RNA–Protein interactions for RNA: ENST00000487445.6

GCA-210, Transcript of grancalcin, humanhuman

TSL 5

Gene GCA, Length 1,808 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCA-210ENST00000487445 ZMYM4Q5VZL5 1548 aa21.21■□□□□ 0.99
GCA-210ENST00000487445 ABCA6Q8N139 1617 aa21.2■□□□□ 0.98
GCA-210ENST00000487445 PKD2Q13563 968 aa21.2■□□□□ 0.98
GCA-210ENST00000487445 GGT6Q6P531 493 aa21.2■□□□□ 0.98
GCA-210ENST00000487445 PZPP20742 1482 aa21.19■□□□□ 0.98
GCA-210ENST00000487445 DIP2CQ9Y2E4 1556 aa21.18■□□□□ 0.98
GCA-210ENST00000487445 NEUROD1Q13562 356 aa21.18■□□□□ 0.98
GCA-210ENST00000487445 SIN3AQ96ST3 1273 aa21.18■□□□□ 0.98
GCA-210ENST00000487445 ATP10AO60312 1499 aa21.16■□□□□ 0.98
GCA-210ENST00000487445 KANK1Q14678 1352 aa21.14■□□□□ 0.98
GCA-210ENST00000487445 FAM135AQ9P2D6 1515 aa21.13■□□□□ 0.97
GCA-210ENST00000487445 KDM5DQ9BY66 1539 aa21.12■□□□□ 0.97
GCA-210ENST00000487445 UNC13BO14795 1591 aa21.11■□□□□ 0.97
GCA-210ENST00000487445 EIF2AK4Q9P2K8 1649 aaKnown RBP21.09■□□□□ 0.97
GCA-210ENST00000487445 ARID4BQ4LE39 1312 aaPredicted RBP21.08■□□□□ 0.97
GCA-210ENST00000487445 MLECQ14165 292 aa21.08■□□□□ 0.96
GCA-210ENST00000487445 WASHC2CQ9Y4E1 1318 aa21.08■□□□□ 0.96
GCA-210ENST00000487445 ANKRD30BQ9BXX2 1392 aa21.07■□□□□ 0.96
GCA-210ENST00000487445 ARHGEF40Q8TER5 1519 aa21.06■□□□□ 0.96
GCA-210ENST00000487445 PRDM15P57071 1507 aaPredicted RBP21.03■□□□□ 0.96
GCA-210ENST00000487445 DEPDC5O75140 1603 aa21.03■□□□□ 0.96
GCA-210ENST00000487445 IQGAP3Q86VI3 1631 aa21.03■□□□□ 0.96
GCA-210ENST00000487445 MROH1Q8NDA8 1641 aa21.02■□□□□ 0.96
GCA-210ENST00000487445 REREQ9P2R6 1566 aa21■□□□□ 0.95
GCA-210ENST00000487445 RNF17Q9BXT8 1623 aaKnown RBP20.99■□□□□ 0.95
GCA-210ENST00000487445 VWDEQ8N2E2 1590 aa20.99■□□□□ 0.95
GCA-210ENST00000487445 AGLP35573 1532 aa20.99■□□□□ 0.95
GCA-210ENST00000487445 TONSLQ96HA7 1378 aa20.98■□□□□ 0.95
GCA-210ENST00000487445 BCORL1Q5H9F3 1711 aa20.96■□□□□ 0.95
GCA-210ENST00000487445 ESF1Q9H501 851 aaKnown RBP20.96■□□□□ 0.95
GCA-210ENST00000487445 TIMELESSQ9UNS1 1208 aa20.94■□□□□ 0.94
GCA-210ENST00000487445 PPP6R1Q9UPN7 881 aa20.94■□□□□ 0.94
GCA-210ENST00000487445 ABCC3O15438 1527 aa20.94■□□□□ 0.94
GCA-210ENST00000487445 LMTK2Q8IWU2 1503 aa20.93■□□□□ 0.94
GCA-210ENST00000487445 PLA2R1Q13018 1463 aa20.93■□□□□ 0.94
GCA-210ENST00000487445 SIGLEC1Q9BZZ2 1709 aa20.92■□□□□ 0.94
GCA-210ENST00000487445 CCDC144AA2RUR9 1427 aa20.92■□□□□ 0.94
GCA-210ENST00000487445 RPRD2Q5VT52 1461 aaKnown RBP20.92■□□□□ 0.94
GCA-210ENST00000487445 TET3O43151 1660 aa20.91■□□□□ 0.94
GCA-210ENST00000487445 NPATQ14207 1427 aa20.9■□□□□ 0.94
GCA-210ENST00000487445 EFCAB6Q5THR3 1501 aa20.9■□□□□ 0.94
GCA-210ENST00000487445 L3MBTL2Q969R5 705 aa20.89■□□□□ 0.93
GCA-210ENST00000487445 E9PCH4 1651 aa20.88■□□□□ 0.93
GCA-210ENST00000487445 CEP152O94986 1710 aa20.88■□□□□ 0.93
GCA-210ENST00000487445 PTPRTO14522 1441 aa20.87■□□□□ 0.93
GCA-210ENST00000487445 PPP1R15AO75807 674 aaPredicted RBP20.85■□□□□ 0.93
GCA-210ENST00000487445 RGL3Q3MIN7 710 aa20.85■□□□□ 0.93
GCA-210ENST00000487445 FBXO31Q5XUX0 539 aaPredicted RBP20.84■□□□□ 0.93
GCA-210ENST00000487445 ARHGAP31Q2M1Z3 1444 aa20.83■□□□□ 0.93
GCA-210ENST00000487445 CAMSAP1Q5T5Y3 1602 aa20.81■□□□□ 0.92
GCA-210ENST00000487445 ZC3H13Q5T200 1668 aaKnown RBP20.81■□□□□ 0.92
GCA-210ENST00000487445 ZMYM3Q14202 1370 aa20.81■□□□□ 0.92
GCA-210ENST00000487445 TRPM2O94759 1503 aa20.81■□□□□ 0.92
GCA-210ENST00000487445 CHGAP10645 457 aaKnown RBP20.8■□□□□ 0.92
GCA-210ENST00000487445 KDM2AQ9Y2K7 1162 aa20.79■□□□□ 0.92
GCA-210ENST00000487445 PLPPR3Q6T4P5 718 aa20.78■□□□□ 0.92
GCA-210ENST00000487445 DCAF11Q8TEB1 546 aa20.78■□□□□ 0.92
GCA-210ENST00000487445 CNTLNQ9NXG0 1405 aa20.78■□□□□ 0.92
GCA-210ENST00000487445 NOS1P29475 1434 aa20.77■□□□□ 0.92
GCA-210ENST00000487445 ZNF326Q5BKZ1 582 aaKnown RBP20.77■□□□□ 0.92
GCA-210ENST00000487445 UGGT1Q9NYU2 1555 aa20.77■□□□□ 0.92
GCA-210ENST00000487445 CLTCQ00610 1675 aaKnown RBP20.77■□□□□ 0.91
GCA-210ENST00000487445 CEBPAP49715 358 aaPredicted RBP20.76■□□□□ 0.91
GCA-210ENST00000487445 SPHKAPQ2M3C7 1700 aa20.75■□□□□ 0.91
GCA-210ENST00000487445 IDI1Q13907 227 aa20.74■□□□□ 0.91
GCA-210ENST00000487445 SLC52A1Q9NWF4 448 aa20.74■□□□□ 0.91
GCA-210ENST00000487445 CLTCL1P53675 1640 aa20.73■□□□□ 0.91
GCA-210ENST00000487445 ERVK-7P63135 1459 aa20.72■□□□□ 0.91
GCA-210ENST00000487445 SPATA31E1Q6ZUB1 1445 aa20.71■□□□□ 0.91
GCA-210ENST00000487445 NBPF8Q3BBV2 869 aa20.7■□□□□ 0.9
GCA-210ENST00000487445 STAG3Q9UJ98 1225 aa20.69■□□□□ 0.9
GCA-210ENST00000487445 CFAP65Q6ZU64 1925 aaKnown RBP20.68■□□□□ 0.9
GCA-210ENST00000487445 SYNMO15061 1565 aa20.68■□□□□ 0.9
GCA-210ENST00000487445 PREX1Q8TCU6 1659 aa20.65■□□□□ 0.9
GCA-210ENST00000487445 TNRQ92752 1358 aa20.65■□□□□ 0.9
GCA-210ENST00000487445 SPATA31D1Q6ZQQ2 1576 aa20.64■□□□□ 0.89
GCA-210ENST00000487445 NUTM2DQ5VT03 806 aaPredicted RBP20.6■□□□□ 0.89
GCA-210ENST00000487445 FER1L4A9Z1Z3 1794 aa20.6■□□□□ 0.89
GCA-210ENST00000487445 MADDQ8WXG6 1647 aa20.6■□□□□ 0.89
GCA-210ENST00000487445 UHRF1BP1Q6BDS2 1440 aa20.59■□□□□ 0.89
GCA-210ENST00000487445 ADGRB3O60242 1522 aa20.59■□□□□ 0.89
GCA-210ENST00000487445 PIK3C2BO00750 1634 aa20.59■□□□□ 0.89
GCA-210ENST00000487445 STAC3Q96MF2 364 aa20.59■□□□□ 0.89
GCA-210ENST00000487445 MROH2AA6NES4 1674 aa20.58■□□□□ 0.89
GCA-210ENST00000487445 RPGRIP1LQ68CZ1 1315 aa20.58■□□□□ 0.88
GCA-210ENST00000487445 PRAG1Q86YV5 1406 aa20.57■□□□□ 0.88
GCA-210ENST00000487445 ADGRF5Q8IZF2 1346 aa20.56■□□□□ 0.88
GCA-210ENST00000487445 ZNF316A6NFI3 1004 aaPredicted RBP20.56■□□□□ 0.88
GCA-210ENST00000487445 NEURL4Q96JN8 1562 aa20.56■□□□□ 0.88
GCA-210ENST00000487445 HIRIP3Q9BW71 556 aaPredicted RBP20.55■□□□□ 0.88
GCA-210ENST00000487445 KIF1BO60333 1816 aa20.55■□□□□ 0.88
GCA-210ENST00000487445 ADAMTSL3P82987 1691 aa20.55■□□□□ 0.88
GCA-210ENST00000487445 RIMS1Q86UR5 1692 aaKnown RBP20.54■□□□□ 0.88
GCA-210ENST00000487445 VGFO15240 615 aaPredicted RBP20.54■□□□□ 0.88
GCA-210ENST00000487445 SENP3Q9H4L4 574 aaPredicted RBP20.54■□□□□ 0.88
GCA-210ENST00000487445 NBPF1Q3BBV0 1214 aa20.53■□□□□ 0.88
GCA-210ENST00000487445 CARD11Q9BXL7 1154 aa20.53■□□□□ 0.88
GCA-210ENST00000487445 C3P01024 1663 aa20.53■□□□□ 0.88
GCA-210ENST00000487445 ROCK2O75116 1388 aaKnown RBP20.52■□□□□ 0.88
GCA-210ENST00000487445 A2ML1A8K2U0 1454 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms