RNA–Protein interactions for RNA: ENST00000487645.1

COL4A6-207, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 3

Gene COL4A6, Length 812 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-207ENST00000487645 DEPDC5O75140 1603 aa19.97■□□□□ 0.79
COL4A6-207ENST00000487645 KDM4FA0A1W2PPD8 638 aa19.96■□□□□ 0.79
COL4A6-207ENST00000487645 FER1L4A9Z1Z3 1794 aa19.95■□□□□ 0.78
COL4A6-207ENST00000487645 FAM135AQ9P2D6 1515 aa19.94■□□□□ 0.78
COL4A6-207ENST00000487645 ESF1Q9H501 851 aaKnown RBP19.94■□□□□ 0.78
COL4A6-207ENST00000487645 ACIN1Q9UKV3 1341 aaKnown RBP19.94■□□□□ 0.78
COL4A6-207ENST00000487645 SETD5Q9C0A6 1442 aa19.93■□□□□ 0.78
COL4A6-207ENST00000487645 MROH1Q8NDA8 1641 aa19.93■□□□□ 0.78
COL4A6-207ENST00000487645 MADDQ8WXG6 1647 aa19.92■□□□□ 0.78
COL4A6-207ENST00000487645 WASHC2CQ9Y4E1 1318 aa19.92■□□□□ 0.78
COL4A6-207ENST00000487645 CNTLNQ9NXG0 1405 aa19.92■□□□□ 0.78
COL4A6-207ENST00000487645 PRDM15P57071 1507 aaPredicted RBP19.92■□□□□ 0.78
COL4A6-207ENST00000487645 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.91■□□□□ 0.78
COL4A6-207ENST00000487645 KANK1Q14678 1352 aa19.91■□□□□ 0.78
COL4A6-207ENST00000487645 UNC13BO14795 1591 aa19.91■□□□□ 0.78
COL4A6-207ENST00000487645 HRCP23327 699 aa19.9■□□□□ 0.78
COL4A6-207ENST00000487645 MROH2AA6NES4 1674 aa19.89■□□□□ 0.77
COL4A6-207ENST00000487645 CLTCQ00610 1675 aaKnown RBP19.89■□□□□ 0.77
COL4A6-207ENST00000487645 ZC3H13Q5T200 1668 aaKnown RBP19.89■□□□□ 0.77
COL4A6-207ENST00000487645 RIMS1Q86UR5 1692 aaKnown RBP19.89■□□□□ 0.77
COL4A6-207ENST00000487645 KDM5DQ9BY66 1539 aa19.89■□□□□ 0.77
COL4A6-207ENST00000487645 VWDEQ8N2E2 1590 aa19.87■□□□□ 0.77
COL4A6-207ENST00000487645 CEP152O94986 1710 aa19.86■□□□□ 0.77
COL4A6-207ENST00000487645 ABCC3O15438 1527 aa19.85■□□□□ 0.77
COL4A6-207ENST00000487645 NUP155O75694 1391 aa19.84■□□□□ 0.77
COL4A6-207ENST00000487645 ZMYM3Q14202 1370 aa19.84■□□□□ 0.77
COL4A6-207ENST00000487645 RAB3GAP2Q9H2M9 1393 aa19.84■□□□□ 0.77
COL4A6-207ENST00000487645 LMTK2Q8IWU2 1503 aa19.84■□□□□ 0.77
COL4A6-207ENST00000487645 PTPRMP28827 1452 aa19.84■□□□□ 0.77
COL4A6-207ENST00000487645 IQGAP3Q86VI3 1631 aa19.84■□□□□ 0.77
COL4A6-207ENST00000487645 SETD1BQ9UPS6 1966 aaKnown RBP19.83■□□□□ 0.76
COL4A6-207ENST00000487645 C3P01024 1663 aa19.82■□□□□ 0.76
COL4A6-207ENST00000487645 TRIM52Q96A61 297 aa19.82■□□□□ 0.76
COL4A6-207ENST00000487645 CFAP65Q6ZU64 1925 aaKnown RBP19.82■□□□□ 0.76
COL4A6-207ENST00000487645 CAMSAP1Q5T5Y3 1602 aa19.8■□□□□ 0.76
COL4A6-207ENST00000487645 ARHGAP31Q2M1Z3 1444 aa19.8■□□□□ 0.76
COL4A6-207ENST00000487645 TET3O43151 1660 aa19.8■□□□□ 0.76
COL4A6-207ENST00000487645 CEBPAP49715 358 aaPredicted RBP19.78■□□□□ 0.76
COL4A6-207ENST00000487645 PZPP20742 1482 aa19.76■□□□□ 0.75
COL4A6-207ENST00000487645 PCGF6Q9BYE7 350 aa19.76■□□□□ 0.75
COL4A6-207ENST00000487645 EFCAB6Q5THR3 1501 aa19.76■□□□□ 0.75
COL4A6-207ENST00000487645 RPRD2Q5VT52 1461 aaKnown RBP19.74■□□□□ 0.75
COL4A6-207ENST00000487645 NPATQ14207 1427 aa19.74■□□□□ 0.75
COL4A6-207ENST00000487645 SLC4A1APQ9BWU0 796 aaKnown RBP19.73■□□□□ 0.75
COL4A6-207ENST00000487645 E9PCH4 1651 aa19.72■□□□□ 0.75
COL4A6-207ENST00000487645 PLPPR3Q6T4P5 718 aa19.72■□□□□ 0.75
COL4A6-207ENST00000487645 MPHOSPH9Q99550 1183 aa19.72■□□□□ 0.75
COL4A6-207ENST00000487645 FBXO31Q5XUX0 539 aaPredicted RBP19.71■□□□□ 0.75
COL4A6-207ENST00000487645 PREX1Q8TCU6 1659 aa19.71■□□□□ 0.75
COL4A6-207ENST00000487645 PKD2Q13563 968 aa19.68■□□□□ 0.74
COL4A6-207ENST00000487645 AEBP2Q6ZN18 517 aaPredicted RBP19.68■□□□□ 0.74
COL4A6-207ENST00000487645 SPATA31D1Q6ZQQ2 1576 aa19.68■□□□□ 0.74
COL4A6-207ENST00000487645 ERVK-7P63135 1459 aa19.67■□□□□ 0.74
COL4A6-207ENST00000487645 TNRQ92752 1358 aa19.66■□□□□ 0.74
COL4A6-207ENST00000487645 NOS1P29475 1434 aa19.66■□□□□ 0.74
COL4A6-207ENST00000487645 SPHKAPQ2M3C7 1700 aa19.63■□□□□ 0.73
COL4A6-207ENST00000487645 PTPRTO14522 1441 aa19.63■□□□□ 0.73
COL4A6-207ENST00000487645 SLC52A1Q9NWF4 448 aa19.62■□□□□ 0.73
COL4A6-207ENST00000487645 NLRP1Q9C000 1473 aa19.6■□□□□ 0.73
COL4A6-207ENST00000487645 SYNMO15061 1565 aa19.6■□□□□ 0.73
COL4A6-207ENST00000487645 UHRF1BP1Q6BDS2 1440 aa19.59■□□□□ 0.73
COL4A6-207ENST00000487645 MYO3AQ8NEV4 1616 aa19.58■□□□□ 0.73
COL4A6-207ENST00000487645 FOXD1Q16676 465 aa19.58■□□□□ 0.72
COL4A6-207ENST00000487645 IDI1Q13907 227 aa19.57■□□□□ 0.72
COL4A6-207ENST00000487645 PIK3C2BO00750 1634 aa19.57■□□□□ 0.72
COL4A6-207ENST00000487645 ZNF142P52746 1687 aaPredicted RBP19.56■□□□□ 0.72
COL4A6-207ENST00000487645 PLA2R1Q13018 1463 aa19.56■□□□□ 0.72
COL4A6-207ENST00000487645 TRPM2O94759 1503 aa19.56■□□□□ 0.72
COL4A6-207ENST00000487645 A2ML1A8K2U0 1454 aa19.55■□□□□ 0.72
COL4A6-207ENST00000487645 KDM5AP29375 1690 aaKnown RBP19.55■□□□□ 0.72
COL4A6-207ENST00000487645 CEP170BQ9Y4F5 1589 aaPredicted RBP19.53■□□□□ 0.72
COL4A6-207ENST00000487645 ANKRD30BQ9BXX2 1392 aa19.53■□□□□ 0.72
COL4A6-207ENST00000487645 KIF1BO60333 1816 aa19.52■□□□□ 0.72
COL4A6-207ENST00000487645 DHX57Q6P158 1386 aaKnown RBP19.52■□□□□ 0.72
COL4A6-207ENST00000487645 LMTK3Q96Q04 1460 aa19.52■□□□□ 0.72
COL4A6-207ENST00000487645 UBR1Q8IWV7 1749 aa19.51■□□□□ 0.71
COL4A6-207ENST00000487645 THEMISQ8N1K5 641 aaPredicted RBP19.51■□□□□ 0.71
COL4A6-207ENST00000487645 UGGT1Q9NYU2 1555 aa19.51■□□□□ 0.71
COL4A6-207ENST00000487645 CLTCL1P53675 1640 aa19.5■□□□□ 0.71
COL4A6-207ENST00000487645 MYO5BQ9ULV0 1848 aa19.49■□□□□ 0.71
COL4A6-207ENST00000487645 STAG3Q9UJ98 1225 aa19.49■□□□□ 0.71
COL4A6-207ENST00000487645 CCDC144AA2RUR9 1427 aa19.49■□□□□ 0.71
COL4A6-207ENST00000487645 TMEM131LA2VDJ0 1609 aa19.48■□□□□ 0.71
COL4A6-207ENST00000487645 ADGRB3O60242 1522 aa19.46■□□□□ 0.71
COL4A6-207ENST00000487645 CHGAP10645 457 aaKnown RBP19.45■□□□□ 0.7
COL4A6-207ENST00000487645 HSPA2P54652 639 aa19.43■□□□□ 0.7
COL4A6-207ENST00000487645 NEURL4Q96JN8 1562 aa19.42■□□□□ 0.7
COL4A6-207ENST00000487645 HDGFP51858 240 aaKnown RBP19.41■□□□□ 0.7
COL4A6-207ENST00000487645 SLIT1O75093 1534 aa19.41■□□□□ 0.7
COL4A6-207ENST00000487645 ANKLE2Q86XL3 938 aa19.4■□□□□ 0.7
COL4A6-207ENST00000487645 TMEM2Q9UHN6 1383 aa19.4■□□□□ 0.7
COL4A6-207ENST00000487645 ARHGAP23Q9P227 1491 aa19.4■□□□□ 0.7
COL4A6-207ENST00000487645 RPGRIP1LQ68CZ1 1315 aa19.38■□□□□ 0.69
COL4A6-207ENST00000487645 SPATA31E1Q6ZUB1 1445 aa19.38■□□□□ 0.69
COL4A6-207ENST00000487645 STRCQ7RTU9 1775 aa19.38■□□□□ 0.69
COL4A6-207ENST00000487645 CLSPNQ9HAW4 1339 aa19.38■□□□□ 0.69
COL4A6-207ENST00000487645 EID1Q9Y6B2 187 aa19.38■□□□□ 0.69
COL4A6-207ENST00000487645 ZNF326Q5BKZ1 582 aaKnown RBP19.37■□□□□ 0.69
COL4A6-207ENST00000487645 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.37■□□□□ 0.69
COL4A6-207ENST00000487645 POLR1AO95602 1720 aaPredicted RBP19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms