RNA–Protein interactions for RNA: ENST00000489041.1

MTHFD2-208, Transcript of methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase, humanhuman

TSL 2

Gene MTHFD2, Length 1,135 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD2-208ENST00000489041 SYCP2Q9BX26 1530 aa13.18□□□□□ -0.3
MTHFD2-208ENST00000489041 NCKAP5LQ9HCH0 1330 aa13.18□□□□□ -0.3
MTHFD2-208ENST00000489041 POLA2Q14181 598 aa13.18□□□□□ -0.3
MTHFD2-208ENST00000489041 PKD2Q13563 968 aa13.17□□□□□ -0.3
MTHFD2-208ENST00000489041 A2MP01023 1474 aa13.16□□□□□ -0.3
MTHFD2-208ENST00000489041 ZNF644Q9H582 1327 aaPredicted RBP13.16□□□□□ -0.3
MTHFD2-208ENST00000489041 ATP7AQ04656 1500 aa13.15□□□□□ -0.3
MTHFD2-208ENST00000489041 LTBP4Q8N2S1 1624 aa13.15□□□□□ -0.3
MTHFD2-208ENST00000489041 ILDR2Q71H61 639 aa13.15□□□□□ -0.3
MTHFD2-208ENST00000489041 CAMSAP1Q5T5Y3 1602 aa13.14□□□□□ -0.31
MTHFD2-208ENST00000489041 IQSEC2Q5JU85 1478 aa13.14□□□□□ -0.31
MTHFD2-208ENST00000489041 MROH2AA6NES4 1674 aa13.14□□□□□ -0.31
MTHFD2-208ENST00000489041 PTPRKQ15262 1439 aa13.13□□□□□ -0.31
MTHFD2-208ENST00000489041 SUPT6HQ7KZ85 1726 aaKnown RBP13.13□□□□□ -0.31
MTHFD2-208ENST00000489041 ZNF335Q9H4Z2 1342 aaPredicted RBP13.13□□□□□ -0.31
MTHFD2-208ENST00000489041 SOCS7O14512 581 aa13.12□□□□□ -0.31
MTHFD2-208ENST00000489041 RSPH4AQ5TD94 716 aa13.12□□□□□ -0.31
MTHFD2-208ENST00000489041 DHX29Q7Z478 1369 aaKnown RBP13.11□□□□□ -0.31
MTHFD2-208ENST00000489041 UBAP1LF5GYI3 381 aa13.11□□□□□ -0.31
MTHFD2-208ENST00000489041 RTEL1-TNFRSF6BF6WH68 1400 aa13.11□□□□□ -0.31
MTHFD2-208ENST00000489041 PLXNC1O60486 1568 aa13.11□□□□□ -0.31
MTHFD2-208ENST00000489041 INO80Q9ULG1 1556 aaPredicted RBP13.11□□□□□ -0.31
MTHFD2-208ENST00000489041 MBD5Q9P267 1494 aa13.1□□□□□ -0.31
MTHFD2-208ENST00000489041 KIF3BO15066 747 aa13.1□□□□□ -0.31
MTHFD2-208ENST00000489041 PLA2R1Q13018 1463 aa13.1□□□□□ -0.31
MTHFD2-208ENST00000489041 CLTCQ00610 1675 aaKnown RBP13.08□□□□□ -0.31
MTHFD2-208ENST00000489041 CEP162Q5TB80 1403 aa13.08□□□□□ -0.32
MTHFD2-208ENST00000489041 FBXO31Q5XUX0 539 aaPredicted RBP13.08□□□□□ -0.32
MTHFD2-208ENST00000489041 WASHC2CQ9Y4E1 1318 aa13.08□□□□□ -0.32
MTHFD2-208ENST00000489041 TCOF1Q13428 1488 aaKnown RBP13.07□□□□□ -0.32
MTHFD2-208ENST00000489041 TSPY4P0CV99 314 aa13.06□□□□□ -0.32
MTHFD2-208ENST00000489041 TSPY10P0CW01 314 aa13.06□□□□□ -0.32
MTHFD2-208ENST00000489041 ADGBQ8N7X0 1667 aa13.05□□□□□ -0.32
MTHFD2-208ENST00000489041 A2ML1A8K2U0 1454 aa13.05□□□□□ -0.32
MTHFD2-208ENST00000489041 TIAM1Q13009 1591 aa13.05□□□□□ -0.32
MTHFD2-208ENST00000489041 CEP170BQ9Y4F5 1589 aaPredicted RBP13.05□□□□□ -0.32
MTHFD2-208ENST00000489041 EHBP1L1Q8N3D4 1523 aa13.04□□□□□ -0.32
MTHFD2-208ENST00000489041 MYO3AQ8NEV4 1616 aa13.04□□□□□ -0.32
MTHFD2-208ENST00000489041 ANKLE2Q86XL3 938 aa13.04□□□□□ -0.32
MTHFD2-208ENST00000489041 THEMISQ8N1K5 641 aaPredicted RBP13.04□□□□□ -0.32
MTHFD2-208ENST00000489041 TNRQ92752 1358 aa13.04□□□□□ -0.32
MTHFD2-208ENST00000489041 ZNF142P52746 1687 aaPredicted RBP13.03□□□□□ -0.32
MTHFD2-208ENST00000489041 ATXN8OSP0DMR3 200 aa13.03□□□□□ -0.32
MTHFD2-208ENST00000489041 TOM1O60784 492 aa13.02□□□□□ -0.33
MTHFD2-208ENST00000489041 CCDC141Q6ZP82 1450 aa13.02□□□□□ -0.33
MTHFD2-208ENST00000489041 MIA2Q96PC5 1412 aa13.01□□□□□ -0.33
MTHFD2-208ENST00000489041 NCOA2Q15596 1464 aa13.01□□□□□ -0.33
MTHFD2-208ENST00000489041 DNMT1P26358 1616 aaKnown RBP13.01□□□□□ -0.33
MTHFD2-208ENST00000489041 SPATA31D1Q6ZQQ2 1576 aa13□□□□□ -0.33
MTHFD2-208ENST00000489041 PZPP20742 1482 aa12.99□□□□□ -0.33
MTHFD2-208ENST00000489041 CAMSAP2Q08AD1 1489 aa12.99□□□□□ -0.33
MTHFD2-208ENST00000489041 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.99□□□□□ -0.331e-6■■■■□ 19.5
MTHFD2-208ENST00000489041 PIP4K2BP78356 416 aa12.98□□□□□ -0.33
MTHFD2-208ENST00000489041 KDM5DQ9BY66 1539 aa12.98□□□□□ -0.33
MTHFD2-208ENST00000489041 FAM135AQ9P2D6 1515 aa12.98□□□□□ -0.33
MTHFD2-208ENST00000489041 NLRP1Q9C000 1473 aa12.97□□□□□ -0.33
MTHFD2-208ENST00000489041 SHANK2Q9UPX8 1470 aa12.97□□□□□ -0.33
MTHFD2-208ENST00000489041 HSPA1LP34931 641 aa12.96□□□□□ -0.33
MTHFD2-208ENST00000489041 CPS1P31327 1500 aa12.95□□□□□ -0.34
MTHFD2-208ENST00000489041 ARHGEF5Q12774 1597 aa12.94□□□□□ -0.34
MTHFD2-208ENST00000489041 LOC105371045A0A1W2PR82 267 aa12.93□□□□□ -0.34
MTHFD2-208ENST00000489041 KANK4Q5T7N3 995 aaPredicted RBP12.93□□□□□ -0.34
MTHFD2-208ENST00000489041 NPHP4O75161 1426 aaPredicted RBP12.93□□□□□ -0.34
MTHFD2-208ENST00000489041 UGGT1Q9NYU2 1555 aa12.93□□□□□ -0.34
MTHFD2-208ENST00000489041 MED14O60244 1454 aa12.92□□□□□ -0.34
MTHFD2-208ENST00000489041 LRRC9Q6ZRR7 1453 aa12.92□□□□□ -0.34
MTHFD2-208ENST00000489041 NEURL4Q96JN8 1562 aa12.92□□□□□ -0.34
MTHFD2-208ENST00000489041 VPS8Q8N3P4 1428 aa12.9□□□□□ -0.34
MTHFD2-208ENST00000489041 POLR1AO95602 1720 aaPredicted RBP12.89□□□□□ -0.35
MTHFD2-208ENST00000489041 MYOM3Q5VTT5 1437 aa12.88□□□□□ -0.35
MTHFD2-208ENST00000489041 DEPDC5O75140 1603 aa12.88□□□□□ -0.35
MTHFD2-208ENST00000489041 VWDEQ8N2E2 1590 aa12.88□□□□□ -0.35
MTHFD2-208ENST00000489041 ABCC3O15438 1527 aa12.88□□□□□ -0.35
MTHFD2-208ENST00000489041 MAST1Q9Y2H9 1570 aa12.86□□□□□ -0.35
MTHFD2-208ENST00000489041 TXNDC2Q86VQ3 553 aa12.86□□□□□ -0.35
MTHFD2-208ENST00000489041 RRP7BPQ9NSQ0 103 aa12.86□□□□□ -0.35
MTHFD2-208ENST00000489041 EID1Q9Y6B2 187 aa12.86□□□□□ -0.35
MTHFD2-208ENST00000489041 MAP3K1Q13233 1512 aa12.86□□□□□ -0.35
MTHFD2-208ENST00000489041 ERVK-7P63135 1459 aa12.85□□□□□ -0.35
MTHFD2-208ENST00000489041 RNF17Q9BXT8 1623 aaKnown RBP12.85□□□□□ -0.35
MTHFD2-208ENST00000489041 LTKP29376 864 aa12.85□□□□□ -0.35
MTHFD2-208ENST00000489041 LRRC7Q96NW7 1537 aa12.83□□□□□ -0.35
MTHFD2-208ENST00000489041 DUOX2Q9NRD8 1548 aa12.83□□□□□ -0.35
MTHFD2-208ENST00000489041 KIF15Q9NS87 1388 aa12.83□□□□□ -0.36
MTHFD2-208ENST00000489041 EIF2AK4Q9P2K8 1649 aaKnown RBP12.83□□□□□ -0.36
MTHFD2-208ENST00000489041 IQGAP1P46940 1657 aa12.83□□□□□ -0.36
MTHFD2-208ENST00000489041 ZC3H13Q5T200 1668 aaKnown RBP12.83□□□□□ -0.36
MTHFD2-208ENST00000489041 ARHGAP31Q2M1Z3 1444 aa12.82□□□□□ -0.36
MTHFD2-208ENST00000489041 STAG3Q9UJ98 1225 aa12.82□□□□□ -0.36
MTHFD2-208ENST00000489041 MED1Q15648 1581 aaPredicted RBP12.81□□□□□ -0.36
MTHFD2-208ENST00000489041 SCAF11Q99590 1463 aaKnown RBP12.81□□□□□ -0.36
MTHFD2-208ENST00000489041 KANK1Q14678 1352 aa12.81□□□□□ -0.36
MTHFD2-208ENST00000489041 ABCC5O15440 1437 aa12.8□□□□□ -0.36
MTHFD2-208ENST00000489041 MROH1Q8NDA8 1641 aa12.8□□□□□ -0.36
MTHFD2-208ENST00000489041 ALKQ9UM73 1620 aa12.8□□□□□ -0.36
MTHFD2-208ENST00000489041 ERBINQ96RT1 1412 aa12.79□□□□□ -0.36
MTHFD2-208ENST00000489041 IDI1Q13907 227 aa12.79□□□□□ -0.36
MTHFD2-208ENST00000489041 CHIC2Q9UKJ5 165 aa12.79□□□□□ -0.36
MTHFD2-208ENST00000489041 ARHGAP23Q9P227 1491 aa12.78□□□□□ -0.36
MTHFD2-208ENST00000489041 TMEM2Q9UHN6 1383 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms