RNA–Protein interactions for RNA: ENST00000488836.3

RN7SL28P-201, Transcript of RNA, 7SL, cytoplasmic 28, pseudogene, humanhuman

BASIC

Gene RN7SL28P, Length 298 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL28P-201ENST00000488836 CCDC141Q6ZP82 1450 aa13.65□□□□□ -0.22
RN7SL28P-201ENST00000488836 ZNF335Q9H4Z2 1342 aaPredicted RBP13.64□□□□□ -0.23
RN7SL28P-201ENST00000488836 ZNF644Q9H582 1327 aaPredicted RBP13.64□□□□□ -0.23
RN7SL28P-201ENST00000488836 UBAP1LF5GYI3 381 aa13.63□□□□□ -0.23
RN7SL28P-201ENST00000488836 KDM5DQ9BY66 1539 aa13.63□□□□□ -0.23
RN7SL28P-201ENST00000488836 DNMT1P26358 1616 aaKnown RBP13.62□□□□□ -0.23
RN7SL28P-201ENST00000488836 KIF3BO15066 747 aa13.62□□□□□ -0.23
RN7SL28P-201ENST00000488836 PZPP20742 1482 aa13.61□□□□□ -0.23
RN7SL28P-201ENST00000488836 TNRQ92752 1358 aa13.61□□□□□ -0.23
RN7SL28P-201ENST00000488836 ILDR2Q71H61 639 aa13.61□□□□□ -0.23
RN7SL28P-201ENST00000488836 WASHC2CQ9Y4E1 1318 aa13.61□□□□□ -0.23
RN7SL28P-201ENST00000488836 CAMSAP2Q08AD1 1489 aa13.61□□□□□ -0.23
RN7SL28P-201ENST00000488836 NCOA2Q15596 1464 aa13.61□□□□□ -0.23
RN7SL28P-201ENST00000488836 POLR1AO95602 1720 aaPredicted RBP13.6□□□□□ -0.23
RN7SL28P-201ENST00000488836 TSPY4P0CV99 314 aa13.6□□□□□ -0.23
RN7SL28P-201ENST00000488836 TSPY10P0CW01 314 aa13.6□□□□□ -0.23
RN7SL28P-201ENST00000488836 ARHGEF5Q12774 1597 aa13.59□□□□□ -0.23
RN7SL28P-201ENST00000488836 CPS1P31327 1500 aa13.59□□□□□ -0.23
RN7SL28P-201ENST00000488836 THEMISQ8N1K5 641 aaPredicted RBP13.58□□□□□ -0.24
RN7SL28P-201ENST00000488836 NLRP1Q9C000 1473 aa13.58□□□□□ -0.24
RN7SL28P-201ENST00000488836 ANKLE2Q86XL3 938 aa13.57□□□□□ -0.24
RN7SL28P-201ENST00000488836 TOM1O60784 492 aa13.56□□□□□ -0.24
RN7SL28P-201ENST00000488836 MIA2Q96PC5 1412 aa13.56□□□□□ -0.24
RN7SL28P-201ENST00000488836 FBXO31Q5XUX0 539 aaPredicted RBP13.55□□□□□ -0.24
RN7SL28P-201ENST00000488836 SHANK2Q9UPX8 1470 aa13.55□□□□□ -0.24
RN7SL28P-201ENST00000488836 UGGT1Q9NYU2 1555 aa13.54□□□□□ -0.24
RN7SL28P-201ENST00000488836 ZC3H13Q5T200 1668 aaKnown RBP13.54□□□□□ -0.24
RN7SL28P-201ENST00000488836 NEURL4Q96JN8 1562 aa13.54□□□□□ -0.24
RN7SL28P-201ENST00000488836 DEPDC5O75140 1603 aa13.53□□□□□ -0.24
RN7SL28P-201ENST00000488836 PIAS4Q8N2W9 510 aaPredicted RBP13.52□□□□□ -0.25
RN7SL28P-201ENST00000488836 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.52□□□□□ -0.25
RN7SL28P-201ENST00000488836 MED14O60244 1454 aa13.52□□□□□ -0.25
RN7SL28P-201ENST00000488836 MAST1Q9Y2H9 1570 aa13.52□□□□□ -0.25
RN7SL28P-201ENST00000488836 RNF17Q9BXT8 1623 aaKnown RBP13.52□□□□□ -0.25
RN7SL28P-201ENST00000488836 EIF2AK4Q9P2K8 1649 aaKnown RBP13.52□□□□□ -0.25
RN7SL28P-201ENST00000488836 LRRC9Q6ZRR7 1453 aa13.51□□□□□ -0.25
RN7SL28P-201ENST00000488836 VPS8Q8N3P4 1428 aa13.51□□□□□ -0.25
RN7SL28P-201ENST00000488836 SCAF1Q9H7N4 1312 aaKnown RBP13.51□□□□□ -0.25
RN7SL28P-201ENST00000488836 NPHP4O75161 1426 aaPredicted RBP13.5□□□□□ -0.25
RN7SL28P-201ENST00000488836 MAP3K1Q13233 1512 aa13.49□□□□□ -0.25
RN7SL28P-201ENST00000488836 PIP4K2BP78356 416 aa13.49□□□□□ -0.25
RN7SL28P-201ENST00000488836 ABCC3O15438 1527 aa13.49□□□□□ -0.25
RN7SL28P-201ENST00000488836 IQGAP1P46940 1657 aa13.48□□□□□ -0.25
RN7SL28P-201ENST00000488836 VWDEQ8N2E2 1590 aa13.48□□□□□ -0.25
RN7SL28P-201ENST00000488836 MYOM3Q5VTT5 1437 aa13.47□□□□□ -0.25
RN7SL28P-201ENST00000488836 HSPA1LP34931 641 aa13.46□□□□□ -0.25
RN7SL28P-201ENST00000488836 DUOX2Q9NRD8 1548 aa13.45□□□□□ -0.26
RN7SL28P-201ENST00000488836 ERVK-7P63135 1459 aa13.45□□□□□ -0.26
RN7SL28P-201ENST00000488836 SYNMO15061 1565 aa13.45□□□□□ -0.26
RN7SL28P-201ENST00000488836 MED1Q15648 1581 aaPredicted RBP13.42□□□□□ -0.26
RN7SL28P-201ENST00000488836 MROH1Q8NDA8 1641 aa13.42□□□□□ -0.26
RN7SL28P-201ENST00000488836 CEP152O94986 1710 aa13.42□□□□□ -0.26
RN7SL28P-201ENST00000488836 UBR1Q8IWV7 1749 aa13.42□□□□□ -0.26
RN7SL28P-201ENST00000488836 ARHGAP31Q2M1Z3 1444 aa13.41□□□□□ -0.26
RN7SL28P-201ENST00000488836 ERBINQ96RT1 1412 aa13.41□□□□□ -0.26
RN7SL28P-201ENST00000488836 APLP2Q06481 763 aa13.41□□□□□ -0.26
RN7SL28P-201ENST00000488836 SCAF11Q99590 1463 aaKnown RBP13.41□□□□□ -0.26
RN7SL28P-201ENST00000488836 PRDM15P57071 1507 aaPredicted RBP13.4□□□□□ -0.26
RN7SL28P-201ENST00000488836 EID1Q9Y6B2 187 aa13.4□□□□□ -0.26
RN7SL28P-201ENST00000488836 KANK1Q14678 1352 aa13.4□□□□□ -0.26
RN7SL28P-201ENST00000488836 KIF15Q9NS87 1388 aa13.4□□□□□ -0.26
RN7SL28P-201ENST00000488836 LRRC7Q96NW7 1537 aa13.39□□□□□ -0.27
RN7SL28P-201ENST00000488836 KANK4Q5T7N3 995 aaPredicted RBP13.39□□□□□ -0.27
RN7SL28P-201ENST00000488836 SLIT1O75093 1534 aa13.39□□□□□ -0.27
RN7SL28P-201ENST00000488836 CROCC2H7BZ55 1655 aa13.38□□□□□ -0.27
RN7SL28P-201ENST00000488836 TXNDC2Q86VQ3 553 aa13.38□□□□□ -0.27
RN7SL28P-201ENST00000488836 ARHGAP23Q9P227 1491 aa13.37□□□□□ -0.27
RN7SL28P-201ENST00000488836 CFAP65Q6ZU64 1925 aaKnown RBP13.37□□□□□ -0.27
RN7SL28P-201ENST00000488836 STRCP1A6NGW2 1772 aa13.36□□□□□ -0.27
RN7SL28P-201ENST00000488836 STAG3Q9UJ98 1225 aa13.36□□□□□ -0.27
RN7SL28P-201ENST00000488836 KDM5AP29375 1690 aaKnown RBP13.36□□□□□ -0.27
RN7SL28P-201ENST00000488836 PTPN23Q9H3S7 1636 aa13.35□□□□□ -0.27
RN7SL28P-201ENST00000488836 ALKQ9UM73 1620 aa13.35□□□□□ -0.27
RN7SL28P-201ENST00000488836 LOC105371045A0A1W2PR82 267 aa13.35□□□□□ -0.27
RN7SL28P-201ENST00000488836 RRP7BPQ9NSQ0 103 aa13.35□□□□□ -0.27
RN7SL28P-201ENST00000488836 ABCC5O15440 1437 aa13.35□□□□□ -0.27
RN7SL28P-201ENST00000488836 DAPK1P53355 1430 aa13.34□□□□□ -0.27
RN7SL28P-201ENST00000488836 KCNA4P22459 653 aa13.34□□□□□ -0.27
RN7SL28P-201ENST00000488836 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.34□□□□□ -0.27
RN7SL28P-201ENST00000488836 ANKRD30AQ9BXX3 1397 aa13.33□□□□□ -0.27
RN7SL28P-201ENST00000488836 TMEM2Q9UHN6 1383 aa13.33□□□□□ -0.27
RN7SL28P-201ENST00000488836 LTKP29376 864 aa13.33□□□□□ -0.28
RN7SL28P-201ENST00000488836 PIK3C2BO00750 1634 aa13.32□□□□□ -0.28
RN7SL28P-201ENST00000488836 EFCAB6Q5THR3 1501 aa13.32□□□□□ -0.28
RN7SL28P-201ENST00000488836 LMTK2Q8IWU2 1503 aa13.32□□□□□ -0.28
RN7SL28P-201ENST00000488836 FGD6Q6ZV73 1430 aa13.31□□□□□ -0.28
RN7SL28P-201ENST00000488836 SLC52A1Q9NWF4 448 aa13.29□□□□□ -0.28
RN7SL28P-201ENST00000488836 FAM135BQ49AJ0 1406 aa13.28□□□□□ -0.28
RN7SL28P-201ENST00000488836 KCNA6P17658 529 aa13.27□□□□□ -0.29
RN7SL28P-201ENST00000488836 IDI1Q13907 227 aa13.27□□□□□ -0.29
RN7SL28P-201ENST00000488836 XIRP1Q702N8 1843 aaKnown RBP13.27□□□□□ -0.29
RN7SL28P-201ENST00000488836 ADGRB3O60242 1522 aa13.26□□□□□ -0.29
RN7SL28P-201ENST00000488836 HDGFP51858 240 aaKnown RBP13.26□□□□□ -0.29
RN7SL28P-201ENST00000488836 RPRD2Q5VT52 1461 aaKnown RBP13.26□□□□□ -0.29
RN7SL28P-201ENST00000488836 CHIC2Q9UKJ5 165 aa13.26□□□□□ -0.29
RN7SL28P-201ENST00000488836 ADGRL2O95490 1459 aa13.25□□□□□ -0.29
RN7SL28P-201ENST00000488836 NKTRP30414 1462 aaKnown RBP13.25□□□□□ -0.29
RN7SL28P-201ENST00000488836 NOS1P29475 1434 aa13.25□□□□□ -0.29
RN7SL28P-201ENST00000488836 TMEM94Q12767 1356 aa13.25□□□□□ -0.29
RN7SL28P-201ENST00000488836 PROSER2Q86WR7 435 aaPredicted RBP13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms