RNA–Protein interactions for RNA: ENST00000487311.1

SRRT-212, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-212ENST00000487311 CCDC141Q6ZP82 1450 aa25.87■■□□□ 1.73
SRRT-212ENST00000487311 A2ML1A8K2U0 1454 aa25.85■■□□□ 1.73
SRRT-212ENST00000487311 DNMT1P26358 1616 aaKnown RBP25.85■■□□□ 1.73
SRRT-212ENST00000487311 WASHC2CQ9Y4E1 1318 aa25.84■■□□□ 1.73
SRRT-212ENST00000487311 UBAP1LF5GYI3 381 aa25.82■■□□□ 1.72
SRRT-212ENST00000487311 TNRQ92752 1358 aa25.82■■□□□ 1.72
SRRT-212ENST00000487311 TSPY4P0CV99 314 aa25.8■■□□□ 1.72
SRRT-212ENST00000487311 TSPY10P0CW01 314 aa25.8■■□□□ 1.72
SRRT-212ENST00000487311 KANK4Q5T7N3 995 aaPredicted RBP25.8■■□□□ 1.72
SRRT-212ENST00000487311 PZPP20742 1482 aa25.79■■□□□ 1.72
SRRT-212ENST00000487311 LRRC9Q6ZRR7 1453 aa25.77■■□□□ 1.72
SRRT-212ENST00000487311 KDM5DQ9BY66 1539 aa25.77■■□□□ 1.72
SRRT-212ENST00000487311 ARHGEF5Q12774 1597 aa25.76■■□□□ 1.71
SRRT-212ENST00000487311 VPS8Q8N3P4 1428 aa25.74■■□□□ 1.71
SRRT-212ENST00000487311 MIA2Q96PC5 1412 aa25.74■■□□□ 1.71
SRRT-212ENST00000487311 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.74■■□□□ 1.71
SRRT-212ENST00000487311 NEURL4Q96JN8 1562 aa25.72■■□□□ 1.71
SRRT-212ENST00000487311 SOCS7O14512 581 aa25.71■■□□□ 1.71
SRRT-212ENST00000487311 ANKLE2Q86XL3 938 aa25.71■■□□□ 1.71
SRRT-212ENST00000487311 THEMISQ8N1K5 641 aaPredicted RBP25.7■■□□□ 1.7
SRRT-212ENST00000487311 SPATA31D1Q6ZQQ2 1576 aa25.69■■□□□ 1.7
SRRT-212ENST00000487311 FAM135AQ9P2D6 1515 aa25.69■■□□□ 1.7
SRRT-212ENST00000487311 SHANK2Q9UPX8 1470 aa25.66■■□□□ 1.7
SRRT-212ENST00000487311 POLR1AO95602 1720 aaPredicted RBP25.66■■□□□ 1.7
SRRT-212ENST00000487311 NLRP1Q9C000 1473 aa25.65■■□□□ 1.7
SRRT-212ENST00000487311 UGGT1Q9NYU2 1555 aa25.64■■□□□ 1.69
SRRT-212ENST00000487311 MAST1Q9Y2H9 1570 aa25.64■■□□□ 1.69
SRRT-212ENST00000487311 PIP4K2BP78356 416 aa25.63■■□□□ 1.69
SRRT-212ENST00000487311 ABCC3O15438 1527 aa25.63■■□□□ 1.69
SRRT-212ENST00000487311 RNF17Q9BXT8 1623 aaKnown RBP25.62■■□□□ 1.69
SRRT-212ENST00000487311 MAP3K1Q13233 1512 aa25.61■■□□□ 1.69
SRRT-212ENST00000487311 MYOM3Q5VTT5 1437 aa25.61■■□□□ 1.69
SRRT-212ENST00000487311 HSPA1LP34931 641 aa25.6■■□□□ 1.69
SRRT-212ENST00000487311 NPHP4O75161 1426 aaPredicted RBP25.6■■□□□ 1.69
SRRT-212ENST00000487311 SCAF1Q9H7N4 1312 aaKnown RBP25.6■■□□□ 1.69
SRRT-212ENST00000487311 MED14O60244 1454 aa25.6■■□□□ 1.69
SRRT-212ENST00000487311 VWDEQ8N2E2 1590 aa25.59■■□□□ 1.69
SRRT-212ENST00000487311 CPS1P31327 1500 aa25.58■■□□□ 1.69
SRRT-212ENST00000487311 MROH1Q8NDA8 1641 aa25.57■■□□□ 1.68
SRRT-212ENST00000487311 TOM1O60784 492 aa25.57■■□□□ 1.68
SRRT-212ENST00000487311 CFAP65Q6ZU64 1925 aaKnown RBP25.56■■□□□ 1.68
SRRT-212ENST00000487311 ERVK-7P63135 1459 aa25.55■■□□□ 1.68
SRRT-212ENST00000487311 DEPDC5O75140 1603 aa25.55■■□□□ 1.68
SRRT-212ENST00000487311 RRP7BPQ9NSQ0 103 aa25.54■■□□□ 1.68
SRRT-212ENST00000487311 EIF2AK4Q9P2K8 1649 aaKnown RBP25.53■■□□□ 1.68
SRRT-212ENST00000487311 ABCC5O15440 1437 aa25.52■■□□□ 1.68
SRRT-212ENST00000487311 ZC3H13Q5T200 1668 aaKnown RBP25.52■■□□□ 1.68
SRRT-212ENST00000487311 DUOX2Q9NRD8 1548 aa25.51■■□□□ 1.67
SRRT-212ENST00000487311 CEP152O94986 1710 aa25.51■■□□□ 1.67
SRRT-212ENST00000487311 ALKQ9UM73 1620 aa25.49■■□□□ 1.67
SRRT-212ENST00000487311 LTKP29376 864 aa25.49■■□□□ 1.67
SRRT-212ENST00000487311 STRCP1A6NGW2 1772 aa25.49■■□□□ 1.67
SRRT-212ENST00000487311 IQGAP1P46940 1657 aa25.48■■□□□ 1.67
SRRT-212ENST00000487311 KIF15Q9NS87 1388 aa25.48■■□□□ 1.67
SRRT-212ENST00000487311 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.48■■□□□ 1.671e-14■■□□□ 14
SRRT-212ENST00000487311 UBR1Q8IWV7 1749 aa25.44■■□□□ 1.66
SRRT-212ENST00000487311 TXNDC2Q86VQ3 553 aa25.44■■□□□ 1.66
SRRT-212ENST00000487311 LRRC7Q96NW7 1537 aa25.43■■□□□ 1.66
SRRT-212ENST00000487311 CHIC2Q9UKJ5 165 aa25.43■■□□□ 1.66
SRRT-212ENST00000487311 PTPN23Q9H3S7 1636 aa25.43■■□□□ 1.66
SRRT-212ENST00000487311 ARHGAP31Q2M1Z3 1444 aa25.42■■□□□ 1.66
SRRT-212ENST00000487311 DAPK1P53355 1430 aa25.41■■□□□ 1.66
SRRT-212ENST00000487311 APLP2Q06481 763 aa25.41■■□□□ 1.66
SRRT-212ENST00000487311 ERBINQ96RT1 1412 aa25.4■■□□□ 1.66
SRRT-212ENST00000487311 SENP3Q9H4L4 574 aaPredicted RBP25.4■■□□□ 1.66
SRRT-212ENST00000487311 PRDM15P57071 1507 aaPredicted RBP25.39■■□□□ 1.66
SRRT-212ENST00000487311 SCAF11Q99590 1463 aaKnown RBP25.39■■□□□ 1.65
SRRT-212ENST00000487311 ARHGAP23Q9P227 1491 aa25.39■■□□□ 1.65
SRRT-212ENST00000487311 CROCC2H7BZ55 1655 aa25.39■■□□□ 1.65
SRRT-212ENST00000487311 MED1Q15648 1581 aaPredicted RBP25.37■■□□□ 1.65
SRRT-212ENST00000487311 SLIT1O75093 1534 aa25.37■■□□□ 1.65
SRRT-212ENST00000487311 FGD6Q6ZV73 1430 aa25.37■■□□□ 1.65
SRRT-212ENST00000487311 IDI1Q13907 227 aa25.35■■□□□ 1.65
SRRT-212ENST00000487311 EID1Q9Y6B2 187 aa25.33■■□□□ 1.65
SRRT-212ENST00000487311 TMEM2Q9UHN6 1383 aa25.31■■□□□ 1.64
SRRT-212ENST00000487311 PIK3C2BO00750 1634 aa25.31■■□□□ 1.64
SRRT-212ENST00000487311 KANK1Q14678 1352 aa25.31■■□□□ 1.64
SRRT-212ENST00000487311 ANKRD30AQ9BXX3 1397 aa25.31■■□□□ 1.64
SRRT-212ENST00000487311 STAG3Q9UJ98 1225 aa25.3■■□□□ 1.64
SRRT-212ENST00000487311 SYNMO15061 1565 aa25.27■■□□□ 1.64
SRRT-212ENST00000487311 LMTK2Q8IWU2 1503 aa25.26■■□□□ 1.63
SRRT-212ENST00000487311 XIRP1Q702N8 1843 aaKnown RBP25.25■■□□□ 1.63
SRRT-212ENST00000487311 SLC26A8Q96RN1 970 aa25.24■■□□□ 1.63
SRRT-212ENST00000487311 NOS1P29475 1434 aa25.22■■□□□ 1.63
SRRT-212ENST00000487311 FAM50AQ14320 339 aaKnown RBP25.22■■□□□ 1.63
SRRT-212ENST00000487311 RBM33Q96EV2 1170 aaKnown RBP25.22■■□□□ 1.63
SRRT-212ENST00000487311 EFCAB6Q5THR3 1501 aa25.22■■□□□ 1.63
SRRT-212ENST00000487311 PHF23Q9BUL5 403 aaPredicted RBP25.21■■□□□ 1.63
SRRT-212ENST00000487311 KCNA6P17658 529 aa25.2■■□□□ 1.62
SRRT-212ENST00000487311 TET3O43151 1660 aa25.19■■□□□ 1.62
SRRT-212ENST00000487311 ADGRL2O95490 1459 aa25.18■■□□□ 1.62
SRRT-212ENST00000487311 SLC52A1Q9NWF4 448 aa25.17■■□□□ 1.62
SRRT-212ENST00000487311 TMEM94Q12767 1356 aa25.17■■□□□ 1.62
SRRT-212ENST00000487311 KDM5AP29375 1690 aaKnown RBP25.17■■□□□ 1.62
SRRT-212ENST00000487311 RGS17Q9UGC6 210 aaPredicted RBP25.16■■□□□ 1.62
SRRT-212ENST00000487311 PROSER2Q86WR7 435 aaPredicted RBP25.15■■□□□ 1.62
SRRT-212ENST00000487311 ANKRD50Q9ULJ7 1429 aa25.13■■□□□ 1.61
SRRT-212ENST00000487311 FAM135BQ49AJ0 1406 aa25.12■■□□□ 1.61
SRRT-212ENST00000487311 ADGRB3O60242 1522 aa25.11■■□□□ 1.61
SRRT-212ENST00000487311 BCANQ96GW7 911 aa25.1■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms