RNA–Protein interactions for RNA: ENST00000489030.1

USP11-210, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 2

Gene USP11, Length 340 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-210ENST00000489030 RTEL1-TNFRSF6BF6WH68 1400 aa18.44■□□□□ 0.54
USP11-210ENST00000489030 CEP162Q5TB80 1403 aa18.44■□□□□ 0.54
USP11-210ENST00000489030 TNRQ92752 1358 aa18.43■□□□□ 0.54
USP11-210ENST00000489030 HSPA1LP34931 641 aa18.42■□□□□ 0.54
USP11-210ENST00000489030 PIP4K2BP78356 416 aa18.4■□□□□ 0.54
USP11-210ENST00000489030 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.4■□□□□ 0.54
USP11-210ENST00000489030 PZPP20742 1482 aa18.39■□□□□ 0.54
USP11-210ENST00000489030 CAMSAP2Q08AD1 1489 aa18.39■□□□□ 0.54
USP11-210ENST00000489030 NCOA2Q15596 1464 aa18.39■□□□□ 0.54
USP11-210ENST00000489030 CCDC141Q6ZP82 1450 aa18.39■□□□□ 0.53
USP11-210ENST00000489030 SCAF1Q9H7N4 1312 aaKnown RBP18.38■□□□□ 0.53
USP11-210ENST00000489030 KDM5DQ9BY66 1539 aa18.38■□□□□ 0.53
USP11-210ENST00000489030 SHANK2Q9UPX8 1470 aa18.37■□□□□ 0.53
USP11-210ENST00000489030 ALKQ9UM73 1620 aa18.36■□□□□ 0.53
USP11-210ENST00000489030 WASHC2CQ9Y4E1 1318 aa18.36■□□□□ 0.53
USP11-210ENST00000489030 POLR1AO95602 1720 aaPredicted RBP18.35■□□□□ 0.53
USP11-210ENST00000489030 VWDEQ8N2E2 1590 aa18.35■□□□□ 0.53
USP11-210ENST00000489030 MIA2Q96PC5 1412 aa18.35■□□□□ 0.53
USP11-210ENST00000489030 ANKLE2Q86XL3 938 aa18.32■□□□□ 0.52
USP11-210ENST00000489030 MED1Q15648 1581 aaPredicted RBP18.32■□□□□ 0.52
USP11-210ENST00000489030 CPS1P31327 1500 aa18.32■□□□□ 0.52
USP11-210ENST00000489030 NPHP4O75161 1426 aaPredicted RBP18.32■□□□□ 0.52
USP11-210ENST00000489030 UGGT1Q9NYU2 1555 aa18.3■□□□□ 0.52
USP11-210ENST00000489030 NLRP1Q9C000 1473 aa18.29■□□□□ 0.52
USP11-210ENST00000489030 TOM1O60784 492 aa18.29■□□□□ 0.52
USP11-210ENST00000489030 SENP3Q9H4L4 574 aaPredicted RBP18.29■□□□□ 0.52
USP11-210ENST00000489030 MED14O60244 1454 aa18.28■□□□□ 0.52
USP11-210ENST00000489030 THEMISQ8N1K5 641 aaPredicted RBP18.28■□□□□ 0.52
USP11-210ENST00000489030 ARHGEF5Q12774 1597 aa18.28■□□□□ 0.52
USP11-210ENST00000489030 ABCC3O15438 1527 aa18.28■□□□□ 0.52
USP11-210ENST00000489030 FAM135AQ9P2D6 1515 aa18.28■□□□□ 0.52
USP11-210ENST00000489030 STRCP1A6NGW2 1772 aa18.27■□□□□ 0.52
USP11-210ENST00000489030 RSPH4AQ5TD94 716 aa18.27■□□□□ 0.52
USP11-210ENST00000489030 MROH1Q8NDA8 1641 aa18.25■□□□□ 0.51
USP11-210ENST00000489030 KANK4Q5T7N3 995 aaPredicted RBP18.25■□□□□ 0.51
USP11-210ENST00000489030 DEPDC5O75140 1603 aa18.24■□□□□ 0.51
USP11-210ENST00000489030 RNF17Q9BXT8 1623 aaKnown RBP18.24■□□□□ 0.51
USP11-210ENST00000489030 TSPY4P0CV99 314 aa18.24■□□□□ 0.51
USP11-210ENST00000489030 TSPY10P0CW01 314 aa18.24■□□□□ 0.51
USP11-210ENST00000489030 ERVK-7P63135 1459 aa18.24■□□□□ 0.51
USP11-210ENST00000489030 LRRC7Q96NW7 1537 aa18.23■□□□□ 0.51
USP11-210ENST00000489030 IQGAP1P46940 1657 aa18.22■□□□□ 0.51
USP11-210ENST00000489030 LRRC9Q6ZRR7 1453 aa18.22■□□□□ 0.51
USP11-210ENST00000489030 LOC105371045A0A1W2PR82 267 aa18.2■□□□□ 0.5
USP11-210ENST00000489030 MAST1Q9Y2H9 1570 aa18.2■□□□□ 0.5
USP11-210ENST00000489030 LTKP29376 864 aa18.19■□□□□ 0.5
USP11-210ENST00000489030 CEP152O94986 1710 aa18.18■□□□□ 0.5
USP11-210ENST00000489030 CFAP65Q6ZU64 1925 aaKnown RBP18.17■□□□□ 0.5
USP11-210ENST00000489030 VPS8Q8N3P4 1428 aa18.17■□□□□ 0.5
USP11-210ENST00000489030 ZC3H13Q5T200 1668 aaKnown RBP18.16■□□□□ 0.5
USP11-210ENST00000489030 UBR1Q8IWV7 1749 aa18.15■□□□□ 0.5
USP11-210ENST00000489030 EIF2AK4Q9P2K8 1649 aaKnown RBP18.14■□□□□ 0.49
USP11-210ENST00000489030 SCAF11Q99590 1463 aaKnown RBP18.14■□□□□ 0.49
USP11-210ENST00000489030 PHF23Q9BUL5 403 aaPredicted RBP18.13■□□□□ 0.49
USP11-210ENST00000489030 MYOM3Q5VTT5 1437 aa18.13■□□□□ 0.49
USP11-210ENST00000489030 ARHGAP23Q9P227 1491 aa18.13■□□□□ 0.49
USP11-210ENST00000489030 RGS17Q9UGC6 210 aaPredicted RBP18.12■□□□□ 0.49
USP11-210ENST00000489030 TXNDC2Q86VQ3 553 aa18.11■□□□□ 0.49
USP11-210ENST00000489030 RRP7BPQ9NSQ0 103 aa18.11■□□□□ 0.49
USP11-210ENST00000489030 SYNMO15061 1565 aa18.1■□□□□ 0.49
USP11-210ENST00000489030 DUOX2Q9NRD8 1548 aa18.1■□□□□ 0.49
USP11-210ENST00000489030 ABCC5O15440 1437 aa18.1■□□□□ 0.49
USP11-210ENST00000489030 KIF15Q9NS87 1388 aa18.1■□□□□ 0.49
USP11-210ENST00000489030 SLIT1O75093 1534 aa18.09■□□□□ 0.49
USP11-210ENST00000489030 XIRP1Q702N8 1843 aaKnown RBP18.09■□□□□ 0.49
USP11-210ENST00000489030 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.08■□□□□ 0.48
USP11-210ENST00000489030 PRDM15P57071 1507 aaPredicted RBP18.08■□□□□ 0.48
USP11-210ENST00000489030 ARHGAP31Q2M1Z3 1444 aa18.07■□□□□ 0.48
USP11-210ENST00000489030 RBM33Q96EV2 1170 aaKnown RBP18.06■□□□□ 0.48
USP11-210ENST00000489030 PIK3C2BO00750 1634 aa18.05■□□□□ 0.48
USP11-210ENST00000489030 TMEM2Q9UHN6 1383 aa18.04■□□□□ 0.48
USP11-210ENST00000489030 MAP3K1Q13233 1512 aa18.04■□□□□ 0.48
USP11-210ENST00000489030 ERBINQ96RT1 1412 aa18.03■□□□□ 0.48
USP11-210ENST00000489030 IDI1Q13907 227 aa18.02■□□□□ 0.48
USP11-210ENST00000489030 CROCC2H7BZ55 1655 aa18.02■□□□□ 0.47
USP11-210ENST00000489030 TMEM94Q12767 1356 aa18.02■□□□□ 0.47
USP11-210ENST00000489030 DAPK1P53355 1430 aa18.01■□□□□ 0.47
USP11-210ENST00000489030 CHIC2Q9UKJ5 165 aa18.01■□□□□ 0.47
USP11-210ENST00000489030 SLC26A8Q96RN1 970 aa18■□□□□ 0.47
USP11-210ENST00000489030 EID1Q9Y6B2 187 aa18■□□□□ 0.47
USP11-210ENST00000489030 PTPN23Q9H3S7 1636 aa18■□□□□ 0.47
USP11-210ENST00000489030 POTEAQ6S8J7 498 aa17.98■□□□□ 0.47
USP11-210ENST00000489030 FAM135BQ49AJ0 1406 aa17.98■□□□□ 0.47
USP11-210ENST00000489030 TET3O43151 1660 aa17.97■□□□□ 0.47
USP11-210ENST00000489030 STAG3Q9UJ98 1225 aa17.97■□□□□ 0.47
USP11-210ENST00000489030 EFCAB6Q5THR3 1501 aa17.97■□□□□ 0.47
USP11-210ENST00000489030 KCNA6P17658 529 aa17.96■□□□□ 0.47
USP11-210ENST00000489030 FGD6Q6ZV73 1430 aa17.96■□□□□ 0.47
USP11-210ENST00000489030 LMTK2Q8IWU2 1503 aa17.95■□□□□ 0.46
USP11-210ENST00000489030 NOS1P29475 1434 aa17.95■□□□□ 0.46
USP11-210ENST00000489030 PROSER2Q86WR7 435 aaPredicted RBP17.94■□□□□ 0.46
USP11-210ENST00000489030 KANK1Q14678 1352 aa17.93■□□□□ 0.46
USP11-210ENST00000489030 ROBO1Q9Y6N7 1651 aa17.92■□□□□ 0.46
USP11-210ENST00000489030 ANKRD30AQ9BXX3 1397 aa17.91■□□□□ 0.46
USP11-210ENST00000489030 ADGRB3O60242 1522 aa17.9■□□□□ 0.46
USP11-210ENST00000489030 NWD1Q149M9 1564 aa17.88■□□□□ 0.45
USP11-210ENST00000489030 KDM5AP29375 1690 aaKnown RBP17.88■□□□□ 0.45
USP11-210ENST00000489030 ZFYVE9O95405 1425 aa17.87■□□□□ 0.45
USP11-210ENST00000489030 NKTRP30414 1462 aaKnown RBP17.85■□□□□ 0.45
USP11-210ENST00000489030 BCANQ96GW7 911 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 8028.8 ms