQ2M3C7 1700 aa12.68□□□□□ -0.38
EXOSC1-211ENST00000489158 BCANQ96GW7 911 aa12.67□□□□□ -0.38
EXOSC1-211ENST00000489158 ABCC3O15438 1527 aa12.67□□□□□ -0.38
EXOSC1-211ENST00000489158 CAMSAP1Q5T5Y3 1602 aa12.66□□□□□ -0.38
EXOSC1-211ENST00000489158 TRPM2O94759 1503 aa12.66□□□□□ -0.38
EXOSC1-211ENST00000489158 PPP6R1Q9UPN7 881 aa12.66□□□□□ -0.38
EXOSC1-211ENST00000489158 PTPRTO14522 1441 aa12.65□□□□□ -0.38
EXOSC1-211ENST00000489158 CCDC144AA2RUR9 1427 aa12.64□□□□□ -0.39
EXOSC1-211ENST00000489158 GGT6Q6P531 493 aa12.64□□□□□ -0.39
EXOSC1-211ENST00000489158 ARHGAP31Q2M1Z3 1444 aa12.63□□□□□ -0.39
EXOSC1-211ENST00000489158 FKBP8Q14318 412 aa12.63□□□□□ -0.39
EXOSC1-211ENST00000489158 PLA2R1Q13018 1463 aa12.63□□□□□ -0.39
EXOSC1-211ENST00000489158 NEURL4Q96JN8 1562 aa12.63□□□□□ -0.39
EXOSC1-211ENST00000489158 SIGLEC1Q9BZZ2 1709 aa12.62□□□□□ -0.39
EXOSC1-211ENST00000489158 PPP1R15AO75807 674 aaPredicted RBP12.61□□□□□ -0.39
EXOSC1-211ENST00000489158 WASHC2CQ9Y4E1 1318 aa12.61□□□□□ -0.39
EXOSC1-211ENST00000489158 NPATQ14207 1427 aa12.59□□□□□ -0.39
EXOSC1-211ENST00000489158 CNTLNQ9NXG0 1405 aa12.59□□□□□ -0.39
EXOSC1-211ENST00000489158 DDX10Q13206 875 aaKnown RBP12.59□□□□□ -0.39
EXOSC1-211ENST00000489158 CLTCL1P53675 1640 aa12.58□□□□□ -0.39
EXOSC1-211ENST00000489158 L3MBTL2Q969R5 705 aa12.58□□□□□ -0.4
EXOSC1-211ENST00000489158 KIF1BO60333 1816 aa12.58□□□□□ -0.4
EXOSC1-211ENST00000489158 CLTCQ00610 1675 aaKnown RBP12.57□□□□□ -0.4
EXOSC1-211ENST00000489158 MROH2AA6NES4 1674 aa12.56□□□□□ -0.4
EXOSC1-211ENST00000489158 NOS1P29475 1434 aa12.56□□□□□ -0.4
EXOSC1-211ENST00000489158 PREX1Q8TCU6 1659 aa12.56□□□□□ -0.4
EXOSC1-211ENST00000489158 PIK3C2BO00750 1634 aa12.55□□□□□ -0.4
EXOSC1-211ENST00000489158 SPATA31E1Q6ZUB1 1445 aa12.55□□□□□ -0.4
EXOSC1-211ENST00000489158 BCL11AQ9H165 835 aa12.55□□□□□ -0.4
EXOSC1-211ENST00000489158 UHRF1BP1Q6BDS2 1440 aa12.54□□□□□ -0.4
EXOSC1-211ENST00000489158 CFAP65Q6ZU64 1925 aaKnown RBP12.54□□□□□ -0.4
EXOSC1-211ENST00000489158 STAC3Q96MF2 364 aa12.53□□□□□ -0.4
EXOSC1-211ENST00000489158 NEFLP07196 543 aa12.53□□□□□ -0.4
EXOSC1-211ENST00000489158 RBM19Q9Y4C8 960 aaKnown RBP12.53□□□□□ -0.4
EXOSC1-211ENST00000489158 SYNMO15061 1565 aa12.53□□□□□ -0.4
EXOSC1-211ENST00000489158 MLECQ14165 292 aa12.52□□□□□ -0.4
EXOSC1-211ENST00000489158 SPATA31D1Q6ZQQ2 1576 aa12.52□□□□□ -0.41
EXOSC1-211ENST00000489158 ADGRB3O60242 1522 aa12.52□□□□□ -0.41
EXOSC1-211ENST00000489158 ARID4BQ4LE39 1312 aaPredicted RBP12.51□□□□□ -0.41
EXOSC1-211ENST00000489158 RGL3Q3MIN7 710 aa12.51□□□□□ -0.41
EXOSC1-211ENST00000489158 ZNF326Q5BKZ1 582 aaKnown RBP12.51□□□□□ -0.41
EXOSC1-211ENST00000489158 ESF1Q9H501 851 aaKnown RBP12.51□□□□□ -0.41
EXOSC1-211ENST00000489158 ERVK-7P63135 1459 aa12.51□□□□□ -0.41
EXOSC1-211ENST00000489158 IFT172Q9UG01 1749 aa12.5□□□□□ -0.41
EXOSC1-211ENST00000489158 FER1L4A9Z1Z3 1794 aa12.5□□□□□ -0.41
EXOSC1-211ENST00000489158 UGGT1Q9NYU2 1555 aa12.5□□□□□ -0.41
EXOSC1-211ENST00000489158 HIRIP3Q9BW71 556 aaPredicted RBP12.49□□□□□ -0.41
EXOSC1-211ENST00000489158 SLC52A1Q9NWF4 448 aa12.49□□□□□ -0.41
EXOSC1-211ENST00000489158 KDM2AQ9Y2K7 1162 aa12.49□□□□□ -0.41
EXOSC1-211ENST00000489158 DCAF11Q8TEB1 546 aa12.49□□□□□ -0.41
EXOSC1-211ENST00000489158 RALGAPBQ86X10 1494 aa12.48□□□□□ -0.41
EXOSC1-211ENST00000489158 CCER2I3L3R5 266 aa12.48□□□□□ -0.41
EXOSC1-211ENST00000489158 MYOM2P54296 1465 aa12.48□□□□□ -0.41
EXOSC1-211ENST00000489158 PRAG1Q86YV5 1406 aa12.47□□□□□ -0.41
EXOSC1-211ENST00000489158 TRPM1Q7Z4N2 1603 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms