RNA–Protein interactions for RNA: ENST00000488463.5

COL9A2-208, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 1,005 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-208ENST00000488463 MROH1Q8NDA8 1641 aa22.03■■□□□ 1.12
COL9A2-208ENST00000488463 NPATQ14207 1427 aa22.02■■□□□ 1.12
COL9A2-208ENST00000488463 KIF15Q9NS87 1388 aa22.01■■□□□ 1.11
COL9A2-208ENST00000488463 PTPRKQ15262 1439 aa22.01■■□□□ 1.11
COL9A2-208ENST00000488463 KDM5DQ9BY66 1539 aa22.01■■□□□ 1.11
COL9A2-208ENST00000488463 HSPA2P54652 639 aa22■■□□□ 1.11
COL9A2-208ENST00000488463 PPARGC1BQ86YN6 1023 aaKnown RBP22■■□□□ 1.11
COL9A2-208ENST00000488463 ADGRL2O95490 1459 aa22■■□□□ 1.11
COL9A2-208ENST00000488463 NCOA1Q15788 1441 aa21.99■■□□□ 1.11
COL9A2-208ENST00000488463 FBXO41Q8TF61 875 aa21.99■■□□□ 1.11
COL9A2-208ENST00000488463 UHRF1BP1Q6BDS2 1440 aa21.97■■□□□ 1.11
COL9A2-208ENST00000488463 ERBINQ96RT1 1412 aa21.97■■□□□ 1.11
COL9A2-208ENST00000488463 FAM50AQ14320 339 aaKnown RBP21.97■■□□□ 1.11
COL9A2-208ENST00000488463 RRP7BPQ9NSQ0 103 aa21.97■■□□□ 1.11
COL9A2-208ENST00000488463 CHIC2Q9UKJ5 165 aa21.95■■□□□ 1.1
COL9A2-208ENST00000488463 ABCC3O15438 1527 aa21.95■■□□□ 1.1
COL9A2-208ENST00000488463 DEPDC5O75140 1603 aa21.95■■□□□ 1.1
COL9A2-208ENST00000488463 ANKRD30AQ9BXX3 1397 aa21.94■■□□□ 1.1
COL9A2-208ENST00000488463 PZPP20742 1482 aa21.93■■□□□ 1.1
COL9A2-208ENST00000488463 PRDM15P57071 1507 aaPredicted RBP21.93■■□□□ 1.1
COL9A2-208ENST00000488463 ZC3H13Q5T200 1668 aaKnown RBP21.93■■□□□ 1.1
COL9A2-208ENST00000488463 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.93■■□□□ 1.1
COL9A2-208ENST00000488463 WASHC2CQ9Y4E1 1318 aa21.92■■□□□ 1.1
COL9A2-208ENST00000488463 STRCQ7RTU9 1775 aa21.92■■□□□ 1.1
COL9A2-208ENST00000488463 MYO3AQ8NEV4 1616 aa21.91■■□□□ 1.1
COL9A2-208ENST00000488463 ZNF142P52746 1687 aaPredicted RBP21.91■■□□□ 1.1
COL9A2-208ENST00000488463 CEP152O94986 1710 aa21.9■■□□□ 1.1
COL9A2-208ENST00000488463 RRBP1Q9P2E9 1410 aaKnown RBP21.89■■□□□ 1.09
COL9A2-208ENST00000488463 FBXO31Q5XUX0 539 aaPredicted RBP21.88■■□□□ 1.09
COL9A2-208ENST00000488463 VWDEQ8N2E2 1590 aa21.87■■□□□ 1.09
COL9A2-208ENST00000488463 CAMSAP1Q5T5Y3 1602 aa21.86■■□□□ 1.09
COL9A2-208ENST00000488463 CEP170BQ9Y4F5 1589 aaPredicted RBP21.86■■□□□ 1.09
COL9A2-208ENST00000488463 ROCK1Q13464 1354 aa21.85■■□□□ 1.09
COL9A2-208ENST00000488463 SPATA31D1Q6ZQQ2 1576 aa21.82■■□□□ 1.08
COL9A2-208ENST00000488463 ANKRD50Q9ULJ7 1429 aa21.82■■□□□ 1.08
COL9A2-208ENST00000488463 TNRQ92752 1358 aa21.82■■□□□ 1.08
COL9A2-208ENST00000488463 ARHGAP31Q2M1Z3 1444 aa21.81■■□□□ 1.08
COL9A2-208ENST00000488463 LMTK2Q8IWU2 1503 aa21.81■■□□□ 1.08
COL9A2-208ENST00000488463 A2ML1A8K2U0 1454 aa21.81■■□□□ 1.08
COL9A2-208ENST00000488463 ERVK-7P63135 1459 aa21.79■■□□□ 1.08
COL9A2-208ENST00000488463 CFAP65Q6ZU64 1925 aaKnown RBP21.78■■□□□ 1.08
COL9A2-208ENST00000488463 UNC13BO14795 1591 aa21.76■■□□□ 1.07
COL9A2-208ENST00000488463 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.76■■□□□ 1.071e-6■■□□□ 11.5
COL9A2-208ENST00000488463 PLA2R1Q13018 1463 aa21.76■■□□□ 1.07
COL9A2-208ENST00000488463 NLRP1Q9C000 1473 aa21.76■■□□□ 1.07
COL9A2-208ENST00000488463 CERKQ8TCT0 537 aa21.75■■□□□ 1.07
COL9A2-208ENST00000488463 KANK1Q14678 1352 aa21.74■■□□□ 1.07
COL9A2-208ENST00000488463 PTPRTO14522 1441 aa21.73■■□□□ 1.07
COL9A2-208ENST00000488463 ITGAEP38570 1179 aa21.73■■□□□ 1.07
COL9A2-208ENST00000488463 EFCAB6Q5THR3 1501 aa21.73■■□□□ 1.07
COL9A2-208ENST00000488463 DMRT2Q9Y5R5 561 aa21.69■■□□□ 1.06
COL9A2-208ENST00000488463 NCKAP5LQ9HCH0 1330 aa21.68■■□□□ 1.06
COL9A2-208ENST00000488463 UGGT1Q9NYU2 1555 aa21.68■■□□□ 1.06
COL9A2-208ENST00000488463 TET3O43151 1660 aa21.68■■□□□ 1.06
COL9A2-208ENST00000488463 SYNMO15061 1565 aa21.67■■□□□ 1.06
COL9A2-208ENST00000488463 IQGAP3Q86VI3 1631 aa21.66■■□□□ 1.06
COL9A2-208ENST00000488463 NOS1P29475 1434 aa21.66■■□□□ 1.06
COL9A2-208ENST00000488463 UBR1Q8IWV7 1749 aa21.66■■□□□ 1.06
COL9A2-208ENST00000488463 NEURL4Q96JN8 1562 aa21.65■■□□□ 1.06
COL9A2-208ENST00000488463 GCC2Q8IWJ2 1684 aa21.65■■□□□ 1.06
COL9A2-208ENST00000488463 NAIPQ13075 1403 aa21.64■■□□□ 1.06
COL9A2-208ENST00000488463 POLR1AO95602 1720 aaPredicted RBP21.64■■□□□ 1.06
COL9A2-208ENST00000488463 PKD2Q13563 968 aa21.64■■□□□ 1.05
COL9A2-208ENST00000488463 RPRD2Q5VT52 1461 aaKnown RBP21.63■■□□□ 1.05
COL9A2-208ENST00000488463 THEMISQ8N1K5 641 aaPredicted RBP21.62■■□□□ 1.05
COL9A2-208ENST00000488463 PIK3C2BO00750 1634 aa21.62■■□□□ 1.05
COL9A2-208ENST00000488463 E9PCH4 1651 aa21.61■■□□□ 1.05
COL9A2-208ENST00000488463 LTBP4Q8N2S1 1624 aa21.6■■□□□ 1.05
COL9A2-208ENST00000488463 HFM1A2PYH4 1435 aa21.59■■□□□ 1.05
COL9A2-208ENST00000488463 KDM5AP29375 1690 aaKnown RBP21.59■■□□□ 1.05
COL9A2-208ENST00000488463 MED14O60244 1454 aa21.58■■□□□ 1.05
COL9A2-208ENST00000488463 NUP155O75694 1391 aa21.58■■□□□ 1.04
COL9A2-208ENST00000488463 ARHGAP23Q9P227 1491 aa21.58■■□□□ 1.04
COL9A2-208ENST00000488463 SLIT1O75093 1534 aa21.56■■□□□ 1.04
COL9A2-208ENST00000488463 IDI1Q13907 227 aa21.56■■□□□ 1.04
COL9A2-208ENST00000488463 ANKLE2Q86XL3 938 aa21.54■■□□□ 1.04
COL9A2-208ENST00000488463 ADGRB3O60242 1522 aa21.51■■□□□ 1.03
COL9A2-208ENST00000488463 SLC52A1Q9NWF4 448 aa21.51■■□□□ 1.03
COL9A2-208ENST00000488463 NPHP4O75161 1426 aaPredicted RBP21.5■■□□□ 1.03
COL9A2-208ENST00000488463 LTKP29376 864 aa21.5■■□□□ 1.03
COL9A2-208ENST00000488463 ZNF335Q9H4Z2 1342 aaPredicted RBP21.5■■□□□ 1.03
COL9A2-208ENST00000488463 IQGAP1P46940 1657 aa21.5■■□□□ 1.03
COL9A2-208ENST00000488463 TMEM2Q9UHN6 1383 aa21.49■■□□□ 1.03
COL9A2-208ENST00000488463 MYO5BQ9ULV0 1848 aa21.48■■□□□ 1.03
COL9A2-208ENST00000488463 SCAF11Q99590 1463 aaKnown RBP21.48■■□□□ 1.03
COL9A2-208ENST00000488463 TMEM131LA2VDJ0 1609 aa21.47■■□□□ 1.03
COL9A2-208ENST00000488463 SPHKAPQ2M3C7 1700 aa21.44■■□□□ 1.02
COL9A2-208ENST00000488463 ZFYVE9O95405 1425 aa21.42■■□□□ 1.02
COL9A2-208ENST00000488463 TXNDC2Q86VQ3 553 aa21.42■■□□□ 1.02
COL9A2-208ENST00000488463 IQSEC2Q5JU85 1478 aa21.41■■□□□ 1.02
COL9A2-208ENST00000488463 STRCP1A6NGW2 1772 aa21.41■■□□□ 1.02
COL9A2-208ENST00000488463 STAG3Q9UJ98 1225 aa21.4■■□□□ 1.02
COL9A2-208ENST00000488463 EID1Q9Y6B2 187 aa21.37■■□□□ 1.01
COL9A2-208ENST00000488463 TRPM2O94759 1503 aa21.37■■□□□ 1.01
COL9A2-208ENST00000488463 CLTCL1P53675 1640 aa21.36■■□□□ 1.01
COL9A2-208ENST00000488463 CPS1P31327 1500 aa21.35■■□□□ 1.01
COL9A2-208ENST00000488463 TRIM52Q96A61 297 aa21.34■■□□□ 1.01
COL9A2-208ENST00000488463 RIMS2Q9UQ26 1411 aa21.34■■□□□ 1.01
COL9A2-208ENST00000488463 SETD5Q9C0A6 1442 aa21.33■■□□□ 1.01
COL9A2-208ENST00000488463 SLC4A1APQ9BWU0 796 aaKnown RBP21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms