RNA–Protein interactions for RNA: ENST00000488961.5

BEST3-205, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 2,878 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-205ENST00000488961 KIAA1107Q9UPP5 1409 aa10.33□□□□□ -0.76
BEST3-205ENST00000488961 ROCK1Q13464 1354 aa10.33□□□□□ -0.76
BEST3-205ENST00000488961 NUTM2DQ5VT03 806 aaPredicted RBP10.32□□□□□ -0.76
BEST3-205ENST00000488961 TMC1Q8TDI8 760 aa10.32□□□□□ -0.76
BEST3-205ENST00000488961 ARHGAP5Q13017 1502 aa10.32□□□□□ -0.76
BEST3-205ENST00000488961 CFAP65Q6ZU64 1925 aaKnown RBP10.31□□□□□ -0.76
BEST3-205ENST00000488961 SYCP2Q9BX26 1530 aa10.31□□□□□ -0.76
BEST3-205ENST00000488961 ROCK2O75116 1388 aaKnown RBP10.31□□□□□ -0.76
BEST3-205ENST00000488961 CHGAP10645 457 aaKnown RBP10.3□□□□□ -0.76
BEST3-205ENST00000488961 NOP58Q9Y2X3 529 aaKnown RBP10.3□□□□□ -0.76
BEST3-205ENST00000488961 PLEKHH2Q8IVE3 1493 aa10.3□□□□□ -0.76
BEST3-205ENST00000488961 NCBP3Q53F19 620 aaKnown RBP10.29□□□□□ -0.76
BEST3-205ENST00000488961 TTC37Q6PGP7 1564 aa10.29□□□□□ -0.76
BEST3-205ENST00000488961 ABCC10Q5T3U5 1492 aa10.29□□□□□ -0.76
BEST3-205ENST00000488961 SKAP1Q86WV1 359 aa10.29□□□□□ -0.76
BEST3-205ENST00000488961 ABCA8O94911 1581 aa10.29□□□□□ -0.76
BEST3-205ENST00000488961 RTL5Q5HYW3 569 aaPredicted RBP10.28□□□□□ -0.76
BEST3-205ENST00000488961 ITSN2Q9NZM3 1697 aa10.28□□□□□ -0.76
BEST3-205ENST00000488961 SPATA31E1Q6ZUB1 1445 aa10.28□□□□□ -0.76
BEST3-205ENST00000488961 CDC42BPBQ9Y5S2 1711 aa10.28□□□□□ -0.76
BEST3-205ENST00000488961 SAMD9LQ8IVG5 1584 aa10.27□□□□□ -0.77
BEST3-205ENST00000488961 ADGBQ8N7X0 1667 aa10.26□□□□□ -0.77
BEST3-205ENST00000488961 DHX29Q7Z478 1369 aaKnown RBP10.26□□□□□ -0.77
BEST3-205ENST00000488961 CDCA7LQ96GN5 454 aa10.25□□□□□ -0.77
BEST3-205ENST00000488961 MBD5Q9P267 1494 aa10.25□□□□□ -0.77
BEST3-205ENST00000488961 POTEDQ86YR6 584 aa10.25□□□□□ -0.77
BEST3-205ENST00000488961 ZMYND15Q9H091 742 aa10.25□□□□□ -0.77
BEST3-205ENST00000488961 CROCC2H7BZ55 1655 aa10.25□□□□□ -0.77
BEST3-205ENST00000488961 KIF3BO15066 747 aa10.24□□□□□ -0.77
BEST3-205ENST00000488961 PLIN1O60240 522 aa10.24□□□□□ -0.77
BEST3-205ENST00000488961 CCDC144AA2RUR9 1427 aa10.24□□□□□ -0.77
BEST3-205ENST00000488961 ARHGEF12Q9NZN5 1544 aa10.24□□□□□ -0.77
BEST3-205ENST00000488961 TNNT2P45379 298 aaPredicted RBP10.24□□□□□ -0.77
BEST3-205ENST00000488961 TRAPPC8Q9Y2L5 1435 aa10.24□□□□□ -0.77
BEST3-205ENST00000488961 PANK3Q9H999 370 aa10.24□□□□□ -0.77
BEST3-205ENST00000488961 VSIG10Q8N0Z9 540 aa10.23□□□□□ -0.77
BEST3-205ENST00000488961 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.23□□□□□ -0.77
BEST3-205ENST00000488961 DISP3Q9P2K9 1392 aa10.22□□□□□ -0.77
BEST3-205ENST00000488961 FAM135AQ9P2D6 1515 aa10.22□□□□□ -0.77
BEST3-205ENST00000488961 SAFB2Q14151 953 aaKnown RBP eCLIP10.22□□□□□ -0.77
BEST3-205ENST00000488961 CCDC141Q6ZP82 1450 aa10.22□□□□□ -0.77
BEST3-205ENST00000488961 GGT6Q6P531 493 aa10.21□□□□□ -0.77
BEST3-205ENST00000488961 DNAJC5Q9H3Z4 198 aa10.21□□□□□ -0.77
BEST3-205ENST00000488961 BRPF3Q9ULD4 1205 aa10.21□□□□□ -0.78
BEST3-205ENST00000488961 SPAG9O60271 1321 aaKnown RBP10.21□□□□□ -0.78
BEST3-205ENST00000488961 KLHL34Q8N239 644 aa10.2□□□□□ -0.78
BEST3-205ENST00000488961 PNISRQ8TF01 805 aaKnown RBP10.2□□□□□ -0.78
BEST3-205ENST00000488961 PLA2R1Q13018 1463 aa10.2□□□□□ -0.78
BEST3-205ENST00000488961 ADGRL2O95490 1459 aa10.2□□□□□ -0.78
BEST3-205ENST00000488961 KDM5CP41229 1560 aa10.2□□□□□ -0.78
BEST3-205ENST00000488961 EFCAB2Q5VUJ9 269 aa10.2□□□□□ -0.78
BEST3-205ENST00000488961 ADCY10Q96PN6 1610 aa10.2□□□□□ -0.78
BEST3-205ENST00000488961 CCDC146Q8IYE0 955 aa10.19□□□□□ -0.78
BEST3-205ENST00000488961 ZBED9Q6R2W3 1325 aa10.19□□□□□ -0.78
BEST3-205ENST00000488961 KCNA4P22459 653 aa10.18□□□□□ -0.78
BEST3-205ENST00000488961 SCAPERQ9BY12 1400 aa10.18□□□□□ -0.78
BEST3-205ENST00000488961 A0A0U1RQG5 324 aaPredicted RBP10.17□□□□□ -0.78
BEST3-205ENST00000488961 CFAP70Q5T0N1 1121 aa10.17□□□□□ -0.78
BEST3-205ENST00000488961 NPM2Q86SE8 214 aaKnown RBP10.17□□□□□ -0.78
BEST3-205ENST00000488961 TMEM132EQ6IEE7 984 aa10.17□□□□□ -0.78
BEST3-205ENST00000488961 UGGT1Q9NYU2 1555 aa10.16□□□□□ -0.78
BEST3-205ENST00000488961 A2MP01023 1474 aa10.16□□□□□ -0.78
BEST3-205ENST00000488961 EXOC6Q8TAG9 804 aa10.16□□□□□ -0.78
BEST3-205ENST00000488961 PPP4R2Q9NY27 417 aa10.16□□□□□ -0.78
BEST3-205ENST00000488961 PREX2Q70Z35 1606 aa10.15□□□□□ -0.78
BEST3-205ENST00000488961 RAPGEF3O95398 923 aa10.15□□□□□ -0.78
BEST3-205ENST00000488961 TESK2Q96S53 571 aa10.15□□□□□ -0.78
BEST3-205ENST00000488961 NEUROD2Q15784 382 aa10.15□□□□□ -0.79
BEST3-205ENST00000488961 ABCC2Q92887 1545 aa10.14□□□□□ -0.79
BEST3-205ENST00000488961 TULP1O00294 542 aaPredicted RBP10.14□□□□□ -0.79
BEST3-205ENST00000488961 NUDCQ9Y266 331 aa10.14□□□□□ -0.79
BEST3-205ENST00000488961 PRAG1Q86YV5 1406 aa10.14□□□□□ -0.79
BEST3-205ENST00000488961 RALGAPBQ86X10 1494 aa10.14□□□□□ -0.79
BEST3-205ENST00000488961 GLIPR1L2Q4G1C9 344 aa10.14□□□□□ -0.79
BEST3-205ENST00000488961 TRAK1Q9UPV9 953 aa10.14□□□□□ -0.79
BEST3-205ENST00000488961 ZCCHC11Q5TAX3 1644 aaKnown RBP10.14□□□□□ -0.79
BEST3-205ENST00000488961 MYO5CQ9NQX4 1742 aa10.13□□□□□ -0.79
BEST3-205ENST00000488961 MYBBP1AQ9BQG0 1328 aaKnown RBP10.13□□□□□ -0.79
BEST3-205ENST00000488961 ADGRF5Q8IZF2 1346 aa10.12□□□□□ -0.79
BEST3-205ENST00000488961 KDM5DQ9BY66 1539 aa10.12□□□□□ -0.79
BEST3-205ENST00000488961 ADAMTS8Q9UP79 889 aa10.12□□□□□ -0.79
BEST3-205ENST00000488961 PER1O15534 1290 aaPredicted RBP10.12□□□□□ -0.79
BEST3-205ENST00000488961 KTN1Q86UP2 1357 aaKnown RBP10.11□□□□□ -0.79
BEST3-205ENST00000488961 C20orf194Q5TEA3 1177 aa10.11□□□□□ -0.79
BEST3-205ENST00000488961 STK26Q9P289 416 aa10.11□□□□□ -0.79
BEST3-205ENST00000488961 TMF1P82094 1093 aa10.1□□□□□ -0.79
BEST3-205ENST00000488961 OSCARQ8IYS5 282 aa10.1□□□□□ -0.79
BEST3-205ENST00000488961 SHANK2Q9UPX8 1470 aa10.1□□□□□ -0.79
BEST3-205ENST00000488961 RRP7AQ9Y3A4 280 aaKnown RBP10.1□□□□□ -0.79
BEST3-205ENST00000488961 RSPH6AQ9H0K4 717 aa10.09□□□□□ -0.79
BEST3-205ENST00000488961 ZBTB47Q9UFB7 747 aaPredicted RBP10.09□□□□□ -0.79
BEST3-205ENST00000488961 KNSTRNQ9Y448 316 aa10.09□□□□□ -0.79
BEST3-205ENST00000488961 PLCH2O75038 1416 aa10.09□□□□□ -0.79
BEST3-205ENST00000488961 POLR1AO95602 1720 aaPredicted RBP10.09□□□□□ -0.79
BEST3-205ENST00000488961 MLECQ14165 292 aa10.09□□□□□ -0.79
BEST3-205ENST00000488961 LAS1LQ9Y4W2 734 aaKnown RBP10.09□□□□□ -0.79
BEST3-205ENST00000488961 ERBINQ96RT1 1412 aa10.09□□□□□ -0.79
BEST3-205ENST00000488961 CYB5RLQ6IPT4 315 aa10.08□□□□□ -0.8
BEST3-205ENST00000488961 ARHGEF5Q12774 1597 aa10.08□□□□□ -0.8
BEST3-205ENST00000488961 NLRP13Q86W25 1043 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms