RNA–Protein interactions for RNA: ENST00000488774.1

PTPRD-212, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 3

Gene PTPRD, Length 420 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-212ENST00000488774 RRP7BPQ9NSQ0 103 aa10.13□□□□□ -0.79
PTPRD-212ENST00000488774 SETD1BQ9UPS6 1966 aaKnown RBP10.13□□□□□ -0.79
PTPRD-212ENST00000488774 NCOA1Q15788 1441 aa10.13□□□□□ -0.79
PTPRD-212ENST00000488774 STRCQ7RTU9 1775 aa10.13□□□□□ -0.79
PTPRD-212ENST00000488774 DUOX2Q9NRD8 1548 aa10.12□□□□□ -0.79
PTPRD-212ENST00000488774 CAMSAP1Q5T5Y3 1602 aa10.12□□□□□ -0.79
PTPRD-212ENST00000488774 KIF15Q9NS87 1388 aa10.12□□□□□ -0.79
PTPRD-212ENST00000488774 ABCC3O15438 1527 aa10.12□□□□□ -0.79
PTPRD-212ENST00000488774 VWDEQ8N2E2 1590 aa10.11□□□□□ -0.79
PTPRD-212ENST00000488774 GGT6Q6P531 493 aa10.11□□□□□ -0.79
PTPRD-212ENST00000488774 PRDM15P57071 1507 aaPredicted RBP10.11□□□□□ -0.79
PTPRD-212ENST00000488774 GCC2Q8IWJ2 1684 aa10.1□□□□□ -0.79
PTPRD-212ENST00000488774 KIF3BO15066 747 aa10.1□□□□□ -0.79
PTPRD-212ENST00000488774 MYO3AQ8NEV4 1616 aa10.1□□□□□ -0.79
PTPRD-212ENST00000488774 MYO5BQ9ULV0 1848 aa10.1□□□□□ -0.79
PTPRD-212ENST00000488774 TSPY4P0CV99 314 aa10.09□□□□□ -0.79
PTPRD-212ENST00000488774 TSPY10P0CW01 314 aa10.09□□□□□ -0.79
PTPRD-212ENST00000488774 ITGAEP38570 1179 aa10.09□□□□□ -0.79
PTPRD-212ENST00000488774 RSPH4AQ5TD94 716 aa10.09□□□□□ -0.79
PTPRD-212ENST00000488774 UNC13BO14795 1591 aa10.09□□□□□ -0.79
PTPRD-212ENST00000488774 ZC3H13Q5T200 1668 aaKnown RBP10.09□□□□□ -0.79
PTPRD-212ENST00000488774 KDM5DQ9BY66 1539 aa10.08□□□□□ -0.8
PTPRD-212ENST00000488774 FBXO31Q5XUX0 539 aaPredicted RBP10.08□□□□□ -0.8
PTPRD-212ENST00000488774 ZMYM3Q14202 1370 aa10.08□□□□□ -0.8
PTPRD-212ENST00000488774 ZNF142P52746 1687 aaPredicted RBP10.08□□□□□ -0.8
PTPRD-212ENST00000488774 E9PCH4 1651 aa10.07□□□□□ -0.8
PTPRD-212ENST00000488774 HSPA2P54652 639 aa10.07□□□□□ -0.8
PTPRD-212ENST00000488774 ERBINQ96RT1 1412 aa10.07□□□□□ -0.8
PTPRD-212ENST00000488774 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.06□□□□□ -0.8
PTPRD-212ENST00000488774 SYNMO15061 1565 aa10.05□□□□□ -0.8
PTPRD-212ENST00000488774 IQGAP3Q86VI3 1631 aa10.04□□□□□ -0.8
PTPRD-212ENST00000488774 ANKRD30AQ9BXX3 1397 aa10.04□□□□□ -0.8
PTPRD-212ENST00000488774 NAIPQ13075 1403 aa10.04□□□□□ -0.8
PTPRD-212ENST00000488774 PZPP20742 1482 aa10.04□□□□□ -0.8
PTPRD-212ENST00000488774 TET3O43151 1660 aa10.03□□□□□ -0.8
PTPRD-212ENST00000488774 SPATA31D1Q6ZQQ2 1576 aa10.03□□□□□ -0.8
PTPRD-212ENST00000488774 CNTLNQ9NXG0 1405 aa10.03□□□□□ -0.8
PTPRD-212ENST00000488774 ANKRD50Q9ULJ7 1429 aa10.03□□□□□ -0.8
PTPRD-212ENST00000488774 EFCAB6Q5THR3 1501 aa10.02□□□□□ -0.8
PTPRD-212ENST00000488774 ROCK1Q13464 1354 aa10.02□□□□□ -0.8
PTPRD-212ENST00000488774 UBR1Q8IWV7 1749 aa10.02□□□□□ -0.8
PTPRD-212ENST00000488774 CEP170BQ9Y4F5 1589 aaPredicted RBP10.02□□□□□ -0.81
PTPRD-212ENST00000488774 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.02□□□□□ -0.81
PTPRD-212ENST00000488774 LMTK2Q8IWU2 1503 aa10.02□□□□□ -0.81
PTPRD-212ENST00000488774 UGGT1Q9NYU2 1555 aa10.01□□□□□ -0.81
PTPRD-212ENST00000488774 NPATQ14207 1427 aa10.01□□□□□ -0.81
PTPRD-212ENST00000488774 PIK3C2BO00750 1634 aa10.01□□□□□ -0.81
PTPRD-212ENST00000488774 ERVK-7P63135 1459 aa10.01□□□□□ -0.81
PTPRD-212ENST00000488774 FAM135AQ9P2D6 1515 aa10.01□□□□□ -0.81
PTPRD-212ENST00000488774 POLR1AO95602 1720 aaPredicted RBP10□□□□□ -0.81
PTPRD-212ENST00000488774 WASHC2CQ9Y4E1 1318 aa10□□□□□ -0.81
PTPRD-212ENST00000488774 NEURL4Q96JN8 1562 aa9.99□□□□□ -0.81
PTPRD-212ENST00000488774 SPHKAPQ2M3C7 1700 aa9.98□□□□□ -0.81
PTPRD-212ENST00000488774 STRCP1A6NGW2 1772 aa9.97□□□□□ -0.81
PTPRD-212ENST00000488774 HFM1A2PYH4 1435 aa9.97□□□□□ -0.81
PTPRD-212ENST00000488774 UHRF1BP1Q6BDS2 1440 aa9.97□□□□□ -0.81
PTPRD-212ENST00000488774 PPP6R1Q9UPN7 881 aa9.96□□□□□ -0.82
PTPRD-212ENST00000488774 TNRQ92752 1358 aa9.96□□□□□ -0.82
PTPRD-212ENST00000488774 ARHGAP31Q2M1Z3 1444 aa9.96□□□□□ -0.82
PTPRD-212ENST00000488774 ESF1Q9H501 851 aaKnown RBP9.95□□□□□ -0.82
PTPRD-212ENST00000488774 NOS1P29475 1434 aa9.95□□□□□ -0.82
PTPRD-212ENST00000488774 A2ML1A8K2U0 1454 aa9.95□□□□□ -0.82
PTPRD-212ENST00000488774 TMEM131LA2VDJ0 1609 aa9.94□□□□□ -0.82
PTPRD-212ENST00000488774 CLTCL1P53675 1640 aa9.94□□□□□ -0.82
PTPRD-212ENST00000488774 PLA2R1Q13018 1463 aa9.93□□□□□ -0.82
PTPRD-212ENST00000488774 NCKAP5LQ9HCH0 1330 aa9.93□□□□□ -0.82
PTPRD-212ENST00000488774 NUP155O75694 1391 aa9.92□□□□□ -0.82
PTPRD-212ENST00000488774 KDM5AP29375 1690 aaKnown RBP9.91□□□□□ -0.82
PTPRD-212ENST00000488774 XIRP1Q702N8 1843 aaKnown RBP9.91□□□□□ -0.82
PTPRD-212ENST00000488774 ADGRB3O60242 1522 aa9.9□□□□□ -0.82
PTPRD-212ENST00000488774 NLRP1Q9C000 1473 aa9.9□□□□□ -0.83
PTPRD-212ENST00000488774 IQGAP1P46940 1657 aa9.9□□□□□ -0.83
PTPRD-212ENST00000488774 KANK1Q14678 1352 aa9.89□□□□□ -0.83
PTPRD-212ENST00000488774 IDI1Q13907 227 aa9.89□□□□□ -0.83
PTPRD-212ENST00000488774 ARHGAP23Q9P227 1491 aa9.89□□□□□ -0.83
PTPRD-212ENST00000488774 LTBP4Q8N2S1 1624 aa9.89□□□□□ -0.83
PTPRD-212ENST00000488774 KIF1BO60333 1816 aa9.89□□□□□ -0.83
PTPRD-212ENST00000488774 RAB3GAP2Q9H2M9 1393 aa9.88□□□□□ -0.83
PTPRD-212ENST00000488774 RPRD2Q5VT52 1461 aaKnown RBP9.88□□□□□ -0.83
PTPRD-212ENST00000488774 PTPRTO14522 1441 aa9.88□□□□□ -0.83
PTPRD-212ENST00000488774 SLIT1O75093 1534 aa9.87□□□□□ -0.83
PTPRD-212ENST00000488774 NRXN3Q9Y4C0 1643 aa9.87□□□□□ -0.83
PTPRD-212ENST00000488774 LTKP29376 864 aa9.87□□□□□ -0.83
PTPRD-212ENST00000488774 SETD5Q9C0A6 1442 aa9.87□□□□□ -0.83
PTPRD-212ENST00000488774 TRPM2O94759 1503 aa9.87□□□□□ -0.83
PTPRD-212ENST00000488774 IFT172Q9UG01 1749 aa9.86□□□□□ -0.83
PTPRD-212ENST00000488774 ZFYVE9O95405 1425 aa9.85□□□□□ -0.83
PTPRD-212ENST00000488774 PPLO60437 1756 aa9.85□□□□□ -0.83
PTPRD-212ENST00000488774 SETD1AO15047 1707 aaKnown RBP9.85□□□□□ -0.83
PTPRD-212ENST00000488774 PKD2Q13563 968 aa9.84□□□□□ -0.83
PTPRD-212ENST00000488774 MED14O60244 1454 aa9.84□□□□□ -0.83
PTPRD-212ENST00000488774 TRIM52Q96A61 297 aa9.83□□□□□ -0.84
PTPRD-212ENST00000488774 ZNF335Q9H4Z2 1342 aaPredicted RBP9.82□□□□□ -0.84
PTPRD-212ENST00000488774 NEXMIFQ5QGS0 1516 aa9.82□□□□□ -0.84
PTPRD-212ENST00000488774 CHD2O14647 1828 aaKnown RBP9.82□□□□□ -0.84
PTPRD-212ENST00000488774 NUTM2DQ5VT03 806 aaPredicted RBP9.82□□□□□ -0.84
PTPRD-212ENST00000488774 TMEM2Q9UHN6 1383 aa9.82□□□□□ -0.84
PTPRD-212ENST00000488774 ALKQ9UM73 1620 aa9.82□□□□□ -0.84
PTPRD-212ENST00000488774 SCAF11Q99590 1463 aaKnown RBP9.81□□□□□ -0.84
PTPRD-212ENST00000488774 MPHOSPH9Q99550 1183 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms