RNA–Protein interactions for RNA: ENST00000488452.5

NELFA-215, Transcript of negative elongation factor complex member A, humanhuman

TSL 4

Gene NELFA, Length 560 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFA-215ENST00000488452 DISP3Q9P2K9 1392 aa24.14■■□□□ 1.45
NELFA-215ENST00000488452 WASHC2CQ9Y4E1 1318 aa24.13■■□□□ 1.45
NELFA-215ENST00000488452 FBXO31Q5XUX0 539 aaPredicted RBP24.13■■□□□ 1.45
NELFA-215ENST00000488452 LOC105371045A0A1W2PR82 267 aa24.1■■□□□ 1.45
NELFA-215ENST00000488452 TNRQ92752 1358 aa24.1■■□□□ 1.45
NELFA-215ENST00000488452 ARHGEF5Q12774 1597 aa24.1■■□□□ 1.45
NELFA-215ENST00000488452 DNMT1P26358 1616 aaKnown RBP24.1■■□□□ 1.45
NELFA-215ENST00000488452 FAM135AQ9P2D6 1515 aa24.1■■□□□ 1.45
NELFA-215ENST00000488452 KDM5DQ9BY66 1539 aa24.09■■□□□ 1.45
NELFA-215ENST00000488452 PZPP20742 1482 aa24.08■■□□□ 1.45
NELFA-215ENST00000488452 LRRC9Q6ZRR7 1453 aa24.08■■□□□ 1.45
NELFA-215ENST00000488452 VPS8Q8N3P4 1428 aa24.08■■□□□ 1.44
NELFA-215ENST00000488452 UBAP1LF5GYI3 381 aa24.07■■□□□ 1.44
NELFA-215ENST00000488452 ILDR2Q71H61 639 aa24.04■■□□□ 1.44
NELFA-215ENST00000488452 MIA2Q96PC5 1412 aa24.03■■□□□ 1.44
NELFA-215ENST00000488452 THEMISQ8N1K5 641 aaPredicted RBP24.03■■□□□ 1.44
NELFA-215ENST00000488452 KANK4Q5T7N3 995 aaPredicted RBP24.02■■□□□ 1.44
NELFA-215ENST00000488452 ANKLE2Q86XL3 938 aa24.01■■□□□ 1.43
NELFA-215ENST00000488452 MAP3K1Q13233 1512 aa23.99■■□□□ 1.43
NELFA-215ENST00000488452 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.98■■□□□ 1.43
NELFA-215ENST00000488452 NLRP1Q9C000 1473 aa23.98■■□□□ 1.43
NELFA-215ENST00000488452 MAST1Q9Y2H9 1570 aa23.98■■□□□ 1.43
NELFA-215ENST00000488452 POLR1AO95602 1720 aaPredicted RBP23.96■■□□□ 1.43
NELFA-215ENST00000488452 SPATA31D1Q6ZQQ2 1576 aa23.95■■□□□ 1.43
NELFA-215ENST00000488452 NEURL4Q96JN8 1562 aa23.95■■□□□ 1.43
NELFA-215ENST00000488452 MYOM3Q5VTT5 1437 aa23.94■■□□□ 1.42
NELFA-215ENST00000488452 RNF17Q9BXT8 1623 aaKnown RBP23.94■■□□□ 1.42
NELFA-215ENST00000488452 UGGT1Q9NYU2 1555 aa23.94■■□□□ 1.42
NELFA-215ENST00000488452 SOCS7O14512 581 aa23.93■■□□□ 1.42
NELFA-215ENST00000488452 SHANK2Q9UPX8 1470 aa23.93■■□□□ 1.42
NELFA-215ENST00000488452 ABCC3O15438 1527 aa23.92■■□□□ 1.42
NELFA-215ENST00000488452 CPS1P31327 1500 aa23.92■■□□□ 1.42
NELFA-215ENST00000488452 EIF2AK4Q9P2K8 1649 aaKnown RBP23.9■■□□□ 1.42
NELFA-215ENST00000488452 ZC3H13Q5T200 1668 aaKnown RBP23.89■■□□□ 1.42
NELFA-215ENST00000488452 MED14O60244 1454 aa23.89■■□□□ 1.42
NELFA-215ENST00000488452 TOM1O60784 492 aa23.89■■□□□ 1.41
NELFA-215ENST00000488452 NPHP4O75161 1426 aaPredicted RBP23.89■■□□□ 1.41
NELFA-215ENST00000488452 DEPDC5O75140 1603 aa23.87■■□□□ 1.41
NELFA-215ENST00000488452 DUOX2Q9NRD8 1548 aa23.86■■□□□ 1.41
NELFA-215ENST00000488452 SCAF1Q9H7N4 1312 aaKnown RBP23.85■■□□□ 1.41
NELFA-215ENST00000488452 PIP4K2BP78356 416 aa23.85■■□□□ 1.41
NELFA-215ENST00000488452 APLP2Q06481 763 aa23.85■■□□□ 1.41
NELFA-215ENST00000488452 ERVK-7P63135 1459 aa23.85■■□□□ 1.41
NELFA-215ENST00000488452 VWDEQ8N2E2 1590 aa23.85■■□□□ 1.41
NELFA-215ENST00000488452 MROH1Q8NDA8 1641 aa23.84■■□□□ 1.41
NELFA-215ENST00000488452 HSPA1LP34931 641 aa23.82■■□□□ 1.4
NELFA-215ENST00000488452 RRP7BPQ9NSQ0 103 aa23.82■■□□□ 1.4
NELFA-215ENST00000488452 KIF15Q9NS87 1388 aa23.81■■□□□ 1.4
NELFA-215ENST00000488452 ABCC5O15440 1437 aa23.81■■□□□ 1.4
NELFA-215ENST00000488452 CEP152O94986 1710 aa23.8■■□□□ 1.4
NELFA-215ENST00000488452 IQGAP1P46940 1657 aa23.79■■□□□ 1.4
NELFA-215ENST00000488452 CFAP65Q6ZU64 1925 aaKnown RBP23.78■■□□□ 1.4
NELFA-215ENST00000488452 ERBINQ96RT1 1412 aa23.77■■□□□ 1.4
NELFA-215ENST00000488452 PTPN23Q9H3S7 1636 aa23.77■■□□□ 1.4
NELFA-215ENST00000488452 ARHGAP31Q2M1Z3 1444 aa23.76■■□□□ 1.39
NELFA-215ENST00000488452 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.76■■□□□ 1.39
NELFA-215ENST00000488452 UBR1Q8IWV7 1749 aa23.74■■□□□ 1.39
NELFA-215ENST00000488452 DAPK1P53355 1430 aa23.74■■□□□ 1.39
NELFA-215ENST00000488452 PRDM15P57071 1507 aaPredicted RBP23.74■■□□□ 1.39
NELFA-215ENST00000488452 CROCC2H7BZ55 1655 aa23.73■■□□□ 1.39
NELFA-215ENST00000488452 TXNDC2Q86VQ3 553 aa23.73■■□□□ 1.39
NELFA-215ENST00000488452 LTKP29376 864 aa23.72■■□□□ 1.39
NELFA-215ENST00000488452 LRRC7Q96NW7 1537 aa23.71■■□□□ 1.39
NELFA-215ENST00000488452 SCAF11Q99590 1463 aaKnown RBP23.71■■□□□ 1.39
NELFA-215ENST00000488452 FGD6Q6ZV73 1430 aa23.71■■□□□ 1.39
NELFA-215ENST00000488452 KANK1Q14678 1352 aa23.71■■□□□ 1.39
NELFA-215ENST00000488452 CHIC2Q9UKJ5 165 aa23.7■■□□□ 1.38
NELFA-215ENST00000488452 STRCP1A6NGW2 1772 aa23.7■■□□□ 1.38
NELFA-215ENST00000488452 ARHGAP23Q9P227 1491 aa23.69■■□□□ 1.38
NELFA-215ENST00000488452 EID1Q9Y6B2 187 aa23.69■■□□□ 1.38
NELFA-215ENST00000488452 SLIT1O75093 1534 aa23.69■■□□□ 1.38
NELFA-215ENST00000488452 ANKRD30AQ9BXX3 1397 aa23.68■■□□□ 1.38
NELFA-215ENST00000488452 ALKQ9UM73 1620 aa23.68■■□□□ 1.38
NELFA-215ENST00000488452 STAG3Q9UJ98 1225 aa23.66■■□□□ 1.38
NELFA-215ENST00000488452 SYNMO15061 1565 aa23.64■■□□□ 1.37
NELFA-215ENST00000488452 IDI1Q13907 227 aa23.63■■□□□ 1.37
NELFA-215ENST00000488452 MED1Q15648 1581 aaPredicted RBP23.63■■□□□ 1.37
NELFA-215ENST00000488452 TMEM2Q9UHN6 1383 aa23.63■■□□□ 1.37
NELFA-215ENST00000488452 LMTK2Q8IWU2 1503 aa23.62■■□□□ 1.37
NELFA-215ENST00000488452 PIK3C2BO00750 1634 aa23.62■■□□□ 1.37
NELFA-215ENST00000488452 SENP3Q9H4L4 574 aaPredicted RBP23.58■■□□□ 1.37
NELFA-215ENST00000488452 EFCAB6Q5THR3 1501 aa23.56■■□□□ 1.36
NELFA-215ENST00000488452 FAM50AQ14320 339 aaKnown RBP23.56■■□□□ 1.36
NELFA-215ENST00000488452 KDM5AP29375 1690 aaKnown RBP23.55■■□□□ 1.36
NELFA-215ENST00000488452 PHF23Q9BUL5 403 aaPredicted RBP23.55■■□□□ 1.36
NELFA-215ENST00000488452 ADGRL2O95490 1459 aa23.55■■□□□ 1.36
NELFA-215ENST00000488452 NOS1P29475 1434 aa23.54■■□□□ 1.36
NELFA-215ENST00000488452 SLC52A1Q9NWF4 448 aa23.54■■□□□ 1.36
NELFA-215ENST00000488452 KCNA6P17658 529 aa23.52■■□□□ 1.36
NELFA-215ENST00000488452 SLC26A8Q96RN1 970 aa23.5■■□□□ 1.35
NELFA-215ENST00000488452 ANKRD50Q9ULJ7 1429 aa23.5■■□□□ 1.35
NELFA-215ENST00000488452 XIRP1Q702N8 1843 aaKnown RBP23.49■■□□□ 1.35
NELFA-215ENST00000488452 TET3O43151 1660 aa23.48■■□□□ 1.35
NELFA-215ENST00000488452 TMEM94Q12767 1356 aa23.48■■□□□ 1.35
NELFA-215ENST00000488452 PROSER2Q86WR7 435 aaPredicted RBP23.47■■□□□ 1.35
NELFA-215ENST00000488452 ADGRB3O60242 1522 aa23.47■■□□□ 1.35
NELFA-215ENST00000488452 RPRD2Q5VT52 1461 aaKnown RBP23.46■■□□□ 1.35
NELFA-215ENST00000488452 BCANQ96GW7 911 aa23.46■■□□□ 1.35
NELFA-215ENST00000488452 FAM135BQ49AJ0 1406 aa23.45■■□□□ 1.34
NELFA-215ENST00000488452 HDGFP51858 240 aaKnown RBP23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms