RNA–Protein interactions for RNA: ENST00000487147.5

COL6A4P1-202, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

BASIC

Gene COL6A4P1, Length 4,317 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-202ENST00000487147 FANCD2Q9BXW9 1451 aa9.74□□□□□ -0.85
COL6A4P1-202ENST00000487147 MIA2Q96PC5 1412 aa9.74□□□□□ -0.85
COL6A4P1-202ENST00000487147 CENPJQ9HC77 1338 aaPredicted RBP9.74□□□□□ -0.85
COL6A4P1-202ENST00000487147 ANKRD30BQ9BXX2 1392 aa9.74□□□□□ -0.85
COL6A4P1-202ENST00000487147 MFAP1P55081 439 aaKnown RBP9.73□□□□□ -0.85
COL6A4P1-202ENST00000487147 CGNL1Q0VF96 1302 aa9.73□□□□□ -0.85
COL6A4P1-202ENST00000487147 MSNP26038 577 aaKnown RBP9.73□□□□□ -0.85
COL6A4P1-202ENST00000487147 AQRO60306 1485 aaKnown RBP eCLIP9.73□□□□□ -0.85
COL6A4P1-202ENST00000487147 COG6Q9Y2V7 657 aa9.73□□□□□ -0.85
COL6A4P1-202ENST00000487147 EHBP1L1Q8N3D4 1523 aa9.73□□□□□ -0.85
COL6A4P1-202ENST00000487147 GBP4Q96PP9 640 aa9.73□□□□□ -0.85
COL6A4P1-202ENST00000487147 ADAMTS8Q9UP79 889 aa9.72□□□□□ -0.85
COL6A4P1-202ENST00000487147 CLUAP1Q96AJ1 413 aa9.72□□□□□ -0.85
COL6A4P1-202ENST00000487147 APAF1O14727 1248 aa9.71□□□□□ -0.85
COL6A4P1-202ENST00000487147 E9PSI1 815 aa9.71□□□□□ -0.86
COL6A4P1-202ENST00000487147 SUPT6HQ7KZ85 1726 aaKnown RBP9.7□□□□□ -0.86
COL6A4P1-202ENST00000487147 WASHC2CQ9Y4E1 1318 aa9.7□□□□□ -0.86
COL6A4P1-202ENST00000487147 PDIA4P13667 645 aaKnown RBP9.7□□□□□ -0.86
COL6A4P1-202ENST00000487147 RPRD2Q5VT52 1461 aaKnown RBP9.7□□□□□ -0.86
COL6A4P1-202ENST00000487147 PTMAP06454 111 aaKnown RBP9.7□□□□□ -0.86
COL6A4P1-202ENST00000487147 BICRAQ9NZM4 1560 aa9.69□□□□□ -0.86
COL6A4P1-202ENST00000487147 RNF123Q5XPI4 1314 aa9.69□□□□□ -0.86
COL6A4P1-202ENST00000487147 DDX11L8A8MPP1 907 aa9.69□□□□□ -0.86
COL6A4P1-202ENST00000487147 CCDC144AA2RUR9 1427 aa9.69□□□□□ -0.86
COL6A4P1-202ENST00000487147 C20orf194Q5TEA3 1177 aa9.69□□□□□ -0.86
COL6A4P1-202ENST00000487147 POGKQ9P215 609 aa9.69□□□□□ -0.86
COL6A4P1-202ENST00000487147 KIAA1107Q9UPP5 1409 aa9.69□□□□□ -0.86
COL6A4P1-202ENST00000487147 DNTTIP2Q5QJE6 756 aaKnown RBP9.68□□□□□ -0.86
COL6A4P1-202ENST00000487147 HNRNPMP52272 730 aaKnown RBP eCLIP9.68□□□□□ -0.86
COL6A4P1-202ENST00000487147 MORC1Q86VD1 984 aa9.68□□□□□ -0.86
COL6A4P1-202ENST00000487147 CHMP5Q9NZZ3 219 aa9.68□□□□□ -0.86
COL6A4P1-202ENST00000487147 PTMSP20962 102 aa9.67□□□□□ -0.86
COL6A4P1-202ENST00000487147 BCL2L13Q9BXK5 485 aa9.67□□□□□ -0.86
COL6A4P1-202ENST00000487147 GAPVD1Q14C86 1478 aa9.67□□□□□ -0.86
COL6A4P1-202ENST00000487147 ANKRD50Q9ULJ7 1429 aa9.67□□□□□ -0.86
COL6A4P1-202ENST00000487147 EIF3AQ14152 1382 aaKnown RBP9.67□□□□□ -0.86
COL6A4P1-202ENST00000487147 HMGXB3Q12766 1538 aa9.66□□□□□ -0.86
COL6A4P1-202ENST00000487147 DAPK1P53355 1430 aa9.66□□□□□ -0.86
COL6A4P1-202ENST00000487147 MRE11P49959 708 aa9.66□□□□□ -0.86
COL6A4P1-202ENST00000487147 ITPRIPQ8IWB1 547 aa9.66□□□□□ -0.86
COL6A4P1-202ENST00000487147 PANK1Q8TE04 598 aa9.66□□□□□ -0.86
COL6A4P1-202ENST00000487147 U2SURPO15042 1029 aaKnown RBP9.65□□□□□ -0.86
COL6A4P1-202ENST00000487147 RRP7AQ9Y3A4 280 aaKnown RBP9.65□□□□□ -0.86
COL6A4P1-202ENST00000487147 ROCK1Q13464 1354 aa9.65□□□□□ -0.87
COL6A4P1-202ENST00000487147 TRAK2O60296 914 aa9.65□□□□□ -0.87
COL6A4P1-202ENST00000487147 NBPF1Q3BBV0 1214 aa9.65□□□□□ -0.87
COL6A4P1-202ENST00000487147 FOXD4L1Q9NU39 408 aa9.65□□□□□ -0.87
COL6A4P1-202ENST00000487147 BCAR3O75815 825 aa9.64□□□□□ -0.87
COL6A4P1-202ENST00000487147 UNC13AQ9UPW8 1703 aa9.64□□□□□ -0.87
COL6A4P1-202ENST00000487147 DHX29Q7Z478 1369 aaKnown RBP9.64□□□□□ -0.87
COL6A4P1-202ENST00000487147 SMC4Q9NTJ3 1288 aa9.63□□□□□ -0.87
COL6A4P1-202ENST00000487147 CFAP43Q8NDM7 1665 aa9.63□□□□□ -0.87
COL6A4P1-202ENST00000487147 PPP2R1AP30153 589 aa9.63□□□□□ -0.87
COL6A4P1-202ENST00000487147 ARID3AQ99856 593 aa9.63□□□□□ -0.87
COL6A4P1-202ENST00000487147 ZMYND15Q9H091 742 aa9.63□□□□□ -0.87
COL6A4P1-202ENST00000487147 U2AF1L5P0DN76 240 aaPredicted RBP9.63□□□□□ -0.87
COL6A4P1-202ENST00000487147 U2AF1Q01081 240 aaKnown RBP eCLIP9.63□□□□□ -0.87
COL6A4P1-202ENST00000487147 NGEFQ8N5V2 710 aa9.63□□□□□ -0.87
COL6A4P1-202ENST00000487147 C22orf23Q9BZE7 217 aa9.63□□□□□ -0.87
COL6A4P1-202ENST00000487147 SKOR2Q2VWA4 1001 aaPredicted RBP9.62□□□□□ -0.87
COL6A4P1-202ENST00000487147 CHMP4BQ9H444 224 aaKnown RBP9.62□□□□□ -0.87
COL6A4P1-202ENST00000487147 PDS5BQ9NTI5 1447 aa9.62□□□□□ -0.87
COL6A4P1-202ENST00000487147 POLA1P09884 1462 aaPredicted RBP9.62□□□□□ -0.87
COL6A4P1-202ENST00000487147 PDE3AQ14432 1141 aa9.62□□□□□ -0.87
COL6A4P1-202ENST00000487147 CASC1Q6TDU7 716 aa9.62□□□□□ -0.87
COL6A4P1-202ENST00000487147 IPO8O15397 1037 aaKnown RBP9.61□□□□□ -0.87
COL6A4P1-202ENST00000487147 CALD1Q05682 793 aaKnown RBP9.61□□□□□ -0.87
COL6A4P1-202ENST00000487147 MCM4P33991 863 aa9.61□□□□□ -0.87
COL6A4P1-202ENST00000487147 DDX49Q9Y6V7 483 aaKnown RBP9.61□□□□□ -0.87
COL6A4P1-202ENST00000487147 ZKSCAN2Q63HK3 967 aa9.6□□□□□ -0.87
COL6A4P1-202ENST00000487147 C8orf34Q49A92 452 aa9.6□□□□□ -0.87
COL6A4P1-202ENST00000487147 RSPH4AQ5TD94 716 aa9.6□□□□□ -0.87
COL6A4P1-202ENST00000487147 PDZRN3Q9UPQ7 1066 aa9.6□□□□□ -0.87
COL6A4P1-202ENST00000487147 ABCC5O15440 1437 aa9.6□□□□□ -0.87
COL6A4P1-202ENST00000487147 EPRSP07814 1512 aaKnown RBP9.6□□□□□ -0.87
COL6A4P1-202ENST00000487147 CARMIL2Q6F5E8 1435 aa9.59□□□□□ -0.87
COL6A4P1-202ENST00000487147 RRP9O43818 475 aaKnown RBP9.59□□□□□ -0.87
COL6A4P1-202ENST00000487147 SLFN5Q08AF3 891 aa9.59□□□□□ -0.87
COL6A4P1-202ENST00000487147 AAMPQ13685 434 aa9.59□□□□□ -0.87
COL6A4P1-202ENST00000487147 DUSP27Q5VZP5 1158 aa9.59□□□□□ -0.87
COL6A4P1-202ENST00000487147 CDK13Q14004 1512 aaKnown RBP9.59□□□□□ -0.87
COL6A4P1-202ENST00000487147 TPRNQ4KMQ1 711 aa9.59□□□□□ -0.87
COL6A4P1-202ENST00000487147 ABCA10Q8WWZ4 1543 aa9.59□□□□□ -0.88
COL6A4P1-202ENST00000487147 HECW1Q76N89 1606 aa9.59□□□□□ -0.88
COL6A4P1-202ENST00000487147 ESPNB1AK53 854 aa9.58□□□□□ -0.88
COL6A4P1-202ENST00000487147 PLCB2Q00722 1185 aa9.58□□□□□ -0.88
COL6A4P1-202ENST00000487147 GRPEL1Q9HAV7 217 aa9.58□□□□□ -0.88
COL6A4P1-202ENST00000487147 TOPBP1Q92547 1522 aa9.58□□□□□ -0.88
COL6A4P1-202ENST00000487147 LRPPRCP42704 1394 aaKnown RBP9.58□□□□□ -0.88
COL6A4P1-202ENST00000487147 ZBTB7CA1YPR0 619 aa9.58□□□□□ -0.88
COL6A4P1-202ENST00000487147 SENP3Q9H4L4 574 aaPredicted RBP9.58□□□□□ -0.88
COL6A4P1-202ENST00000487147 DZIP1LQ8IYY4 767 aaKnown RBP9.57□□□□□ -0.88
COL6A4P1-202ENST00000487147 PLEKHH2Q8IVE3 1493 aa9.57□□□□□ -0.88
COL6A4P1-202ENST00000487147 FAM13BQ9NYF5 915 aa9.57□□□□□ -0.88
COL6A4P1-202ENST00000487147 UGGT2Q9NYU1 1516 aa9.57□□□□□ -0.88
COL6A4P1-202ENST00000487147 CFAP44Q96MT7 982 aa9.56□□□□□ -0.88
COL6A4P1-202ENST00000487147 ISY1Q9ULR0 285 aaKnown RBP9.56□□□□□ -0.88
COL6A4P1-202ENST00000487147 TPM2P07951 284 aa9.56□□□□□ -0.88
COL6A4P1-202ENST00000487147 TBC1D2Q9BYX2 928 aa9.55□□□□□ -0.88
COL6A4P1-202ENST00000487147 PRDM2Q13029 1718 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms