RNA–Protein interactions for RNA: ENST00000488025.1

CPA4-207, Transcript of carboxypeptidase A4, humanhuman

TSL 4

Gene CPA4, Length 551 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPA4-207ENST00000488025 A2MP01023 1474 aa13.85□□□□□ -0.19
CPA4-207ENST00000488025 SPAG9O60271 1321 aaKnown RBP13.84□□□□□ -0.19
CPA4-207ENST00000488025 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.83□□□□□ -0.19
CPA4-207ENST00000488025 SYNMO15061 1565 aa13.83□□□□□ -0.19
CPA4-207ENST00000488025 ZC3H13Q5T200 1668 aaKnown RBP13.83□□□□□ -0.2
CPA4-207ENST00000488025 FBXO31Q5XUX0 539 aaPredicted RBP13.83□□□□□ -0.2
CPA4-207ENST00000488025 LRRC7Q96NW7 1537 aa13.83□□□□□ -0.2
CPA4-207ENST00000488025 DEPDC5O75140 1603 aa13.82□□□□□ -0.2
CPA4-207ENST00000488025 TNRQ92752 1358 aa13.8□□□□□ -0.2
CPA4-207ENST00000488025 NPHP4O75161 1426 aaPredicted RBP13.8□□□□□ -0.2
CPA4-207ENST00000488025 EEA1Q15075 1411 aa13.78□□□□□ -0.2
CPA4-207ENST00000488025 UGGT1Q9NYU2 1555 aa13.78□□□□□ -0.2
CPA4-207ENST00000488025 ROBO1Q9Y6N7 1651 aa13.76□□□□□ -0.21
CPA4-207ENST00000488025 GPATCH8Q9UKJ3 1502 aaKnown RBP13.76□□□□□ -0.21
CPA4-207ENST00000488025 MED14O60244 1454 aa13.76□□□□□ -0.21
CPA4-207ENST00000488025 UBTFP17480 764 aaKnown RBP13.76□□□□□ -0.21
CPA4-207ENST00000488025 ANKLE2Q86XL3 938 aa13.76□□□□□ -0.21
CPA4-207ENST00000488025 UBR1Q8IWV7 1749 aa13.74□□□□□ -0.21
CPA4-207ENST00000488025 PZPP20742 1482 aa13.74□□□□□ -0.21
CPA4-207ENST00000488025 CCDC18Q5T9S5 1454 aa13.74□□□□□ -0.21
CPA4-207ENST00000488025 KDM5DQ9BY66 1539 aa13.73□□□□□ -0.21
CPA4-207ENST00000488025 PHLPP1O60346 1717 aa13.73□□□□□ -0.21
CPA4-207ENST00000488025 CEP152O94986 1710 aa13.73□□□□□ -0.21
CPA4-207ENST00000488025 FAM135AQ9P2D6 1515 aa13.71□□□□□ -0.21
CPA4-207ENST00000488025 THEMISQ8N1K5 641 aaPredicted RBP13.69□□□□□ -0.22
CPA4-207ENST00000488025 CASKIN1Q8WXD9 1431 aa13.69□□□□□ -0.22
CPA4-207ENST00000488025 NLRP1Q9C000 1473 aa13.68□□□□□ -0.22
CPA4-207ENST00000488025 ZNF644Q9H582 1327 aaPredicted RBP13.68□□□□□ -0.22
CPA4-207ENST00000488025 MIA2Q96PC5 1412 aa13.68□□□□□ -0.22
CPA4-207ENST00000488025 KIF3BO15066 747 aa13.67□□□□□ -0.22
CPA4-207ENST00000488025 PLEKHH2Q8IVE3 1493 aa13.67□□□□□ -0.22
CPA4-207ENST00000488025 KIAA1107Q9UPP5 1409 aa13.66□□□□□ -0.22
CPA4-207ENST00000488025 CFDP1Q9UEE9 299 aaPredicted RBP13.66□□□□□ -0.22
CPA4-207ENST00000488025 TIAM1Q13009 1591 aa13.66□□□□□ -0.22
CPA4-207ENST00000488025 DHX29Q7Z478 1369 aaKnown RBP13.64□□□□□ -0.23
CPA4-207ENST00000488025 UPF1Q92900 1129 aaKnown RBP eCLIP13.64□□□□□ -0.23
CPA4-207ENST00000488025 WASHC2CQ9Y4E1 1318 aa13.64□□□□□ -0.23
CPA4-207ENST00000488025 CCNB3Q8WWL7 1395 aa13.63□□□□□ -0.23
CPA4-207ENST00000488025 FYCO1Q9BQS8 1478 aa13.62□□□□□ -0.23
CPA4-207ENST00000488025 MBD5Q9P267 1494 aa13.62□□□□□ -0.23
CPA4-207ENST00000488025 TRIM52Q96A61 297 aa13.62□□□□□ -0.23
CPA4-207ENST00000488025 RBM33Q96EV2 1170 aaKnown RBP13.62□□□□□ -0.23
CPA4-207ENST00000488025 FAM135BQ49AJ0 1406 aa13.61□□□□□ -0.23
CPA4-207ENST00000488025 SCAF11Q99590 1463 aaKnown RBP13.6□□□□□ -0.23
CPA4-207ENST00000488025 MAP3K1Q13233 1512 aa13.59□□□□□ -0.23
CPA4-207ENST00000488025 PIK3C2BO00750 1634 aa13.59□□□□□ -0.23
CPA4-207ENST00000488025 NCOA2Q15596 1464 aa13.59□□□□□ -0.23
CPA4-207ENST00000488025 ABCC3O15438 1527 aa13.59□□□□□ -0.23
CPA4-207ENST00000488025 RTEL1-TNFRSF6BF6WH68 1400 aa13.58□□□□□ -0.24
CPA4-207ENST00000488025 LRP6O75581 1613 aa13.58□□□□□ -0.24
CPA4-207ENST00000488025 COL16A1Q07092 1604 aaPredicted RBP13.58□□□□□ -0.24
CPA4-207ENST00000488025 MYO5BQ9ULV0 1848 aa13.58□□□□□ -0.24
CPA4-207ENST00000488025 SRCAPQ6ZRS2 3230 aa13.58□□□□□ -0.24
CPA4-207ENST00000488025 LTKP29376 864 aa13.58□□□□□ -0.24
CPA4-207ENST00000488025 FOXD1Q16676 465 aa13.58□□□□□ -0.24
CPA4-207ENST00000488025 ERVK-7P63135 1459 aa13.58□□□□□ -0.24
CPA4-207ENST00000488025 MROH1Q8NDA8 1641 aa13.56□□□□□ -0.24
CPA4-207ENST00000488025 TMEM94Q12767 1356 aa13.56□□□□□ -0.24
CPA4-207ENST00000488025 ARHGAP23Q9P227 1491 aa13.55□□□□□ -0.24
CPA4-207ENST00000488025 CCDC141Q6ZP82 1450 aa13.54□□□□□ -0.24
CPA4-207ENST00000488025 SLIT1O75093 1534 aa13.54□□□□□ -0.24
CPA4-207ENST00000488025 SHPRHQ149N8 1683 aa13.53□□□□□ -0.24
CPA4-207ENST00000488025 CHD2O14647 1828 aaKnown RBP13.53□□□□□ -0.24
CPA4-207ENST00000488025 TXNDC2Q86VQ3 553 aa13.53□□□□□ -0.24
CPA4-207ENST00000488025 MTUS2Q5JR59 1369 aa13.53□□□□□ -0.24
CPA4-207ENST00000488025 CAMSAP2Q08AD1 1489 aa13.53□□□□□ -0.24
CPA4-207ENST00000488025 KDM5AP29375 1690 aaKnown RBP13.51□□□□□ -0.25
CPA4-207ENST00000488025 JCADQ9P266 1359 aa13.51□□□□□ -0.25
CPA4-207ENST00000488025 EIF2AK4Q9P2K8 1649 aaKnown RBP13.5□□□□□ -0.25
CPA4-207ENST00000488025 LRRC9Q6ZRR7 1453 aa13.5□□□□□ -0.25
CPA4-207ENST00000488025 MEX3CQ5U5Q3 659 aaKnown RBP13.5□□□□□ -0.25
CPA4-207ENST00000488025 PROSER2Q86WR7 435 aaPredicted RBP13.5□□□□□ -0.25
CPA4-207ENST00000488025 EHBP1L1Q8N3D4 1523 aa13.49□□□□□ -0.25
CPA4-207ENST00000488025 NWD1Q149M9 1564 aa13.49□□□□□ -0.25
CPA4-207ENST00000488025 PRDM15P57071 1507 aaPredicted RBP13.48□□□□□ -0.25
CPA4-207ENST00000488025 TET3O43151 1660 aa13.47□□□□□ -0.25
CPA4-207ENST00000488025 ARHGEF5Q12774 1597 aa13.47□□□□□ -0.25
CPA4-207ENST00000488025 SLC26A8Q96RN1 970 aa13.47□□□□□ -0.25
CPA4-207ENST00000488025 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.47□□□□□ -0.25
CPA4-207ENST00000488025 KCNA6P17658 529 aa13.44□□□□□ -0.26
CPA4-207ENST00000488025 RXRBP28702 533 aa13.44□□□□□ -0.26
CPA4-207ENST00000488025 ZNF772Q68DY9 489 aaPredicted RBP13.44□□□□□ -0.26
CPA4-207ENST00000488025 SLAIN2Q9P270 581 aa13.44□□□□□ -0.26
CPA4-207ENST00000488025 EID1Q9Y6B2 187 aa13.44□□□□□ -0.26
CPA4-207ENST00000488025 SETBP1Q9Y6X0 1596 aa13.44□□□□□ -0.26
CPA4-207ENST00000488025 MSH6P52701 1360 aa13.44□□□□□ -0.26
CPA4-207ENST00000488025 NKTRP30414 1462 aaKnown RBP13.42□□□□□ -0.26
CPA4-207ENST00000488025 DIP2AQ14689 1571 aa13.42□□□□□ -0.26
CPA4-207ENST00000488025 MAST1Q9Y2H9 1570 aa13.42□□□□□ -0.26
CPA4-207ENST00000488025 NUTM2BA6NNL0 878 aaPredicted RBP13.42□□□□□ -0.26
CPA4-207ENST00000488025 NUTM2EB1AL46 878 aaPredicted RBP13.42□□□□□ -0.26
CPA4-207ENST00000488025 NUTM2AQ8IVF1 878 aaPredicted RBP13.42□□□□□ -0.26
CPA4-207ENST00000488025 EFCAB6Q5THR3 1501 aa13.42□□□□□ -0.26
CPA4-207ENST00000488025 TMEM2Q9UHN6 1383 aa13.42□□□□□ -0.26
CPA4-207ENST00000488025 GCC2Q8IWJ2 1684 aa13.41□□□□□ -0.26
CPA4-207ENST00000488025 RGS12O14924 1447 aa13.41□□□□□ -0.26
CPA4-207ENST00000488025 CEP162Q5TB80 1403 aa13.41□□□□□ -0.26
CPA4-207ENST00000488025 AHDC1Q5TGY3 1603 aaPredicted RBP13.41□□□□□ -0.26
CPA4-207ENST00000488025 CDK12Q9NYV4 1490 aaPredicted RBP13.4□□□□□ -0.26
CPA4-207ENST00000488025 SPATA31A6Q5VVP1 1343 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms