RNA–Protein interactions for RNA: ENST00000488758.1

APOBEC3A-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3A, humanhuman

TSL 2

Gene APOBEC3A, Length 344 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3A-203ENST00000488758 NAIPQ13075 1403 aa11.19□□□□□ -0.62
APOBEC3A-203ENST00000488758 TRAPPC8Q9Y2L5 1435 aa11.19□□□□□ -0.62
APOBEC3A-203ENST00000488758 CROCC2H7BZ55 1655 aa11.19□□□□□ -0.62
APOBEC3A-203ENST00000488758 NCOA1Q15788 1441 aa11.18□□□□□ -0.62
APOBEC3A-203ENST00000488758 ACIN1Q9UKV3 1341 aaKnown RBP11.18□□□□□ -0.62
APOBEC3A-203ENST00000488758 ADGRL2O95490 1459 aa11.18□□□□□ -0.62
APOBEC3A-203ENST00000488758 ADGBQ8N7X0 1667 aa11.17□□□□□ -0.62
APOBEC3A-203ENST00000488758 DENND4BO75064 1496 aaPredicted RBP11.17□□□□□ -0.62
APOBEC3A-203ENST00000488758 TRIM52Q96A61 297 aa11.16□□□□□ -0.62
APOBEC3A-203ENST00000488758 COL17A1Q9UMD9 1497 aaPredicted RBP11.16□□□□□ -0.62
APOBEC3A-203ENST00000488758 MAST1Q9Y2H9 1570 aa11.16□□□□□ -0.62
APOBEC3A-203ENST00000488758 KIF15Q9NS87 1388 aa11.16□□□□□ -0.62
APOBEC3A-203ENST00000488758 ZNF518AQ6AHZ1 1483 aa11.15□□□□□ -0.62
APOBEC3A-203ENST00000488758 RAPGEF3O95398 923 aa11.15□□□□□ -0.62
APOBEC3A-203ENST00000488758 RTEL1-TNFRSF6BF6WH68 1400 aa11.15□□□□□ -0.62
APOBEC3A-203ENST00000488758 GCC2Q8IWJ2 1684 aa11.14□□□□□ -0.63
APOBEC3A-203ENST00000488758 POGZQ7Z3K3 1410 aa11.14□□□□□ -0.63
APOBEC3A-203ENST00000488758 ANKRD50Q9ULJ7 1429 aa11.13□□□□□ -0.63
APOBEC3A-203ENST00000488758 PLXNC1O60486 1568 aa11.11□□□□□ -0.63
APOBEC3A-203ENST00000488758 ATP7AQ04656 1500 aa11.1□□□□□ -0.63
APOBEC3A-203ENST00000488758 DUOX2Q9NRD8 1548 aa11.1□□□□□ -0.63
APOBEC3A-203ENST00000488758 ZEB1P37275 1124 aaPredicted RBP11.1□□□□□ -0.63
APOBEC3A-203ENST00000488758 DHX57Q6P158 1386 aaKnown RBP11.1□□□□□ -0.63
APOBEC3A-203ENST00000488758 MLH3Q9UHC1 1453 aa11.1□□□□□ -0.63
APOBEC3A-203ENST00000488758 ZFYVE16Q7Z3T8 1539 aa11.09□□□□□ -0.63
APOBEC3A-203ENST00000488758 KDM5CP41229 1560 aa11.08□□□□□ -0.64
APOBEC3A-203ENST00000488758 INO80Q9ULG1 1556 aaPredicted RBP11.08□□□□□ -0.64
APOBEC3A-203ENST00000488758 RBM42Q9BTD8 480 aaKnown RBP11.08□□□□□ -0.64
APOBEC3A-203ENST00000488758 RICTORQ6R327 1708 aa11.07□□□□□ -0.64
APOBEC3A-203ENST00000488758 DHX29Q7Z478 1369 aaKnown RBP11.07□□□□□ -0.64
APOBEC3A-203ENST00000488758 MPHOSPH9Q99550 1183 aa11.07□□□□□ -0.64
APOBEC3A-203ENST00000488758 KIDINS220Q9ULH0 1771 aa11.07□□□□□ -0.64
APOBEC3A-203ENST00000488758 ERBINQ96RT1 1412 aa11.07□□□□□ -0.64
APOBEC3A-203ENST00000488758 CLSPNQ9HAW4 1339 aa11.07□□□□□ -0.64
APOBEC3A-203ENST00000488758 NUP155O75694 1391 aa11.06□□□□□ -0.64
APOBEC3A-203ENST00000488758 KIF3BO15066 747 aa11.06□□□□□ -0.64
APOBEC3A-203ENST00000488758 A2MP01023 1474 aa11.06□□□□□ -0.64
APOBEC3A-203ENST00000488758 MAGI2Q86UL8 1455 aa11.05□□□□□ -0.64
APOBEC3A-203ENST00000488758 FRMPD1Q5SYB0 1578 aa11.03□□□□□ -0.64
APOBEC3A-203ENST00000488758 ZMYM4Q5VZL5 1548 aa11.03□□□□□ -0.64
APOBEC3A-203ENST00000488758 MKRN4PQ13434 485 aaPredicted RBP11.02□□□□□ -0.65
APOBEC3A-203ENST00000488758 KANK1Q14678 1352 aa11.02□□□□□ -0.65
APOBEC3A-203ENST00000488758 YEATS2Q9ULM3 1422 aa11.01□□□□□ -0.65
APOBEC3A-203ENST00000488758 ATP10AO60312 1499 aa11.01□□□□□ -0.65
APOBEC3A-203ENST00000488758 PKD2Q13563 968 aa11.01□□□□□ -0.65
APOBEC3A-203ENST00000488758 GGT6Q6P531 493 aa11.01□□□□□ -0.65
APOBEC3A-203ENST00000488758 FBXO41Q8TF61 875 aa11.01□□□□□ -0.65
APOBEC3A-203ENST00000488758 ABCA6Q8N139 1617 aa11.01□□□□□ -0.65
APOBEC3A-203ENST00000488758 DIP2CQ9Y2E4 1556 aa11□□□□□ -0.65
APOBEC3A-203ENST00000488758 UNC13BO14795 1591 aa10.99□□□□□ -0.65
APOBEC3A-203ENST00000488758 EIF2AK4Q9P2K8 1649 aaKnown RBP10.99□□□□□ -0.65
APOBEC3A-203ENST00000488758 NEUROD1Q13562 356 aa10.99□□□□□ -0.65
APOBEC3A-203ENST00000488758 PZPP20742 1482 aa10.99□□□□□ -0.65
APOBEC3A-203ENST00000488758 KDM5DQ9BY66 1539 aa10.99□□□□□ -0.65
APOBEC3A-203ENST00000488758 SIN3AQ96ST3 1273 aa10.97□□□□□ -0.65
APOBEC3A-203ENST00000488758 FAM135AQ9P2D6 1515 aa10.97□□□□□ -0.65
APOBEC3A-203ENST00000488758 IQGAP3Q86VI3 1631 aa10.95□□□□□ -0.66
APOBEC3A-203ENST00000488758 ARID4BQ4LE39 1312 aaPredicted RBP10.95□□□□□ -0.66
APOBEC3A-203ENST00000488758 WASHC2CQ9Y4E1 1318 aa10.95□□□□□ -0.66
APOBEC3A-203ENST00000488758 DEPDC5O75140 1603 aa10.95□□□□□ -0.66
APOBEC3A-203ENST00000488758 ARHGEF40Q8TER5 1519 aa10.94□□□□□ -0.66
APOBEC3A-203ENST00000488758 ADAMTSL3P82987 1691 aa10.94□□□□□ -0.66
APOBEC3A-203ENST00000488758 REREQ9P2R6 1566 aa10.94□□□□□ -0.66
APOBEC3A-203ENST00000488758 AGLP35573 1532 aa10.94□□□□□ -0.66
APOBEC3A-203ENST00000488758 ANKRD30BQ9BXX2 1392 aa10.93□□□□□ -0.66
APOBEC3A-203ENST00000488758 BCORL1Q5H9F3 1711 aa10.93□□□□□ -0.66
APOBEC3A-203ENST00000488758 MLECQ14165 292 aa10.93□□□□□ -0.66
APOBEC3A-203ENST00000488758 TIMELESSQ9UNS1 1208 aa10.93□□□□□ -0.66
APOBEC3A-203ENST00000488758 RNF17Q9BXT8 1623 aaKnown RBP10.93□□□□□ -0.66
APOBEC3A-203ENST00000488758 ESF1Q9H501 851 aaKnown RBP10.92□□□□□ -0.66
APOBEC3A-203ENST00000488758 PRDM15P57071 1507 aaPredicted RBP10.92□□□□□ -0.66
APOBEC3A-203ENST00000488758 PTPRMP28827 1452 aa10.92□□□□□ -0.66
APOBEC3A-203ENST00000488758 VWDEQ8N2E2 1590 aa10.91□□□□□ -0.66
APOBEC3A-203ENST00000488758 MROH1Q8NDA8 1641 aa10.91□□□□□ -0.66
APOBEC3A-203ENST00000488758 MADDQ8WXG6 1647 aa10.91□□□□□ -0.66
APOBEC3A-203ENST00000488758 TONSLQ96HA7 1378 aa10.9□□□□□ -0.66
APOBEC3A-203ENST00000488758 LMTK2Q8IWU2 1503 aa10.89□□□□□ -0.67
APOBEC3A-203ENST00000488758 TET3O43151 1660 aa10.89□□□□□ -0.67
APOBEC3A-203ENST00000488758 RIMS1Q86UR5 1692 aaKnown RBP10.89□□□□□ -0.67
APOBEC3A-203ENST00000488758 SPDYE2BA6NHP3 402 aa10.88□□□□□ -0.67
APOBEC3A-203ENST00000488758 CEP152O94986 1710 aa10.88□□□□□ -0.67
APOBEC3A-203ENST00000488758 SPDYE6P0CI01 402 aa10.88□□□□□ -0.67
APOBEC3A-203ENST00000488758 SPDYE2Q495Y8 402 aa10.88□□□□□ -0.67
APOBEC3A-203ENST00000488758 AKT1S1Q96B36 256 aa10.88□□□□□ -0.67
APOBEC3A-203ENST00000488758 CCDC144AA2RUR9 1427 aa10.87□□□□□ -0.67
APOBEC3A-203ENST00000488758 E9PCH4 1651 aa10.87□□□□□ -0.67
APOBEC3A-203ENST00000488758 ABCC3O15438 1527 aa10.87□□□□□ -0.67
APOBEC3A-203ENST00000488758 RPRD2Q5VT52 1461 aaKnown RBP10.87□□□□□ -0.67
APOBEC3A-203ENST00000488758 LMTK3Q96Q04 1460 aa10.87□□□□□ -0.67
APOBEC3A-203ENST00000488758 ZC3H13Q5T200 1668 aaKnown RBP10.85□□□□□ -0.67
APOBEC3A-203ENST00000488758 EFCAB6Q5THR3 1501 aa10.85□□□□□ -0.67
APOBEC3A-203ENST00000488758 SIGLEC1Q9BZZ2 1709 aa10.85□□□□□ -0.67
APOBEC3A-203ENST00000488758 PPP1R15AO75807 674 aaPredicted RBP10.85□□□□□ -0.67
APOBEC3A-203ENST00000488758 PLA2R1Q13018 1463 aa10.85□□□□□ -0.67
APOBEC3A-203ENST00000488758 PTPRTO14522 1441 aa10.84□□□□□ -0.67
APOBEC3A-203ENST00000488758 L3MBTL2Q969R5 705 aa10.84□□□□□ -0.67
APOBEC3A-203ENST00000488758 CFAP65Q6ZU64 1925 aaKnown RBP10.84□□□□□ -0.67
APOBEC3A-203ENST00000488758 CAMSAP1Q5T5Y3 1602 aa10.84□□□□□ -0.67
APOBEC3A-203ENST00000488758 NPATQ14207 1427 aa10.84□□□□□ -0.67
APOBEC3A-203ENST00000488758 ARHGAP31Q2M1Z3 1444 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms