RNA–Protein interactions for RNA: ENST00000486927.1

ATL2-215, Transcript of atlastin GTPase 2, humanhuman

TSL 4

Gene ATL2, Length 553 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL2-215ENST00000486927 TSPY10P0CW01 314 aa20.46■□□□□ 0.87
ATL2-215ENST00000486927 TIAM1Q13009 1591 aa20.46■□□□□ 0.87
ATL2-215ENST00000486927 MIA2Q96PC5 1412 aa20.45■□□□□ 0.86
ATL2-215ENST00000486927 TOM1O60784 492 aa20.45■□□□□ 0.86
ATL2-215ENST00000486927 MYO3AQ8NEV4 1616 aa20.44■□□□□ 0.86
ATL2-215ENST00000486927 ZNF142P52746 1687 aaPredicted RBP20.43■□□□□ 0.86
ATL2-215ENST00000486927 EHBP1L1Q8N3D4 1523 aa20.43■□□□□ 0.86
ATL2-215ENST00000486927 SPATA31D1Q6ZQQ2 1576 aa20.42■□□□□ 0.86
ATL2-215ENST00000486927 DNMT1P26358 1616 aaKnown RBP20.42■□□□□ 0.86
ATL2-215ENST00000486927 HSPA1LP34931 641 aa20.42■□□□□ 0.86
ATL2-215ENST00000486927 PZPP20742 1482 aa20.42■□□□□ 0.86
ATL2-215ENST00000486927 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.41■□□□□ 0.86
ATL2-215ENST00000486927 NCOA2Q15596 1464 aa20.41■□□□□ 0.86
ATL2-215ENST00000486927 CCDC141Q6ZP82 1450 aa20.41■□□□□ 0.86
ATL2-215ENST00000486927 ADGBQ8N7X0 1667 aa20.41■□□□□ 0.86
ATL2-215ENST00000486927 SHANK2Q9UPX8 1470 aa20.39■□□□□ 0.85
ATL2-215ENST00000486927 PIP4K2BP78356 416 aa20.39■□□□□ 0.85
ATL2-215ENST00000486927 CAMSAP2Q08AD1 1489 aa20.37■□□□□ 0.85
ATL2-215ENST00000486927 FAM135AQ9P2D6 1515 aa20.36■□□□□ 0.85
ATL2-215ENST00000486927 NLRP1Q9C000 1473 aa20.36■□□□□ 0.85
ATL2-215ENST00000486927 CPS1P31327 1500 aa20.35■□□□□ 0.85
ATL2-215ENST00000486927 KDM5DQ9BY66 1539 aa20.35■□□□□ 0.85
ATL2-215ENST00000486927 MED14O60244 1454 aa20.34■□□□□ 0.85
ATL2-215ENST00000486927 SCAF1Q9H7N4 1312 aaKnown RBP20.33■□□□□ 0.85
ATL2-215ENST00000486927 NPHP4O75161 1426 aaPredicted RBP20.32■□□□□ 0.84
ATL2-215ENST00000486927 NEURL4Q96JN8 1562 aa20.32■□□□□ 0.84
ATL2-215ENST00000486927 KANK4Q5T7N3 995 aaPredicted RBP20.31■□□□□ 0.84
ATL2-215ENST00000486927 ARHGEF5Q12774 1597 aa20.29■□□□□ 0.84
ATL2-215ENST00000486927 UGGT1Q9NYU2 1555 aa20.29■□□□□ 0.84
ATL2-215ENST00000486927 VWDEQ8N2E2 1590 aa20.27■□□□□ 0.84
ATL2-215ENST00000486927 LOC105371045A0A1W2PR82 267 aa20.27■□□□□ 0.84
ATL2-215ENST00000486927 LRRC9Q6ZRR7 1453 aa20.26■□□□□ 0.83
ATL2-215ENST00000486927 LTKP29376 864 aa20.24■□□□□ 0.83
ATL2-215ENST00000486927 ABCC3O15438 1527 aa20.22■□□□□ 0.83
ATL2-215ENST00000486927 VPS8Q8N3P4 1428 aa20.21■□□□□ 0.83
ATL2-215ENST00000486927 DEPDC5O75140 1603 aa20.21■□□□□ 0.83
ATL2-215ENST00000486927 TXNDC2Q86VQ3 553 aa20.21■□□□□ 0.83
ATL2-215ENST00000486927 LRRC7Q96NW7 1537 aa20.2■□□□□ 0.82
ATL2-215ENST00000486927 ALKQ9UM73 1620 aa20.2■□□□□ 0.82
ATL2-215ENST00000486927 MYOM3Q5VTT5 1437 aa20.19■□□□□ 0.82
ATL2-215ENST00000486927 ERVK-7P63135 1459 aa20.19■□□□□ 0.82
ATL2-215ENST00000486927 MAP3K1Q13233 1512 aa20.17■□□□□ 0.82
ATL2-215ENST00000486927 MAST1Q9Y2H9 1570 aa20.17■□□□□ 0.82
ATL2-215ENST00000486927 RRP7BPQ9NSQ0 103 aa20.17■□□□□ 0.82
ATL2-215ENST00000486927 ARHGAP31Q2M1Z3 1444 aa20.17■□□□□ 0.82
ATL2-215ENST00000486927 EID1Q9Y6B2 187 aa20.15■□□□□ 0.82
ATL2-215ENST00000486927 RNF17Q9BXT8 1623 aaKnown RBP20.15■□□□□ 0.82
ATL2-215ENST00000486927 POLR1AO95602 1720 aaPredicted RBP20.15■□□□□ 0.82
ATL2-215ENST00000486927 MED1Q15648 1581 aaPredicted RBP20.14■□□□□ 0.81
ATL2-215ENST00000486927 ARHGAP23Q9P227 1491 aa20.13■□□□□ 0.81
ATL2-215ENST00000486927 PHF23Q9BUL5 403 aaPredicted RBP20.13■□□□□ 0.81
ATL2-215ENST00000486927 ABCC5O15440 1437 aa20.12■□□□□ 0.81
ATL2-215ENST00000486927 DUOX2Q9NRD8 1548 aa20.12■□□□□ 0.81
ATL2-215ENST00000486927 SCAF11Q99590 1463 aaKnown RBP20.11■□□□□ 0.81
ATL2-215ENST00000486927 KIF15Q9NS87 1388 aa20.11■□□□□ 0.81
ATL2-215ENST00000486927 IDI1Q13907 227 aa20.11■□□□□ 0.81
ATL2-215ENST00000486927 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.11■□□□□ 0.812e-11■□□□□ 11.1
ATL2-215ENST00000486927 MROH1Q8NDA8 1641 aa20.11■□□□□ 0.81
ATL2-215ENST00000486927 RGS17Q9UGC6 210 aaPredicted RBP20.1■□□□□ 0.81
ATL2-215ENST00000486927 TMEM2Q9UHN6 1383 aa20.09■□□□□ 0.81
ATL2-215ENST00000486927 SLIT1O75093 1534 aa20.09■□□□□ 0.81
ATL2-215ENST00000486927 SENP3Q9H4L4 574 aaPredicted RBP20.09■□□□□ 0.81
ATL2-215ENST00000486927 IQGAP1P46940 1657 aa20.09■□□□□ 0.81
ATL2-215ENST00000486927 EIF2AK4Q9P2K8 1649 aaKnown RBP20.09■□□□□ 0.81
ATL2-215ENST00000486927 KCNA6P17658 529 aa20.07■□□□□ 0.8
ATL2-215ENST00000486927 ERBINQ96RT1 1412 aa20.07■□□□□ 0.8
ATL2-215ENST00000486927 STAG3Q9UJ98 1225 aa20.06■□□□□ 0.8
ATL2-215ENST00000486927 ZC3H13Q5T200 1668 aaKnown RBP20.06■□□□□ 0.8
ATL2-215ENST00000486927 FAM135BQ49AJ0 1406 aa20.05■□□□□ 0.8
ATL2-215ENST00000486927 STRCP1A6NGW2 1772 aa20.03■□□□□ 0.8
ATL2-215ENST00000486927 KANK1Q14678 1352 aa20.03■□□□□ 0.8
ATL2-215ENST00000486927 APLP2Q06481 763 aa20.02■□□□□ 0.8
ATL2-215ENST00000486927 SLC26A8Q96RN1 970 aa20.02■□□□□ 0.8
ATL2-215ENST00000486927 CHIC2Q9UKJ5 165 aa20.02■□□□□ 0.8
ATL2-215ENST00000486927 SLC52A1Q9NWF4 448 aa20.01■□□□□ 0.79
ATL2-215ENST00000486927 UBR1Q8IWV7 1749 aa20.01■□□□□ 0.79
ATL2-215ENST00000486927 DAPK1P53355 1430 aa20.01■□□□□ 0.79
ATL2-215ENST00000486927 TMEM94Q12767 1356 aa20■□□□□ 0.79
ATL2-215ENST00000486927 PROSER2Q86WR7 435 aaPredicted RBP20■□□□□ 0.79
ATL2-215ENST00000486927 PRDM15P57071 1507 aaPredicted RBP20■□□□□ 0.79
ATL2-215ENST00000486927 ANKRD30AQ9BXX3 1397 aa19.99■□□□□ 0.79
ATL2-215ENST00000486927 SYNMO15061 1565 aa19.98■□□□□ 0.79
ATL2-215ENST00000486927 LMTK2Q8IWU2 1503 aa19.97■□□□□ 0.79
ATL2-215ENST00000486927 NOS1P29475 1434 aa19.96■□□□□ 0.79
ATL2-215ENST00000486927 RBM33Q96EV2 1170 aaKnown RBP19.96■□□□□ 0.79
ATL2-215ENST00000486927 FGD6Q6ZV73 1430 aa19.95■□□□□ 0.78
ATL2-215ENST00000486927 TET3O43151 1660 aa19.94■□□□□ 0.78
ATL2-215ENST00000486927 POTEAQ6S8J7 498 aa19.93■□□□□ 0.78
ATL2-215ENST00000486927 SLAIN2Q9P270 581 aa19.93■□□□□ 0.78
ATL2-215ENST00000486927 CEP152O94986 1710 aa19.93■□□□□ 0.78
ATL2-215ENST00000486927 EFCAB6Q5THR3 1501 aa19.92■□□□□ 0.78
ATL2-215ENST00000486927 HDGFP51858 240 aaKnown RBP19.91■□□□□ 0.78
ATL2-215ENST00000486927 PTPN23Q9H3S7 1636 aa19.91■□□□□ 0.78
ATL2-215ENST00000486927 PIK3C2BO00750 1634 aa19.9■□□□□ 0.78
ATL2-215ENST00000486927 BCANQ96GW7 911 aa19.89■□□□□ 0.77
ATL2-215ENST00000486927 TBX22Q9Y458 520 aa19.89■□□□□ 0.77
ATL2-215ENST00000486927 CFAP65Q6ZU64 1925 aaKnown RBP19.88■□□□□ 0.77
ATL2-215ENST00000486927 KDM5AP29375 1690 aaKnown RBP19.84■□□□□ 0.77
ATL2-215ENST00000486927 PLEKHG1Q9ULL1 1385 aa19.84■□□□□ 0.77
ATL2-215ENST00000486927 ADGRL2O95490 1459 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms