RNA–Protein interactions for RNA: ENST00000488861.6

SAMMSON-202, survival associated mitochondrial melanoma specific oncogenic non-coding RNA, humanhuman

TSL 3

Gene SAMMSON, Length 1,433 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMMSON-202ENST00000488861 SHROOM2Q13796 1616 aa9.49□□□□□ -0.89
SAMMSON-202ENST00000488861 NUP153P49790 1475 aaKnown RBP9.49□□□□□ -0.89
SAMMSON-202ENST00000488861 ZEB1P37275 1124 aaPredicted RBP9.48□□□□□ -0.89
SAMMSON-202ENST00000488861 EFCAB3Q8N7B9 438 aa9.48□□□□□ -0.89
SAMMSON-202ENST00000488861 MAGI3Q5TCQ9 1506 aa9.48□□□□□ -0.89
SAMMSON-202ENST00000488861 POTEFA5A3E0 1075 aa9.48□□□□□ -0.89
SAMMSON-202ENST00000488861 CHGAP10645 457 aaKnown RBP9.48□□□□□ -0.89
SAMMSON-202ENST00000488861 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.48□□□□□ -0.89
SAMMSON-202ENST00000488861 ARHGEF11O15085 1522 aa9.47□□□□□ -0.89
SAMMSON-202ENST00000488861 CDK13Q14004 1512 aaKnown RBP9.47□□□□□ -0.89
SAMMSON-202ENST00000488861 NCOA2Q15596 1464 aa9.47□□□□□ -0.89
SAMMSON-202ENST00000488861 PLB1Q6P1J6 1458 aa9.47□□□□□ -0.89
SAMMSON-202ENST00000488861 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.47□□□□□ -0.89
SAMMSON-202ENST00000488861 LHX8Q68G74 356 aa9.47□□□□□ -0.89
SAMMSON-202ENST00000488861 COLQQ9Y215 455 aaPredicted RBP9.47□□□□□ -0.89
SAMMSON-202ENST00000488861 SUPT6HQ7KZ85 1726 aaKnown RBP9.46□□□□□ -0.89
SAMMSON-202ENST00000488861 CLASP1Q7Z460 1538 aa9.46□□□□□ -0.89
SAMMSON-202ENST00000488861 ABCA8O94911 1581 aa9.46□□□□□ -0.9
SAMMSON-202ENST00000488861 PDCD7Q8N8D1 485 aaKnown RBP9.45□□□□□ -0.9
SAMMSON-202ENST00000488861 PTPRGP23470 1445 aa9.45□□□□□ -0.9
SAMMSON-202ENST00000488861 NLRP6P59044 892 aa9.44□□□□□ -0.9
SAMMSON-202ENST00000488861 MYOM3Q5VTT5 1437 aa9.44□□□□□ -0.9
SAMMSON-202ENST00000488861 FGD6Q6ZV73 1430 aa9.44□□□□□ -0.9
SAMMSON-202ENST00000488861 MAMSTRQ6ZN01 415 aa9.43□□□□□ -0.9
SAMMSON-202ENST00000488861 CCER1Q8TC90 406 aaPredicted RBP9.43□□□□□ -0.9
SAMMSON-202ENST00000488861 RYDENQ9NUL5 291 aaKnown RBP9.43□□□□□ -0.9
SAMMSON-202ENST00000488861 CDK11AQ9UQ88 783 aaPredicted RBP9.43□□□□□ -0.9
SAMMSON-202ENST00000488861 ARID3CA6NKF2 412 aa9.42□□□□□ -0.9
SAMMSON-202ENST00000488861 L3MBTL3Q96JM7 780 aaPredicted RBP9.42□□□□□ -0.9
SAMMSON-202ENST00000488861 FAM50AQ14320 339 aaKnown RBP9.41□□□□□ -0.9
SAMMSON-202ENST00000488861 TROQ12816 1431 aaPredicted RBP9.41□□□□□ -0.9
SAMMSON-202ENST00000488861 ATP10BO94823 1461 aa9.4□□□□□ -0.9
SAMMSON-202ENST00000488861 ERCC6L2Q5T890 1561 aa9.4□□□□□ -0.9
SAMMSON-202ENST00000488861 UACAQ9BZF9 1416 aa9.4□□□□□ -0.9
SAMMSON-202ENST00000488861 POTEB2H3BUK9 544 aa9.39□□□□□ -0.91
SAMMSON-202ENST00000488861 FBXO22Q8NEZ5 403 aa9.39□□□□□ -0.91
SAMMSON-202ENST00000488861 MFRPQ9BY79 579 aa9.39□□□□□ -0.91
SAMMSON-202ENST00000488861 MIA2Q96PC5 1412 aa9.39□□□□□ -0.91
SAMMSON-202ENST00000488861 TCOF1Q13428 1488 aaKnown RBP9.39□□□□□ -0.91
SAMMSON-202ENST00000488861 PHF8Q9UPP1 1060 aa9.39□□□□□ -0.91
SAMMSON-202ENST00000488861 PTPN23Q9H3S7 1636 aa9.38□□□□□ -0.91
SAMMSON-202ENST00000488861 ITGAEP38570 1179 aa9.38□□□□□ -0.91
SAMMSON-202ENST00000488861 ADCY10Q96PN6 1610 aa9.37□□□□□ -0.91
SAMMSON-202ENST00000488861 PLEKHD1A6NEE1 506 aa9.37□□□□□ -0.91
SAMMSON-202ENST00000488861 SCUBE2Q9NQ36 999 aa9.37□□□□□ -0.91
SAMMSON-202ENST00000488861 SETD5Q9C0A6 1442 aa9.36□□□□□ -0.91
SAMMSON-202ENST00000488861 ABCC2Q92887 1545 aa9.36□□□□□ -0.91
SAMMSON-202ENST00000488861 UHRF1BP1LA0JNW5 1464 aa9.35□□□□□ -0.91
SAMMSON-202ENST00000488861 G3V3G9 751 aa9.35□□□□□ -0.91
SAMMSON-202ENST00000488861 BBXQ8WY36 941 aaPredicted RBP9.35□□□□□ -0.91
SAMMSON-202ENST00000488861 MS4A4AQ96JQ5 239 aa9.35□□□□□ -0.91
SAMMSON-202ENST00000488861 PTPRKQ15262 1439 aa9.34□□□□□ -0.91
SAMMSON-202ENST00000488861 RAB3GAP2Q9H2M9 1393 aa9.34□□□□□ -0.91
SAMMSON-202ENST00000488861 POTEJP0CG39 1038 aa9.34□□□□□ -0.91
SAMMSON-202ENST00000488861 DHX57Q6P158 1386 aaKnown RBP9.33□□□□□ -0.92
SAMMSON-202ENST00000488861 CLSPNQ9HAW4 1339 aa9.33□□□□□ -0.92
SAMMSON-202ENST00000488861 NKX1-1Q15270 411 aaPredicted RBP9.33□□□□□ -0.92
SAMMSON-202ENST00000488861 BOLA1Q9Y3E2 137 aa9.33□□□□□ -0.92
SAMMSON-202ENST00000488861 KIF14Q15058 1648 aa9.33□□□□□ -0.92
SAMMSON-202ENST00000488861 GPATCH8Q9UKJ3 1502 aaKnown RBP9.33□□□□□ -0.92
SAMMSON-202ENST00000488861 ABCC10Q5T3U5 1492 aa9.33□□□□□ -0.92
SAMMSON-202ENST00000488861 TMEM121BQ9BXQ6 578 aaPredicted RBP9.32□□□□□ -0.92
SAMMSON-202ENST00000488861 DPY19L2Q6NUT2 758 aa9.31□□□□□ -0.92
SAMMSON-202ENST00000488861 KDM5BQ9UGL1 1544 aa9.31□□□□□ -0.92
SAMMSON-202ENST00000488861 ITSN2Q9NZM3 1697 aa9.31□□□□□ -0.92
SAMMSON-202ENST00000488861 OTUD5Q96G74 571 aa9.31□□□□□ -0.92
SAMMSON-202ENST00000488861 HFM1A2PYH4 1435 aa9.3□□□□□ -0.92
SAMMSON-202ENST00000488861 C3orf67Q6ZVT6 689 aa9.3□□□□□ -0.92
SAMMSON-202ENST00000488861 PLSCR2Q9NRY7 297 aa9.3□□□□□ -0.92
SAMMSON-202ENST00000488861 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.3□□□□□ -0.92
SAMMSON-202ENST00000488861 CFDP1Q9UEE9 299 aaPredicted RBP9.3□□□□□ -0.92
SAMMSON-202ENST00000488861 AKNAQ7Z591 1439 aa9.29□□□□□ -0.92
SAMMSON-202ENST00000488861 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.29□□□□□ -0.92
SAMMSON-202ENST00000488861 NAIPQ13075 1403 aa9.29□□□□□ -0.92
SAMMSON-202ENST00000488861 ZNF644Q9H582 1327 aaPredicted RBP9.28□□□□□ -0.92
SAMMSON-202ENST00000488861 DNMT1P26358 1616 aaKnown RBP9.28□□□□□ -0.92
SAMMSON-202ENST00000488861 DAPK1P53355 1430 aa9.28□□□□□ -0.92
SAMMSON-202ENST00000488861 CDC42BPAQ5VT25 1732 aa9.28□□□□□ -0.92
SAMMSON-202ENST00000488861 ZCCHC11Q5TAX3 1644 aaKnown RBP9.27□□□□□ -0.92
SAMMSON-202ENST00000488861 CAMSAP2Q08AD1 1489 aa9.27□□□□□ -0.92
SAMMSON-202ENST00000488861 ABCC5O15440 1437 aa9.27□□□□□ -0.93
SAMMSON-202ENST00000488861 MICALL2Q8IY33 904 aa9.27□□□□□ -0.93
SAMMSON-202ENST00000488861 GTPBP6O43824 516 aaPredicted RBP9.26□□□□□ -0.93
SAMMSON-202ENST00000488861 ROCK1Q13464 1354 aa9.26□□□□□ -0.93
SAMMSON-202ENST00000488861 CHIC2Q9UKJ5 165 aa9.25□□□□□ -0.93
SAMMSON-202ENST00000488861 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.25□□□□□ -0.93
SAMMSON-202ENST00000488861 RRP7BPQ9NSQ0 103 aa9.24□□□□□ -0.93
SAMMSON-202ENST00000488861 GCC2Q8IWJ2 1684 aa9.24□□□□□ -0.93
SAMMSON-202ENST00000488861 CDC42BPBQ9Y5S2 1711 aa9.24□□□□□ -0.93
SAMMSON-202ENST00000488861 PREX2Q70Z35 1606 aa9.24□□□□□ -0.93
SAMMSON-202ENST00000488861 MAPKBP1O60336 1514 aa9.24□□□□□ -0.93
SAMMSON-202ENST00000488861 ZNF777Q9ULD5 760 aaPredicted RBP9.23□□□□□ -0.93
SAMMSON-202ENST00000488861 TTC37Q6PGP7 1564 aa9.23□□□□□ -0.93
SAMMSON-202ENST00000488861 ACIN1Q9UKV3 1341 aaKnown RBP9.22□□□□□ -0.93
SAMMSON-202ENST00000488861 ADGRL2O95490 1459 aa9.22□□□□□ -0.93
SAMMSON-202ENST00000488861 SPRYD3Q8NCJ5 442 aa9.22□□□□□ -0.93
SAMMSON-202ENST00000488861 KCNH8Q96L42 1107 aa9.22□□□□□ -0.93
SAMMSON-202ENST00000488861 ARHGEF5Q12774 1597 aa9.21□□□□□ -0.93
SAMMSON-202ENST00000488861 MBD5Q9P267 1494 aa9.21□□□□□ -0.93
SAMMSON-202ENST00000488861 CROCC2H7BZ55 1655 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms