RNA–Protein interactions for RNA: ENST00000488325.5

HLA-DOB-209, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 1,188 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-209ENST00000488325 LRRIQ1Q96JM4 1722 aa18.45■□□□□ 0.54
HLA-DOB-209ENST00000488325 SPAG9O60271 1321 aaKnown RBP18.45■□□□□ 0.54
HLA-DOB-209ENST00000488325 RNF17Q9BXT8 1623 aaKnown RBP18.44■□□□□ 0.54
HLA-DOB-209ENST00000488325 ANKLE2Q86XL3 938 aa18.43■□□□□ 0.54
HLA-DOB-209ENST00000488325 LRRC7Q96NW7 1537 aa18.43■□□□□ 0.54
HLA-DOB-209ENST00000488325 A2MP01023 1474 aa18.42■□□□□ 0.54
HLA-DOB-209ENST00000488325 NPHP4O75161 1426 aaPredicted RBP18.41■□□□□ 0.54
HLA-DOB-209ENST00000488325 LRRC9Q6ZRR7 1453 aa18.41■□□□□ 0.54
HLA-DOB-209ENST00000488325 SETD1AO15047 1707 aaKnown RBP18.41■□□□□ 0.54
HLA-DOB-209ENST00000488325 KANK4Q5T7N3 995 aaPredicted RBP18.41■□□□□ 0.54
HLA-DOB-209ENST00000488325 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.41■□□□□ 0.54
HLA-DOB-209ENST00000488325 ATP7AQ04656 1500 aa18.4■□□□□ 0.54
HLA-DOB-209ENST00000488325 TNRQ92752 1358 aa18.4■□□□□ 0.54
HLA-DOB-209ENST00000488325 STRCP1A6NGW2 1772 aa18.39■□□□□ 0.53
HLA-DOB-209ENST00000488325 MED14O60244 1454 aa18.39■□□□□ 0.53
HLA-DOB-209ENST00000488325 SYCP2Q9BX26 1530 aa18.39■□□□□ 0.53
HLA-DOB-209ENST00000488325 ZNF777Q9ULD5 760 aaPredicted RBP18.37■□□□□ 0.53
HLA-DOB-209ENST00000488325 SYNMO15061 1565 aa18.37■□□□□ 0.53
HLA-DOB-209ENST00000488325 CDC42BPAQ5VT25 1732 aa18.37■□□□□ 0.53
HLA-DOB-209ENST00000488325 DEPDC5O75140 1603 aa18.36■□□□□ 0.53
HLA-DOB-209ENST00000488325 FBXO31Q5XUX0 539 aaPredicted RBP18.36■□□□□ 0.53
HLA-DOB-209ENST00000488325 INO80Q9ULG1 1556 aaPredicted RBP18.36■□□□□ 0.53
HLA-DOB-209ENST00000488325 MTUS2Q5JR59 1369 aa18.35■□□□□ 0.53
HLA-DOB-209ENST00000488325 HNRNPMP52272 730 aaKnown RBP eCLIP18.35■□□□□ 0.53
HLA-DOB-209ENST00000488325 THEMISQ8N1K5 641 aaPredicted RBP18.35■□□□□ 0.53
HLA-DOB-209ENST00000488325 IQGAP1P46940 1657 aa18.34■□□□□ 0.53
HLA-DOB-209ENST00000488325 EHBP1L1Q8N3D4 1523 aa18.33■□□□□ 0.53
HLA-DOB-209ENST00000488325 UGGT1Q9NYU2 1555 aa18.3■□□□□ 0.52
HLA-DOB-209ENST00000488325 FAM135AQ9P2D6 1515 aa18.3■□□□□ 0.52
HLA-DOB-209ENST00000488325 PZPP20742 1482 aa18.3■□□□□ 0.52
HLA-DOB-209ENST00000488325 UPF1Q92900 1129 aaKnown RBP eCLIP18.29■□□□□ 0.52
HLA-DOB-209ENST00000488325 NLRP1Q9C000 1473 aa18.28■□□□□ 0.52
HLA-DOB-209ENST00000488325 ADGBQ8N7X0 1667 aa18.28■□□□□ 0.52
HLA-DOB-209ENST00000488325 FAM135BQ49AJ0 1406 aa18.27■□□□□ 0.52
HLA-DOB-209ENST00000488325 KIAA1107Q9UPP5 1409 aa18.27■□□□□ 0.52
HLA-DOB-209ENST00000488325 SRCAPQ6ZRS2 3230 aa18.27■□□□□ 0.51
HLA-DOB-209ENST00000488325 MIA2Q96PC5 1412 aa18.26■□□□□ 0.51
HLA-DOB-209ENST00000488325 GPATCH8Q9UKJ3 1502 aaKnown RBP18.25■□□□□ 0.51
HLA-DOB-209ENST00000488325 RRBP1Q9P2E9 1410 aaKnown RBP18.24■□□□□ 0.51
HLA-DOB-209ENST00000488325 PLEKHH2Q8IVE3 1493 aa18.24■□□□□ 0.51
HLA-DOB-209ENST00000488325 KDM5DQ9BY66 1539 aa18.23■□□□□ 0.51
HLA-DOB-209ENST00000488325 XIRP1Q702N8 1843 aaKnown RBP18.21■□□□□ 0.51
HLA-DOB-209ENST00000488325 ZC3H13Q5T200 1668 aaKnown RBP18.21■□□□□ 0.51
HLA-DOB-209ENST00000488325 NCOA2Q15596 1464 aa18.2■□□□□ 0.5
HLA-DOB-209ENST00000488325 CCNB3Q8WWL7 1395 aa18.2■□□□□ 0.5
HLA-DOB-209ENST00000488325 DHX29Q7Z478 1369 aaKnown RBP18.19■□□□□ 0.5
HLA-DOB-209ENST00000488325 CFDP1Q9UEE9 299 aaPredicted RBP18.19■□□□□ 0.5
HLA-DOB-209ENST00000488325 WASHC2CQ9Y4E1 1318 aa18.19■□□□□ 0.5
HLA-DOB-209ENST00000488325 KIF3BO15066 747 aa18.18■□□□□ 0.5
HLA-DOB-209ENST00000488325 ROBO1Q9Y6N7 1651 aa18.16■□□□□ 0.5
HLA-DOB-209ENST00000488325 TRIM52Q96A61 297 aa18.16■□□□□ 0.5
HLA-DOB-209ENST00000488325 MYOM3Q5VTT5 1437 aa18.15■□□□□ 0.5
HLA-DOB-209ENST00000488325 RTEL1-TNFRSF6BF6WH68 1400 aa18.13■□□□□ 0.49
HLA-DOB-209ENST00000488325 SCAF11Q99590 1463 aaKnown RBP18.13■□□□□ 0.49
HLA-DOB-209ENST00000488325 FGD6Q6ZV73 1430 aa18.12■□□□□ 0.49
HLA-DOB-209ENST00000488325 JCADQ9P266 1359 aa18.11■□□□□ 0.49
HLA-DOB-209ENST00000488325 TMEM94Q12767 1356 aa18.1■□□□□ 0.49
HLA-DOB-209ENST00000488325 MBD5Q9P267 1494 aa18.09■□□□□ 0.49
HLA-DOB-209ENST00000488325 ZNF644Q9H582 1327 aaPredicted RBP18.09■□□□□ 0.49
HLA-DOB-209ENST00000488325 LTKP29376 864 aa18.08■□□□□ 0.48
HLA-DOB-209ENST00000488325 ZNF772Q68DY9 489 aaPredicted RBP18.08■□□□□ 0.48
HLA-DOB-209ENST00000488325 FAM50AQ14320 339 aaKnown RBP18.07■□□□□ 0.48
HLA-DOB-209ENST00000488325 PHLPP1O60346 1717 aa18.06■□□□□ 0.48
HLA-DOB-209ENST00000488325 TXNDC2Q86VQ3 553 aa18.06■□□□□ 0.48
HLA-DOB-209ENST00000488325 UBR1Q8IWV7 1749 aa18.06■□□□□ 0.48
HLA-DOB-209ENST00000488325 LRP6O75581 1613 aa18.05■□□□□ 0.48
HLA-DOB-209ENST00000488325 ERVK-7P63135 1459 aa18.05■□□□□ 0.48
HLA-DOB-209ENST00000488325 ARHGAP23Q9P227 1491 aa18.04■□□□□ 0.48
HLA-DOB-209ENST00000488325 PTPN23Q9H3S7 1636 aa18.04■□□□□ 0.48
HLA-DOB-209ENST00000488325 MEX3CQ5U5Q3 659 aaKnown RBP18.03■□□□□ 0.48
HLA-DOB-209ENST00000488325 RBM33Q96EV2 1170 aaKnown RBP18.03■□□□□ 0.48
HLA-DOB-209ENST00000488325 SLIT1O75093 1534 aa18.03■□□□□ 0.48
HLA-DOB-209ENST00000488325 RXRBP28702 533 aa18.02■□□□□ 0.48
HLA-DOB-209ENST00000488325 PROSER2Q86WR7 435 aaPredicted RBP18.01■□□□□ 0.47
HLA-DOB-209ENST00000488325 CDK12Q9NYV4 1490 aaPredicted RBP18.01■□□□□ 0.47
HLA-DOB-209ENST00000488325 SPATA31A6Q5VVP1 1343 aa18■□□□□ 0.47
HLA-DOB-209ENST00000488325 ABCC3O15438 1527 aa18■□□□□ 0.47
HLA-DOB-209ENST00000488325 COL16A1Q07092 1604 aaPredicted RBP17.99■□□□□ 0.47
HLA-DOB-209ENST00000488325 KCNA6P17658 529 aa17.99■□□□□ 0.47
HLA-DOB-209ENST00000488325 EID1Q9Y6B2 187 aa17.99■□□□□ 0.47
HLA-DOB-209ENST00000488325 SLAIN2Q9P270 581 aa17.98■□□□□ 0.47
HLA-DOB-209ENST00000488325 CCDC141Q6ZP82 1450 aa17.97■□□□□ 0.47
HLA-DOB-209ENST00000488325 ITGAEP38570 1179 aa17.97■□□□□ 0.47
HLA-DOB-209ENST00000488325 MSH6P52701 1360 aa17.96■□□□□ 0.47
HLA-DOB-209ENST00000488325 PRDM15P57071 1507 aaPredicted RBP17.96■□□□□ 0.47
HLA-DOB-209ENST00000488325 NKTRP30414 1462 aaKnown RBP17.92■□□□□ 0.46
HLA-DOB-209ENST00000488325 CFAP65Q6ZU64 1925 aaKnown RBP17.92■□□□□ 0.46
HLA-DOB-209ENST00000488325 TMEM2Q9UHN6 1383 aa17.91■□□□□ 0.46
HLA-DOB-209ENST00000488325 SLC26A8Q96RN1 970 aa17.91■□□□□ 0.46
HLA-DOB-209ENST00000488325 CAMSAP2Q08AD1 1489 aa17.9■□□□□ 0.46
HLA-DOB-209ENST00000488325 NWD1Q149M9 1564 aa17.89■□□□□ 0.45
HLA-DOB-209ENST00000488325 SHPRHQ149N8 1683 aa17.89■□□□□ 0.45
HLA-DOB-209ENST00000488325 RGS12O14924 1447 aa17.89■□□□□ 0.45
HLA-DOB-209ENST00000488325 TET3O43151 1660 aa17.87■□□□□ 0.45
HLA-DOB-209ENST00000488325 CEP152O94986 1710 aa17.87■□□□□ 0.45
HLA-DOB-209ENST00000488325 RSPH4AQ5TD94 716 aa17.87■□□□□ 0.45
HLA-DOB-209ENST00000488325 ZRANB1Q9UGI0 708 aa17.87■□□□□ 0.45
HLA-DOB-209ENST00000488325 AFF2P51816 1311 aa17.87■□□□□ 0.45
HLA-DOB-209ENST00000488325 SETD5Q9C0A6 1442 aa17.87■□□□□ 0.45
HLA-DOB-209ENST00000488325 MROH1Q8NDA8 1641 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms