RNA–Protein interactions for RNA: ENST00000487193.1

ATPAF1-205, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 5

Gene ATPAF1, Length 513 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-205ENST00000487193 DEPDC5O75140 1603 aa20.53■□□□□ 0.88
ATPAF1-205ENST00000487193 PLXNC1O60486 1568 aa20.53■□□□□ 0.88
ATPAF1-205ENST00000487193 ATP7AQ04656 1500 aa20.52■□□□□ 0.87
ATPAF1-205ENST00000487193 FAM135BQ49AJ0 1406 aa20.52■□□□□ 0.87
ATPAF1-205ENST00000487193 FAM135AQ9P2D6 1515 aa20.5■□□□□ 0.87
ATPAF1-205ENST00000487193 FMN1Q68DA7 1419 aa20.5■□□□□ 0.87
ATPAF1-205ENST00000487193 UGGT1Q9NYU2 1555 aa20.5■□□□□ 0.87
ATPAF1-205ENST00000487193 SRCAPQ6ZRS2 3230 aa20.49■□□□□ 0.87
ATPAF1-205ENST00000487193 SYCP2Q9BX26 1530 aa20.49■□□□□ 0.87
ATPAF1-205ENST00000487193 CDC42BPAQ5VT25 1732 aa20.49■□□□□ 0.87
ATPAF1-205ENST00000487193 LRRIQ1Q96JM4 1722 aa20.48■□□□□ 0.87
ATPAF1-205ENST00000487193 XIRP1Q702N8 1843 aaKnown RBP20.48■□□□□ 0.87
ATPAF1-205ENST00000487193 MIA2Q96PC5 1412 aa20.44■□□□□ 0.86
ATPAF1-205ENST00000487193 INO80Q9ULG1 1556 aaPredicted RBP20.43■□□□□ 0.86
ATPAF1-205ENST00000487193 ROBO1Q9Y6N7 1651 aa20.43■□□□□ 0.86
ATPAF1-205ENST00000487193 EHMT2Q96KQ7 1210 aa20.42■□□□□ 0.86
ATPAF1-205ENST00000487193 PZPP20742 1482 aa20.42■□□□□ 0.86
ATPAF1-205ENST00000487193 MEX3CQ5U5Q3 659 aaKnown RBP20.41■□□□□ 0.86
ATPAF1-205ENST00000487193 NLRP1Q9C000 1473 aa20.41■□□□□ 0.86
ATPAF1-205ENST00000487193 CHIC1Q5VXU3 224 aa20.4■□□□□ 0.86
ATPAF1-205ENST00000487193 ZNF772Q68DY9 489 aaPredicted RBP20.4■□□□□ 0.86
ATPAF1-205ENST00000487193 ADGBQ8N7X0 1667 aa20.4■□□□□ 0.86
ATPAF1-205ENST00000487193 WASHC2CQ9Y4E1 1318 aa20.4■□□□□ 0.86
ATPAF1-205ENST00000487193 RXRBP28702 533 aa20.39■□□□□ 0.85
ATPAF1-205ENST00000487193 KIF3BO15066 747 aa20.38■□□□□ 0.85
ATPAF1-205ENST00000487193 ZC3H13Q5T200 1668 aaKnown RBP20.38■□□□□ 0.85
ATPAF1-205ENST00000487193 JCADQ9P266 1359 aa20.36■□□□□ 0.85
ATPAF1-205ENST00000487193 RBM33Q96EV2 1170 aaKnown RBP20.36■□□□□ 0.85
ATPAF1-205ENST00000487193 PHLPP1O60346 1717 aa20.35■□□□□ 0.85
ATPAF1-205ENST00000487193 ARHGAP35Q9NRY4 1499 aa20.33■□□□□ 0.85
ATPAF1-205ENST00000487193 KDM5DQ9BY66 1539 aa20.32■□□□□ 0.84
ATPAF1-205ENST00000487193 CFDP1Q9UEE9 299 aaPredicted RBP20.32■□□□□ 0.84
ATPAF1-205ENST00000487193 KIAA1107Q9UPP5 1409 aa20.32■□□□□ 0.84
ATPAF1-205ENST00000487193 TMEM94Q12767 1356 aa20.32■□□□□ 0.84
ATPAF1-205ENST00000487193 DHX29Q7Z478 1369 aaKnown RBP20.32■□□□□ 0.84
ATPAF1-205ENST00000487193 GPATCH8Q9UKJ3 1502 aaKnown RBP20.32■□□□□ 0.84
ATPAF1-205ENST00000487193 UBTFP17480 764 aaKnown RBP20.31■□□□□ 0.84
ATPAF1-205ENST00000487193 LTKP29376 864 aa20.3■□□□□ 0.84
ATPAF1-205ENST00000487193 TXNDC2Q86VQ3 553 aa20.3■□□□□ 0.84
ATPAF1-205ENST00000487193 LRP6O75581 1613 aa20.3■□□□□ 0.84
ATPAF1-205ENST00000487193 PROSER2Q86WR7 435 aaPredicted RBP20.29■□□□□ 0.84
ATPAF1-205ENST00000487193 PLEKHH2Q8IVE3 1493 aa20.28■□□□□ 0.84
ATPAF1-205ENST00000487193 SCAF11Q99590 1463 aaKnown RBP20.27■□□□□ 0.84
ATPAF1-205ENST00000487193 ZRANB1Q9UGI0 708 aa20.26■□□□□ 0.83
ATPAF1-205ENST00000487193 SLAIN2Q9P270 581 aa20.25■□□□□ 0.83
ATPAF1-205ENST00000487193 NUTM2BA6NNL0 878 aaPredicted RBP20.24■□□□□ 0.83
ATPAF1-205ENST00000487193 NUTM2EB1AL46 878 aaPredicted RBP20.24■□□□□ 0.83
ATPAF1-205ENST00000487193 NUTM2DQ5VT03 806 aaPredicted RBP20.24■□□□□ 0.83
ATPAF1-205ENST00000487193 NUTM2AQ8IVF1 878 aaPredicted RBP20.24■□□□□ 0.83
ATPAF1-205ENST00000487193 EEA1Q15075 1411 aa20.24■□□□□ 0.83
ATPAF1-205ENST00000487193 SPATA31A6Q5VVP1 1343 aa20.24■□□□□ 0.83
ATPAF1-205ENST00000487193 ZNF644Q9H582 1327 aaPredicted RBP20.24■□□□□ 0.83
ATPAF1-205ENST00000487193 CCDC18Q5T9S5 1454 aa20.24■□□□□ 0.83
ATPAF1-205ENST00000487193 LRRC9Q6ZRR7 1453 aa20.23■□□□□ 0.83
ATPAF1-205ENST00000487193 CDK12Q9NYV4 1490 aaPredicted RBP20.21■□□□□ 0.83
ATPAF1-205ENST00000487193 UBR1Q8IWV7 1749 aa20.21■□□□□ 0.83
ATPAF1-205ENST00000487193 CFAP65Q6ZU64 1925 aaKnown RBP20.2■□□□□ 0.82
ATPAF1-205ENST00000487193 EID1Q9Y6B2 187 aa20.2■□□□□ 0.82
ATPAF1-205ENST00000487193 CCNB3Q8WWL7 1395 aa20.2■□□□□ 0.82
ATPAF1-205ENST00000487193 MAP3K1Q13233 1512 aa20.19■□□□□ 0.82
ATPAF1-205ENST00000487193 KCNA6P17658 529 aa20.19■□□□□ 0.82
ATPAF1-205ENST00000487193 SETBP1Q9Y6X0 1596 aa20.19■□□□□ 0.82
ATPAF1-205ENST00000487193 COL16A1Q07092 1604 aaPredicted RBP20.18■□□□□ 0.82
ATPAF1-205ENST00000487193 FOXD1Q16676 465 aa20.18■□□□□ 0.82
ATPAF1-205ENST00000487193 RTEL1-TNFRSF6BF6WH68 1400 aa20.18■□□□□ 0.82
ATPAF1-205ENST00000487193 MSH6P52701 1360 aa20.16■□□□□ 0.82
ATPAF1-205ENST00000487193 CASKIN1Q8WXD9 1431 aa20.16■□□□□ 0.82
ATPAF1-205ENST00000487193 AFF2P51816 1311 aa20.15■□□□□ 0.82
ATPAF1-205ENST00000487193 NCOA2Q15596 1464 aa20.15■□□□□ 0.82
ATPAF1-205ENST00000487193 SLC26A8Q96RN1 970 aa20.14■□□□□ 0.81
ATPAF1-205ENST00000487193 ERVK-7P63135 1459 aa20.13■□□□□ 0.81
ATPAF1-205ENST00000487193 ARHGAP23Q9P227 1491 aa20.13■□□□□ 0.81
ATPAF1-205ENST00000487193 RGS12O14924 1447 aa20.13■□□□□ 0.81
ATPAF1-205ENST00000487193 MBD5Q9P267 1494 aa20.12■□□□□ 0.81
ATPAF1-205ENST00000487193 FGD6Q6ZV73 1430 aa20.12■□□□□ 0.81
ATPAF1-205ENST00000487193 QTRT2Q9H974 415 aaKnown RBP20.12■□□□□ 0.81
ATPAF1-205ENST00000487193 SLIT1O75093 1534 aa20.12■□□□□ 0.81
ATPAF1-205ENST00000487193 PRDM15P57071 1507 aaPredicted RBP20.1■□□□□ 0.81
ATPAF1-205ENST00000487193 RBM6P78332 1123 aaKnown RBP20.09■□□□□ 0.81
ATPAF1-205ENST00000487193 SHPRHQ149N8 1683 aa20.08■□□□□ 0.81
ATPAF1-205ENST00000487193 TIAM1Q13009 1591 aa20.07■□□□□ 0.8
ATPAF1-205ENST00000487193 ABCC3O15438 1527 aa20.07■□□□□ 0.8
ATPAF1-205ENST00000487193 STAG3Q9UJ98 1225 aa20.06■□□□□ 0.8
ATPAF1-205ENST00000487193 ATAD2Q6PL18 1390 aa20.05■□□□□ 0.8
ATPAF1-205ENST00000487193 BCANQ96GW7 911 aa20.04■□□□□ 0.8
ATPAF1-205ENST00000487193 C8orf37Q96NL8 207 aa20.04■□□□□ 0.8
ATPAF1-205ENST00000487193 TMEM2Q9UHN6 1383 aa20.03■□□□□ 0.8
ATPAF1-205ENST00000487193 NKTRP30414 1462 aaKnown RBP20■□□□□ 0.79
ATPAF1-205ENST00000487193 C14orf37Q86TY3 774 aa20■□□□□ 0.79
ATPAF1-205ENST00000487193 CEP152O94986 1710 aa19.99■□□□□ 0.79
ATPAF1-205ENST00000487193 TET3O43151 1660 aa19.98■□□□□ 0.79
ATPAF1-205ENST00000487193 KDM5AP29375 1690 aaKnown RBP19.98■□□□□ 0.79
ATPAF1-205ENST00000487193 NGLY1Q96IV0 654 aa19.98■□□□□ 0.79
ATPAF1-205ENST00000487193 CCDC141Q6ZP82 1450 aa19.98■□□□□ 0.79
ATPAF1-205ENST00000487193 FYCO1Q9BQS8 1478 aa19.98■□□□□ 0.79
ATPAF1-205ENST00000487193 PIK3C2BO00750 1634 aa19.98■□□□□ 0.79
ATPAF1-205ENST00000487193 AHDC1Q5TGY3 1603 aaPredicted RBP19.98■□□□□ 0.79
ATPAF1-205ENST00000487193 MTUS2Q5JR59 1369 aa19.96■□□□□ 0.79
ATPAF1-205ENST00000487193 NWD1Q149M9 1564 aa19.95■□□□□ 0.78
ATPAF1-205ENST00000487193 TSPY4P0CV99 314 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms