RNA–Protein interactions for RNA: ENST00000488571.1

SNU13-208, Transcript of small nuclear ribonucleoprotein 13, humanhuman

TSL 5

Gene SNU13, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-208ENST00000488571 ZNF644Q9H582 1327 aaPredicted RBP18.41■□□□□ 0.54
SNU13-208ENST00000488571 MBD5Q9P267 1494 aa18.4■□□□□ 0.54
SNU13-208ENST00000488571 EHBP1L1Q8N3D4 1523 aa18.39■□□□□ 0.54
SNU13-208ENST00000488571 CEP170BQ9Y4F5 1589 aaPredicted RBP18.39■□□□□ 0.53
SNU13-208ENST00000488571 GGT6Q6P531 493 aa18.38■□□□□ 0.53
SNU13-208ENST00000488571 NCKAP5LQ9HCH0 1330 aa18.38■□□□□ 0.53
SNU13-208ENST00000488571 PLA2R1Q13018 1463 aa18.38■□□□□ 0.53
SNU13-208ENST00000488571 DISP3Q9P2K9 1392 aa18.37■□□□□ 0.53
SNU13-208ENST00000488571 TCOF1Q13428 1488 aaKnown RBP18.36■□□□□ 0.53
SNU13-208ENST00000488571 CEP162Q5TB80 1403 aa18.36■□□□□ 0.53
SNU13-208ENST00000488571 ILDR2Q71H61 639 aa18.36■□□□□ 0.53
SNU13-208ENST00000488571 RTEL1-TNFRSF6BF6WH68 1400 aa18.35■□□□□ 0.53
SNU13-208ENST00000488571 ZNF335Q9H4Z2 1342 aaPredicted RBP18.33■□□□□ 0.53
SNU13-208ENST00000488571 SPATA31D1Q6ZQQ2 1576 aa18.32■□□□□ 0.52
SNU13-208ENST00000488571 DHX29Q7Z478 1369 aaKnown RBP18.31■□□□□ 0.52
SNU13-208ENST00000488571 PKD2Q13563 968 aa18.31■□□□□ 0.52
SNU13-208ENST00000488571 DNMT1P26358 1616 aaKnown RBP18.31■□□□□ 0.52
SNU13-208ENST00000488571 A2ML1A8K2U0 1454 aa18.3■□□□□ 0.52
SNU13-208ENST00000488571 CAMSAP2Q08AD1 1489 aa18.28■□□□□ 0.52
SNU13-208ENST00000488571 NCOA2Q15596 1464 aa18.28■□□□□ 0.52
SNU13-208ENST00000488571 CCDC141Q6ZP82 1450 aa18.28■□□□□ 0.52
SNU13-208ENST00000488571 KDM5DQ9BY66 1539 aa18.26■□□□□ 0.51
SNU13-208ENST00000488571 FAM135AQ9P2D6 1515 aa18.25■□□□□ 0.51
SNU13-208ENST00000488571 POLR1AO95602 1720 aaPredicted RBP18.25■□□□□ 0.51
SNU13-208ENST00000488571 PZPP20742 1482 aa18.25■□□□□ 0.51
SNU13-208ENST00000488571 NEURL4Q96JN8 1562 aa18.25■□□□□ 0.51
SNU13-208ENST00000488571 KIF3BO15066 747 aa18.24■□□□□ 0.51
SNU13-208ENST00000488571 FBXO31Q5XUX0 539 aaPredicted RBP18.24■□□□□ 0.51
SNU13-208ENST00000488571 ARHGEF5Q12774 1597 aa18.23■□□□□ 0.51
SNU13-208ENST00000488571 TNRQ92752 1358 aa18.23■□□□□ 0.51
SNU13-208ENST00000488571 UBAP1LF5GYI3 381 aa18.23■□□□□ 0.51
SNU13-208ENST00000488571 SOCS7O14512 581 aa18.23■□□□□ 0.51
SNU13-208ENST00000488571 U3KPZ7 1027 aaPredicted RBP18.23■□□□□ 0.51
SNU13-208ENST00000488571 RSPH4AQ5TD94 716 aa18.2■□□□□ 0.5
SNU13-208ENST00000488571 WASHC2CQ9Y4E1 1318 aa18.18■□□□□ 0.5
SNU13-208ENST00000488571 RNF17Q9BXT8 1623 aaKnown RBP18.16■□□□□ 0.5
SNU13-208ENST00000488571 MIA2Q96PC5 1412 aa18.16■□□□□ 0.5
SNU13-208ENST00000488571 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.16■□□□□ 0.5
SNU13-208ENST00000488571 LRRC9Q6ZRR7 1453 aa18.15■□□□□ 0.5
SNU13-208ENST00000488571 NLRP1Q9C000 1473 aa18.15■□□□□ 0.5
SNU13-208ENST00000488571 SHANK2Q9UPX8 1470 aa18.15■□□□□ 0.5
SNU13-208ENST00000488571 CPS1P31327 1500 aa18.15■□□□□ 0.5
SNU13-208ENST00000488571 MAST1Q9Y2H9 1570 aa18.15■□□□□ 0.5
SNU13-208ENST00000488571 VWDEQ8N2E2 1590 aa18.14■□□□□ 0.49
SNU13-208ENST00000488571 UGGT1Q9NYU2 1555 aa18.14■□□□□ 0.49
SNU13-208ENST00000488571 DEPDC5O75140 1603 aa18.13■□□□□ 0.49
SNU13-208ENST00000488571 SLC4A2P04920 1241 aa18.13■□□□□ 0.49
SNU13-208ENST00000488571 VPS8Q8N3P4 1428 aa18.13■□□□□ 0.49
SNU13-208ENST00000488571 MED14O60244 1454 aa18.13■□□□□ 0.49
SNU13-208ENST00000488571 ABCC3O15438 1527 aa18.13■□□□□ 0.49
SNU13-208ENST00000488571 ZC3H13Q5T200 1668 aaKnown RBP18.12■□□□□ 0.49
SNU13-208ENST00000488571 TSPY4P0CV99 314 aa18.12■□□□□ 0.49
SNU13-208ENST00000488571 TSPY10P0CW01 314 aa18.12■□□□□ 0.49
SNU13-208ENST00000488571 MROH1Q8NDA8 1641 aa18.12■□□□□ 0.49
SNU13-208ENST00000488571 ANKLE2Q86XL3 938 aa18.11■□□□□ 0.49
SNU13-208ENST00000488571 THEMISQ8N1K5 641 aaPredicted RBP18.11■□□□□ 0.49
SNU13-208ENST00000488571 EIF2AK4Q9P2K8 1649 aaKnown RBP18.11■□□□□ 0.49
SNU13-208ENST00000488571 NPHP4O75161 1426 aaPredicted RBP18.09■□□□□ 0.49
SNU13-208ENST00000488571 ALKQ9UM73 1620 aa18.09■□□□□ 0.49
SNU13-208ENST00000488571 IQGAP1P46940 1657 aa18.08■□□□□ 0.48
SNU13-208ENST00000488571 CEP152O94986 1710 aa18.07■□□□□ 0.48
SNU13-208ENST00000488571 HSPA1LP34931 641 aa18.07■□□□□ 0.48
SNU13-208ENST00000488571 KANK4Q5T7N3 995 aaPredicted RBP18.07■□□□□ 0.48
SNU13-208ENST00000488571 MAP3K1Q13233 1512 aa18.07■□□□□ 0.48
SNU13-208ENST00000488571 ERVK-7P63135 1459 aa18.07■□□□□ 0.48
SNU13-208ENST00000488571 STRCP1A6NGW2 1772 aa18.07■□□□□ 0.48
SNU13-208ENST00000488571 MYOM3Q5VTT5 1437 aa18.06■□□□□ 0.48
SNU13-208ENST00000488571 TOM1O60784 492 aa18.05■□□□□ 0.48
SNU13-208ENST00000488571 PIP4K2BP78356 416 aa18.05■□□□□ 0.48
SNU13-208ENST00000488571 LOC105371045A0A1W2PR82 267 aa18.04■□□□□ 0.48
SNU13-208ENST00000488571 MED1Q15648 1581 aaPredicted RBP18.04■□□□□ 0.48
SNU13-208ENST00000488571 UBR1Q8IWV7 1749 aa18.03■□□□□ 0.48
SNU13-208ENST00000488571 DUOX2Q9NRD8 1548 aa18.03■□□□□ 0.48
SNU13-208ENST00000488571 CFAP65Q6ZU64 1925 aaKnown RBP18.02■□□□□ 0.47
SNU13-208ENST00000488571 CROCC2H7BZ55 1655 aa18■□□□□ 0.47
SNU13-208ENST00000488571 PRDM15P57071 1507 aaPredicted RBP18■□□□□ 0.47
SNU13-208ENST00000488571 LRRC7Q96NW7 1537 aa18■□□□□ 0.47
SNU13-208ENST00000488571 SYNMO15061 1565 aa17.99■□□□□ 0.47
SNU13-208ENST00000488571 ARHGAP31Q2M1Z3 1444 aa17.97■□□□□ 0.47
SNU13-208ENST00000488571 ARHGAP23Q9P227 1491 aa17.96■□□□□ 0.47
SNU13-208ENST00000488571 KIF15Q9NS87 1388 aa17.96■□□□□ 0.47
SNU13-208ENST00000488571 SLIT1O75093 1534 aa17.96■□□□□ 0.47
SNU13-208ENST00000488571 ABCC5O15440 1437 aa17.96■□□□□ 0.47
SNU13-208ENST00000488571 ERBINQ96RT1 1412 aa17.96■□□□□ 0.47
SNU13-208ENST00000488571 SCAF11Q99590 1463 aaKnown RBP17.95■□□□□ 0.46
SNU13-208ENST00000488571 PTPN23Q9H3S7 1636 aa17.95■□□□□ 0.46
SNU13-208ENST00000488571 LTKP29376 864 aa17.94■□□□□ 0.46
SNU13-208ENST00000488571 SPINK5Q9NQ38 1064 aaPredicted RBP17.93■□□□□ 0.46
SNU13-208ENST00000488571 PIK3C2BO00750 1634 aa17.92■□□□□ 0.46
SNU13-208ENST00000488571 XIRP1Q702N8 1843 aaKnown RBP17.92■□□□□ 0.46
SNU13-208ENST00000488571 DAPK1P53355 1430 aa17.91■□□□□ 0.46
SNU13-208ENST00000488571 RRP7BPQ9NSQ0 103 aa17.91■□□□□ 0.46
SNU13-208ENST00000488571 CAPN15O75808 1086 aa17.9■□□□□ 0.46
SNU13-208ENST00000488571 TXNDC2Q86VQ3 553 aa17.89■□□□□ 0.45
SNU13-208ENST00000488571 FGD6Q6ZV73 1430 aa17.88■□□□□ 0.45
SNU13-208ENST00000488571 KDM5AP29375 1690 aaKnown RBP17.87■□□□□ 0.45
SNU13-208ENST00000488571 TMEM2Q9UHN6 1383 aa17.87■□□□□ 0.45
SNU13-208ENST00000488571 LMTK2Q8IWU2 1503 aa17.87■□□□□ 0.45
SNU13-208ENST00000488571 EFCAB6Q5THR3 1501 aa17.84■□□□□ 0.45
SNU13-208ENST00000488571 KANK1Q14678 1352 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms