RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 ABCC1P33527 1531 aa35.91■■■■□ 3.34
HLA-C-208ENST00000487245 BCORL1Q5H9F3 1711 aa35.89■■■■□ 3.34
HLA-C-208ENST00000487245 CCDC144AA2RUR9 1427 aa35.89■■■■□ 3.34
HLA-C-208ENST00000487245 MAGI2Q86UL8 1455 aa35.86■■■■□ 3.33
HLA-C-208ENST00000487245 CARD11Q9BXL7 1154 aa35.86■■■■□ 3.33
HLA-C-208ENST00000487245 ROCK2O75116 1388 aaKnown RBP35.85■■■■□ 3.33
HLA-C-208ENST00000487245 DCAF11Q8TEB1 546 aa35.85■■■■□ 3.33
HLA-C-208ENST00000487245 CCDC184Q52MB2 194 aa35.84■■■■□ 3.33
HLA-C-208ENST00000487245 ATP10AO60312 1499 aa35.8■■■■□ 3.32
HLA-C-208ENST00000487245 ERICH6BQ5W0A0 696 aa35.8■■■■□ 3.32
HLA-C-208ENST00000487245 KDM2AQ9Y2K7 1162 aa35.8■■■■□ 3.32
HLA-C-208ENST00000487245 RTEL1-TNFRSF6BF6WH68 1400 aa35.8■■■■□ 3.32
HLA-C-208ENST00000487245 DHX29Q7Z478 1369 aaKnown RBP35.8■■■■□ 3.32
HLA-C-208ENST00000487245 GRWD1Q9BQ67 446 aaKnown RBP eCLIP35.79■■■■□ 3.32
HLA-C-208ENST00000487245 PLA2R1Q13018 1463 aa35.78■■■■□ 3.32
HLA-C-208ENST00000487245 MRS2Q9HD23 443 aa35.77■■■■□ 3.32
HLA-C-208ENST00000487245 ZBED9Q6R2W3 1325 aa35.76■■■■□ 3.32
HLA-C-208ENST00000487245 TRAPPC8Q9Y2L5 1435 aa35.76■■■■□ 3.31
HLA-C-208ENST00000487245 WDR7Q9Y4E6 1490 aa35.75■■■■□ 3.31
HLA-C-208ENST00000487245 PRAG1Q86YV5 1406 aa35.73■■■■□ 3.31
HLA-C-208ENST00000487245 SPAG9O60271 1321 aaKnown RBP35.71■■■■□ 3.31
HLA-C-208ENST00000487245 TRPM1Q7Z4N2 1603 aa35.7■■■■□ 3.31
HLA-C-208ENST00000487245 LAMC1P11047 1609 aa35.65■■■■□ 3.3
HLA-C-208ENST00000487245 ABCA9Q8IUA7 1624 aa35.65■■■■□ 3.3
HLA-C-208ENST00000487245 ST20-MTHFSA0A0A6YYL1 179 aa35.65■■■■□ 3.3
HLA-C-208ENST00000487245 A2MP01023 1474 aa35.64■■■■□ 3.3
HLA-C-208ENST00000487245 GPRASP1Q5JY77 1395 aa35.64■■■■□ 3.3
HLA-C-208ENST00000487245 ZFYVE16Q7Z3T8 1539 aa35.63■■■■□ 3.29
HLA-C-208ENST00000487245 FAM9BQ8IZU0 186 aa35.63■■■■□ 3.29
HLA-C-208ENST00000487245 POLR3GLQ9BT43 218 aa35.63■■■■□ 3.29
HLA-C-208ENST00000487245 EIF2AK4Q9P2K8 1649 aaKnown RBP35.62■■■■□ 3.29
HLA-C-208ENST00000487245 RGL3Q3MIN7 710 aa35.58■■■■□ 3.29
HLA-C-208ENST00000487245 E9PCH4 1651 aa35.58■■■■□ 3.29
HLA-C-208ENST00000487245 FANCAO15360 1455 aa35.58■■■■□ 3.29
HLA-C-208ENST00000487245 OSCARQ8IYS5 282 aa35.58■■■■□ 3.29
HLA-C-208ENST00000487245 AFAP1Q8N556 730 aa35.56■■■■□ 3.28
HLA-C-208ENST00000487245 KTN1Q86UP2 1357 aaKnown RBP35.55■■■■□ 3.28
HLA-C-208ENST00000487245 DEPDC5O75140 1603 aa35.53■■■■□ 3.28
HLA-C-208ENST00000487245 INO80Q9ULG1 1556 aaPredicted RBP35.53■■■■□ 3.28
HLA-C-208ENST00000487245 ATP7AQ04656 1500 aa35.51■■■■□ 3.28
HLA-C-208ENST00000487245 PRDM15P57071 1507 aaPredicted RBP35.5■■■■□ 3.27
HLA-C-208ENST00000487245 ASXL2Q76L83 1435 aa35.48■■■■□ 3.27
HLA-C-208ENST00000487245 STAC3Q96MF2 364 aa35.48■■■■□ 3.27
HLA-C-208ENST00000487245 RBM19Q9Y4C8 960 aaKnown RBP35.48■■■■□ 3.27
HLA-C-208ENST00000487245 SMG6Q86US8 1419 aaKnown RBP35.47■■■■□ 3.27
HLA-C-208ENST00000487245 PPP4R2Q9NY27 417 aa35.47■■■■□ 3.27
HLA-C-208ENST00000487245 KANK1Q14678 1352 aa35.46■■■■□ 3.27
HLA-C-208ENST00000487245 TRPM2O94759 1503 aa35.46■■■■□ 3.27
HLA-C-208ENST00000487245 ADGRL1O94910 1474 aa35.46■■■■□ 3.27
HLA-C-208ENST00000487245 NBPF1Q3BBV0 1214 aa35.45■■■■□ 3.27
HLA-C-208ENST00000487245 PTPRTO14522 1441 aa35.45■■■■□ 3.26
HLA-C-208ENST00000487245 TET3O43151 1660 aa35.44■■■■□ 3.26
HLA-C-208ENST00000487245 SCAPERQ9BY12 1400 aa35.43■■■■□ 3.26
HLA-C-208ENST00000487245 RALBP1Q15311 655 aa35.43■■■■□ 3.26
HLA-C-208ENST00000487245 VWDEQ8N2E2 1590 aa35.41■■■■□ 3.26
HLA-C-208ENST00000487245 SPHKAPQ2M3C7 1700 aa35.4■■■■□ 3.26
HLA-C-208ENST00000487245 IRX6P78412 446 aaPredicted RBP35.39■■■■□ 3.26
HLA-C-208ENST00000487245 NPM1P06748 294 aaKnown RBP eCLIP35.38■■■■□ 3.25
HLA-C-208ENST00000487245 CEP152O94986 1710 aa35.37■■■■□ 3.25
HLA-C-208ENST00000487245 RNF17Q9BXT8 1623 aaKnown RBP35.37■■■■□ 3.25
HLA-C-208ENST00000487245 COL17A1Q9UMD9 1497 aaPredicted RBP35.37■■■■□ 3.25
HLA-C-208ENST00000487245 BRD4O60885 1362 aaPredicted RBP35.35■■■■□ 3.25
HLA-C-208ENST00000487245 PNISRQ8TF01 805 aaKnown RBP35.35■■■■□ 3.25
HLA-C-208ENST00000487245 MYBBP1AQ9BQG0 1328 aaKnown RBP35.34■■■■□ 3.25
HLA-C-208ENST00000487245 TMC1Q8TDI8 760 aa35.33■■■■□ 3.25
HLA-C-208ENST00000487245 ANP32EQ9BTT0 268 aa35.33■■■■□ 3.25
HLA-C-208ENST00000487245 NEURL4Q96JN8 1562 aa35.32■■■■□ 3.24
HLA-C-208ENST00000487245 LRPPRCP42704 1394 aaKnown RBP35.32■■■■□ 3.24
HLA-C-208ENST00000487245 TESK2Q96S53 571 aa35.31■■■■□ 3.24
HLA-C-208ENST00000487245 WASHC2CQ9Y4E1 1318 aa35.3■■■■□ 3.24
HLA-C-208ENST00000487245 MYT1LQ9UL68 1186 aa35.3■■■■□ 3.24
HLA-C-208ENST00000487245 MADDQ8WXG6 1647 aa35.29■■■■□ 3.24
HLA-C-208ENST00000487245 CFAP74Q9C0B2 1584 aa35.29■■■■□ 3.24
HLA-C-208ENST00000487245 KIF3BO15066 747 aa35.29■■■■□ 3.24
HLA-C-208ENST00000487245 NUDCQ9Y266 331 aa35.29■■■■□ 3.24
HLA-C-208ENST00000487245 CLTCL1P53675 1640 aa35.28■■■■□ 3.24
HLA-C-208ENST00000487245 RNF123Q5XPI4 1314 aa35.28■■■■□ 3.24
HLA-C-208ENST00000487245 TMF1P82094 1093 aa35.28■■■■□ 3.24
HLA-C-208ENST00000487245 ZNF518AQ6AHZ1 1483 aa35.26■■■■□ 3.24
HLA-C-208ENST00000487245 CNGB1Q14028 1251 aaPredicted RBP35.26■■■■□ 3.23
HLA-C-208ENST00000487245 KIDINS220Q9ULH0 1771 aa35.23■■■■□ 3.23
HLA-C-208ENST00000487245 MROH1Q8NDA8 1641 aa35.22■■■■□ 3.23
HLA-C-208ENST00000487245 PARD3Q8TEW0 1356 aa35.22■■■■□ 3.23
HLA-C-208ENST00000487245 DISP3Q9P2K9 1392 aa35.21■■■■□ 3.23
HLA-C-208ENST00000487245 PER1O15534 1290 aaPredicted RBP35.2■■■■□ 3.22
HLA-C-208ENST00000487245 IQGAP1P46940 1657 aa35.19■■■■□ 3.22
HLA-C-208ENST00000487245 CD109Q6YHK3 1445 aa35.17■■■■□ 3.22
HLA-C-208ENST00000487245 LMTK2Q8IWU2 1503 aa35.16■■■■□ 3.22
HLA-C-208ENST00000487245 NLRP13Q86W25 1043 aa35.16■■■■□ 3.22
HLA-C-208ENST00000487245 FANCIQ9NVI1 1328 aa35.16■■■■□ 3.22
HLA-C-208ENST00000487245 KIAA1210Q9ULL0 1709 aa35.16■■■■□ 3.22
HLA-C-208ENST00000487245 EFCAB6Q5THR3 1501 aa35.14■■■■□ 3.22
HLA-C-208ENST00000487245 SCAF11Q99590 1463 aaKnown RBP35.13■■■■□ 3.21
HLA-C-208ENST00000487245 CDCA8Q53HL2 280 aa35.11■■■■□ 3.21
HLA-C-208ENST00000487245 MLH3Q9UHC1 1453 aa35.1■■■■□ 3.21
HLA-C-208ENST00000487245 POGZQ7Z3K3 1410 aa35.1■■■■□ 3.21
HLA-C-208ENST00000487245 INSRP06213 1382 aa35.1■■■■□ 3.21
HLA-C-208ENST00000487245 ZMYM4Q5VZL5 1548 aa35.09■■■■□ 3.21
HLA-C-208ENST00000487245 PANK3Q9H999 370 aa35.07■■■■□ 3.21
HLA-C-208ENST00000487245 MYOM2P54296 1465 aa35.07■■■■□ 3.21
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms