RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 NEFLP07196 543 aa24.83■■□□□ 1.57
PDLIM7-207ENST00000486828 ARID4BQ4LE39 1312 aaPredicted RBP24.82■■□□□ 1.56
PDLIM7-207ENST00000486828 CCDC184Q52MB2 194 aa24.8■■□□□ 1.56
PDLIM7-207ENST00000486828 PLCH2O75038 1416 aa24.8■■□□□ 1.56
PDLIM7-207ENST00000486828 TRHP20396 242 aaPredicted RBP24.77■■□□□ 1.56
PDLIM7-207ENST00000486828 IQGAP3Q86VI3 1631 aa24.77■■□□□ 1.56
PDLIM7-207ENST00000486828 DUOX2Q9NRD8 1548 aa24.76■■□□□ 1.55
PDLIM7-207ENST00000486828 DHX29Q7Z478 1369 aaKnown RBP24.76■■□□□ 1.55
PDLIM7-207ENST00000486828 CARD11Q9BXL7 1154 aa24.75■■□□□ 1.55
PDLIM7-207ENST00000486828 BCANQ96GW7 911 aa24.74■■□□□ 1.55
PDLIM7-207ENST00000486828 MRS2Q9HD23 443 aa24.74■■□□□ 1.55
PDLIM7-207ENST00000486828 CCDC144AA2RUR9 1427 aa24.74■■□□□ 1.55
PDLIM7-207ENST00000486828 DCAF11Q8TEB1 546 aa24.74■■□□□ 1.55
PDLIM7-207ENST00000486828 ERBINQ96RT1 1412 aa24.72■■□□□ 1.55
PDLIM7-207ENST00000486828 MAGI2Q86UL8 1455 aa24.72■■□□□ 1.55
PDLIM7-207ENST00000486828 ABCA9Q8IUA7 1624 aa24.72■■□□□ 1.55
PDLIM7-207ENST00000486828 ROCK2O75116 1388 aaKnown RBP24.72■■□□□ 1.55
PDLIM7-207ENST00000486828 ABCC1P33527 1531 aa24.72■■□□□ 1.55
PDLIM7-207ENST00000486828 KDM2AQ9Y2K7 1162 aa24.72■■□□□ 1.55
PDLIM7-207ENST00000486828 EFCAB2Q5VUJ9 269 aa24.71■■□□□ 1.55
PDLIM7-207ENST00000486828 PLA2R1Q13018 1463 aa24.7■■□□□ 1.55
PDLIM7-207ENST00000486828 FAM69CQ0P6D2 419 aa24.7■■□□□ 1.54
PDLIM7-207ENST00000486828 DIP2BQ9P265 1576 aa24.69■■□□□ 1.54
PDLIM7-207ENST00000486828 TRPM1Q7Z4N2 1603 aa24.67■■□□□ 1.54
PDLIM7-207ENST00000486828 FAM9BQ8IZU0 186 aa24.67■■□□□ 1.54
PDLIM7-207ENST00000486828 PRAG1Q86YV5 1406 aa24.67■■□□□ 1.54
PDLIM7-207ENST00000486828 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.67■■□□□ 1.54
PDLIM7-207ENST00000486828 ARAP3Q8WWN8 1544 aa24.66■■□□□ 1.54
PDLIM7-207ENST00000486828 GLI2P10070 1586 aa24.66■■□□□ 1.54
PDLIM7-207ENST00000486828 POLR3GLQ9BT43 218 aa24.65■■□□□ 1.54
PDLIM7-207ENST00000486828 ATP10AO60312 1499 aa24.65■■□□□ 1.54
PDLIM7-207ENST00000486828 TSHZ2Q9NRE2 1034 aa24.65■■□□□ 1.54
PDLIM7-207ENST00000486828 KIF13AQ9H1H9 1805 aa24.64■■□□□ 1.54
PDLIM7-207ENST00000486828 CD109Q6YHK3 1445 aa24.64■■□□□ 1.53
PDLIM7-207ENST00000486828 TRAPPC8Q9Y2L5 1435 aa24.64■■□□□ 1.53
PDLIM7-207ENST00000486828 ST20-MTHFSA0A0A6YYL1 179 aa24.63■■□□□ 1.53
PDLIM7-207ENST00000486828 ZBED9Q6R2W3 1325 aa24.63■■□□□ 1.53
PDLIM7-207ENST00000486828 A2MP01023 1474 aa24.62■■□□□ 1.53
PDLIM7-207ENST00000486828 LAMC1P11047 1609 aa24.59■■□□□ 1.53
PDLIM7-207ENST00000486828 RTEL1-TNFRSF6BF6WH68 1400 aa24.59■■□□□ 1.53
PDLIM7-207ENST00000486828 MAP3K4Q9Y6R4 1608 aa24.59■■□□□ 1.53
PDLIM7-207ENST00000486828 GPRASP1Q5JY77 1395 aa24.59■■□□□ 1.53
PDLIM7-207ENST00000486828 E9PCH4 1651 aa24.58■■□□□ 1.53
PDLIM7-207ENST00000486828 EIF2AK4Q9P2K8 1649 aaKnown RBP24.56■■□□□ 1.52
PDLIM7-207ENST00000486828 RGL3Q3MIN7 710 aa24.56■■□□□ 1.52
PDLIM7-207ENST00000486828 ZFYVE16Q7Z3T8 1539 aa24.55■■□□□ 1.52
PDLIM7-207ENST00000486828 FANCAO15360 1455 aa24.54■■□□□ 1.52
PDLIM7-207ENST00000486828 SPAG9O60271 1321 aaKnown RBP24.54■■□□□ 1.52
PDLIM7-207ENST00000486828 PRDM15P57071 1507 aaPredicted RBP24.52■■□□□ 1.52
PDLIM7-207ENST00000486828 KTN1Q86UP2 1357 aaKnown RBP24.51■■□□□ 1.51
PDLIM7-207ENST00000486828 NBPF1Q3BBV0 1214 aa24.5■■□□□ 1.51
PDLIM7-207ENST00000486828 TSPOAP1O95153 1857 aa24.49■■□□□ 1.51
PDLIM7-207ENST00000486828 CNGB1Q14028 1251 aaPredicted RBP24.48■■□□□ 1.51
PDLIM7-207ENST00000486828 ERICH6BQ5W0A0 696 aa24.48■■□□□ 1.51
PDLIM7-207ENST00000486828 AFAP1Q8N556 730 aa24.48■■□□□ 1.51
PDLIM7-207ENST00000486828 DEPDC5O75140 1603 aa24.48■■□□□ 1.51
PDLIM7-207ENST00000486828 PPRC1Q5VV67 1664 aaKnown RBP24.47■■□□□ 1.51
PDLIM7-207ENST00000486828 INO80Q9ULG1 1556 aaPredicted RBP24.47■■□□□ 1.51
PDLIM7-207ENST00000486828 COL17A1Q9UMD9 1497 aaPredicted RBP24.45■■□□□ 1.5
PDLIM7-207ENST00000486828 CFAP74Q9C0B2 1584 aa24.44■■□□□ 1.5
PDLIM7-207ENST00000486828 TRPM2O94759 1503 aa24.44■■□□□ 1.5
PDLIM7-207ENST00000486828 ATP7AQ04656 1500 aa24.44■■□□□ 1.5
PDLIM7-207ENST00000486828 NEO1Q92859 1461 aa24.44■■□□□ 1.5
PDLIM7-207ENST00000486828 RNF17Q9BXT8 1623 aaKnown RBP24.44■■□□□ 1.5
PDLIM7-207ENST00000486828 RALBP1Q15311 655 aa24.44■■□□□ 1.5
PDLIM7-207ENST00000486828 PNISRQ8TF01 805 aaKnown RBP24.43■■□□□ 1.5
PDLIM7-207ENST00000486828 ADGRL1O94910 1474 aa24.42■■□□□ 1.5
PDLIM7-207ENST00000486828 MYBBP1AQ9BQG0 1328 aaKnown RBP24.42■■□□□ 1.5
PDLIM7-207ENST00000486828 IRX6P78412 446 aaPredicted RBP24.42■■□□□ 1.5
PDLIM7-207ENST00000486828 BRD4O60885 1362 aaPredicted RBP24.42■■□□□ 1.5
PDLIM7-207ENST00000486828 TMC1Q8TDI8 760 aa24.41■■□□□ 1.5
PDLIM7-207ENST00000486828 SPHKAPQ2M3C7 1700 aa24.4■■□□□ 1.5
PDLIM7-207ENST00000486828 PTPRTO14522 1441 aa24.4■■□□□ 1.5
PDLIM7-207ENST00000486828 TET3O43151 1660 aa24.4■■□□□ 1.5
PDLIM7-207ENST00000486828 TESK2Q96S53 571 aa24.4■■□□□ 1.5
PDLIM7-207ENST00000486828 SMG6Q86US8 1419 aaKnown RBP24.4■■□□□ 1.5
PDLIM7-207ENST00000486828 SCAPERQ9BY12 1400 aa24.39■■□□□ 1.5
PDLIM7-207ENST00000486828 VWDEQ8N2E2 1590 aa24.39■■□□□ 1.5
PDLIM7-207ENST00000486828 CEP152O94986 1710 aa24.39■■□□□ 1.49
PDLIM7-207ENST00000486828 MADDQ8WXG6 1647 aa24.38■■□□□ 1.49
PDLIM7-207ENST00000486828 LRPPRCP42704 1394 aaKnown RBP24.37■■□□□ 1.49
PDLIM7-207ENST00000486828 DISP3Q9P2K9 1392 aa24.36■■□□□ 1.49
PDLIM7-207ENST00000486828 CLTCL1P53675 1640 aa24.35■■□□□ 1.49
PDLIM7-207ENST00000486828 KANK1Q14678 1352 aa24.35■■□□□ 1.49
PDLIM7-207ENST00000486828 PARD3Q8TEW0 1356 aa24.35■■□□□ 1.49
PDLIM7-207ENST00000486828 STAC3Q96MF2 364 aa24.33■■□□□ 1.49
PDLIM7-207ENST00000486828 PPP4R2Q9NY27 417 aa24.33■■□□□ 1.49
PDLIM7-207ENST00000486828 PER1O15534 1290 aaPredicted RBP24.33■■□□□ 1.49
PDLIM7-207ENST00000486828 WASHC2CQ9Y4E1 1318 aa24.31■■□□□ 1.48
PDLIM7-207ENST00000486828 TMF1P82094 1093 aa24.31■■□□□ 1.48
PDLIM7-207ENST00000486828 NUDCQ9Y266 331 aa24.31■■□□□ 1.48
PDLIM7-207ENST00000486828 IQGAP1P46940 1657 aa24.31■■□□□ 1.48
PDLIM7-207ENST00000486828 POGZQ7Z3K3 1410 aa24.3■■□□□ 1.48
PDLIM7-207ENST00000486828 MROH1Q8NDA8 1641 aa24.3■■□□□ 1.48
PDLIM7-207ENST00000486828 NEURL4Q96JN8 1562 aa24.29■■□□□ 1.48
PDLIM7-207ENST00000486828 NLRP13Q86W25 1043 aa24.29■■□□□ 1.48
PDLIM7-207ENST00000486828 ZNF518AQ6AHZ1 1483 aa24.28■■□□□ 1.48
PDLIM7-207ENST00000486828 KIF3BO15066 747 aa24.27■■□□□ 1.48
PDLIM7-207ENST00000486828 RAPGEF3O95398 923 aa24.27■■□□□ 1.48
PDLIM7-207ENST00000486828 MYT1LQ9UL68 1186 aa24.25■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms