RNA–Protein interactions for RNA: ENST00000487719.1

LCN2-205, Transcript of lipocalin 2, humanhuman

TSL 1 (best)

Gene LCN2, Length 427 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN2-205ENST00000487719 PPARGC1BQ86YN6 1023 aaKnown RBP14.3□□□□□ -0.12
LCN2-205ENST00000487719 KDM5DQ9BY66 1539 aa14.3□□□□□ -0.12
LCN2-205ENST00000487719 ERBINQ96RT1 1412 aa14.29□□□□□ -0.12
LCN2-205ENST00000487719 CFAP65Q6ZU64 1925 aaKnown RBP14.28□□□□□ -0.12
LCN2-205ENST00000487719 CEP152O94986 1710 aa14.27□□□□□ -0.13
LCN2-205ENST00000487719 ADGRL2O95490 1459 aa14.26□□□□□ -0.13
LCN2-205ENST00000487719 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.26□□□□□ -0.13
LCN2-205ENST00000487719 RRP7BPQ9NSQ0 103 aa14.26□□□□□ -0.13
LCN2-205ENST00000487719 CHIC2Q9UKJ5 165 aa14.26□□□□□ -0.13
LCN2-205ENST00000487719 UHRF1BP1Q6BDS2 1440 aa14.25□□□□□ -0.13
LCN2-205ENST00000487719 WASHC2CQ9Y4E1 1318 aa14.25□□□□□ -0.13
LCN2-205ENST00000487719 NPATQ14207 1427 aa14.24□□□□□ -0.13
LCN2-205ENST00000487719 ZMYM3Q14202 1370 aa14.24□□□□□ -0.13
LCN2-205ENST00000487719 KANK1Q14678 1352 aa14.24□□□□□ -0.13
LCN2-205ENST00000487719 NCOA1Q15788 1441 aa14.24□□□□□ -0.13
LCN2-205ENST00000487719 DEPDC5O75140 1603 aa14.23□□□□□ -0.13
LCN2-205ENST00000487719 CEBPAP49715 358 aaPredicted RBP14.23□□□□□ -0.13
LCN2-205ENST00000487719 PRDM15P57071 1507 aaPredicted RBP14.22□□□□□ -0.13
LCN2-205ENST00000487719 LMTK3Q96Q04 1460 aa14.22□□□□□ -0.13
LCN2-205ENST00000487719 RRBP1Q9P2E9 1410 aaKnown RBP14.22□□□□□ -0.13
LCN2-205ENST00000487719 CAMSAP1Q5T5Y3 1602 aa14.22□□□□□ -0.13
LCN2-205ENST00000487719 ITGAEP38570 1179 aa14.21□□□□□ -0.13
LCN2-205ENST00000487719 MYO3AQ8NEV4 1616 aa14.21□□□□□ -0.13
LCN2-205ENST00000487719 ROCK1Q13464 1354 aa14.21□□□□□ -0.14
LCN2-205ENST00000487719 ABCC3O15438 1527 aa14.2□□□□□ -0.14
LCN2-205ENST00000487719 ZNF142P52746 1687 aaPredicted RBP14.2□□□□□ -0.14
LCN2-205ENST00000487719 MROH1Q8NDA8 1641 aa14.19□□□□□ -0.14
LCN2-205ENST00000487719 ANKRD50Q9ULJ7 1429 aa14.19□□□□□ -0.14
LCN2-205ENST00000487719 PZPP20742 1482 aa14.18□□□□□ -0.14
LCN2-205ENST00000487719 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.17□□□□□ -0.14
LCN2-205ENST00000487719 GCC2Q8IWJ2 1684 aa14.16□□□□□ -0.14
LCN2-205ENST00000487719 PTPRKQ15262 1439 aa14.15□□□□□ -0.14
LCN2-205ENST00000487719 CEP170BQ9Y4F5 1589 aaPredicted RBP14.15□□□□□ -0.14
LCN2-205ENST00000487719 UNC13BO14795 1591 aa14.14□□□□□ -0.15
LCN2-205ENST00000487719 TNRQ92752 1358 aa14.13□□□□□ -0.15
LCN2-205ENST00000487719 TET3O43151 1660 aa14.13□□□□□ -0.15
LCN2-205ENST00000487719 HSPA2P54652 639 aa14.12□□□□□ -0.15
LCN2-205ENST00000487719 LMTK2Q8IWU2 1503 aa14.11□□□□□ -0.15
LCN2-205ENST00000487719 SPATA31D1Q6ZQQ2 1576 aa14.11□□□□□ -0.15
LCN2-205ENST00000487719 VWDEQ8N2E2 1590 aa14.11□□□□□ -0.15
LCN2-205ENST00000487719 A2ML1A8K2U0 1454 aa14.11□□□□□ -0.15
LCN2-205ENST00000487719 NLRP1Q9C000 1473 aa14.11□□□□□ -0.15
LCN2-205ENST00000487719 EFCAB6Q5THR3 1501 aa14.1□□□□□ -0.15
LCN2-205ENST00000487719 POLR1AO95602 1720 aaPredicted RBP14.1□□□□□ -0.15
LCN2-205ENST00000487719 ARHGAP31Q2M1Z3 1444 aa14.1□□□□□ -0.15
LCN2-205ENST00000487719 DMRT2Q9Y5R5 561 aa14.1□□□□□ -0.15
LCN2-205ENST00000487719 IQGAP3Q86VI3 1631 aa14.1□□□□□ -0.15
LCN2-205ENST00000487719 STRCQ7RTU9 1775 aa14.09□□□□□ -0.15
LCN2-205ENST00000487719 ERVK-7P63135 1459 aa14.09□□□□□ -0.15
LCN2-205ENST00000487719 RPRD2Q5VT52 1461 aaKnown RBP14.07□□□□□ -0.16
LCN2-205ENST00000487719 UGGT1Q9NYU2 1555 aa14.07□□□□□ -0.16
LCN2-205ENST00000487719 FBXO31Q5XUX0 539 aaPredicted RBP14.06□□□□□ -0.16
LCN2-205ENST00000487719 PLA2R1Q13018 1463 aa14.06□□□□□ -0.16
LCN2-205ENST00000487719 KDM5AP29375 1690 aaKnown RBP14.05□□□□□ -0.16
LCN2-205ENST00000487719 HFM1A2PYH4 1435 aa14.05□□□□□ -0.16
LCN2-205ENST00000487719 UBR1Q8IWV7 1749 aa14.04□□□□□ -0.16
LCN2-205ENST00000487719 THEMISQ8N1K5 641 aaPredicted RBP14.04□□□□□ -0.16
LCN2-205ENST00000487719 NUP155O75694 1391 aa14.04□□□□□ -0.16
LCN2-205ENST00000487719 E9PCH4 1651 aa14.04□□□□□ -0.16
LCN2-205ENST00000487719 PKD2Q13563 968 aa14.03□□□□□ -0.16
LCN2-205ENST00000487719 STAG3Q9UJ98 1225 aa14.03□□□□□ -0.16
LCN2-205ENST00000487719 NAIPQ13075 1403 aa14.03□□□□□ -0.16
LCN2-205ENST00000487719 PIK3C2BO00750 1634 aa14.02□□□□□ -0.16
LCN2-205ENST00000487719 ACIN1Q9UKV3 1341 aaKnown RBP14.02□□□□□ -0.17
LCN2-205ENST00000487719 SPHKAPQ2M3C7 1700 aa14.01□□□□□ -0.17
LCN2-205ENST00000487719 PTPRTO14522 1441 aa14□□□□□ -0.17
LCN2-205ENST00000487719 MYO5BQ9ULV0 1848 aa14□□□□□ -0.17
LCN2-205ENST00000487719 TRIM52Q96A61 297 aa13.99□□□□□ -0.17
LCN2-205ENST00000487719 SYNMO15061 1565 aa13.99□□□□□ -0.17
LCN2-205ENST00000487719 ANKLE2Q86XL3 938 aa13.98□□□□□ -0.17
LCN2-205ENST00000487719 SLC52A1Q9NWF4 448 aa13.98□□□□□ -0.17
LCN2-205ENST00000487719 NOS1P29475 1434 aa13.98□□□□□ -0.17
LCN2-205ENST00000487719 KIF1BO60333 1816 aa13.97□□□□□ -0.17
LCN2-205ENST00000487719 ADGRB3O60242 1522 aa13.97□□□□□ -0.17
LCN2-205ENST00000487719 IQGAP1P46940 1657 aa13.97□□□□□ -0.17
LCN2-205ENST00000487719 EID1Q9Y6B2 187 aa13.95□□□□□ -0.18
LCN2-205ENST00000487719 NCKAP5LQ9HCH0 1330 aa13.94□□□□□ -0.18
LCN2-205ENST00000487719 SLIT1O75093 1534 aa13.93□□□□□ -0.18
LCN2-205ENST00000487719 NEURL4Q96JN8 1562 aa13.92□□□□□ -0.18
LCN2-205ENST00000487719 HDGFP51858 240 aaKnown RBP13.92□□□□□ -0.18
LCN2-205ENST00000487719 SCAF11Q99590 1463 aaKnown RBP13.92□□□□□ -0.18
LCN2-205ENST00000487719 NPHP4O75161 1426 aaPredicted RBP13.91□□□□□ -0.18
LCN2-205ENST00000487719 SETD5Q9C0A6 1442 aa13.91□□□□□ -0.18
LCN2-205ENST00000487719 IDI1Q13907 227 aa13.91□□□□□ -0.18
LCN2-205ENST00000487719 SLC4A1APQ9BWU0 796 aaKnown RBP13.91□□□□□ -0.18
LCN2-205ENST00000487719 TMEM131LA2VDJ0 1609 aa13.9□□□□□ -0.18
LCN2-205ENST00000487719 CHGAP10645 457 aaKnown RBP13.9□□□□□ -0.18
LCN2-205ENST00000487719 MED14O60244 1454 aa13.9□□□□□ -0.18
LCN2-205ENST00000487719 TRPM2O94759 1503 aa13.9□□□□□ -0.19
LCN2-205ENST00000487719 ARHGAP23Q9P227 1491 aa13.89□□□□□ -0.19
LCN2-205ENST00000487719 TMEM2Q9UHN6 1383 aa13.89□□□□□ -0.19
LCN2-205ENST00000487719 TXNDC2Q86VQ3 553 aa13.89□□□□□ -0.19
LCN2-205ENST00000487719 PPP1R15AO75807 674 aaPredicted RBP13.87□□□□□ -0.19
LCN2-205ENST00000487719 BCANQ96GW7 911 aa13.86□□□□□ -0.19
LCN2-205ENST00000487719 CLTCL1P53675 1640 aa13.86□□□□□ -0.19
LCN2-205ENST00000487719 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.85□□□□□ -0.19
LCN2-205ENST00000487719 RAB3GAP2Q9H2M9 1393 aa13.84□□□□□ -0.19
LCN2-205ENST00000487719 CERKQ8TCT0 537 aa13.84□□□□□ -0.19
LCN2-205ENST00000487719 CPS1P31327 1500 aa13.84□□□□□ -0.19
LCN2-205ENST00000487719 RIMS2Q9UQ26 1411 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms