RNA–Protein interactions for RNA: ENST00000486690.6

LDHA-210, Transcript of lactate dehydrogenase A, humanhuman

TSL 5

Gene LDHA, Length 664 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-210ENST00000486690 SLC24A1O60721 1099 aa11.91□□□□□ -0.5
LDHA-210ENST00000486690 SPDYE1Q8NFV5 336 aaPredicted RBP11.9□□□□□ -0.5
LDHA-210ENST00000486690 KIAA1107Q9UPP5 1409 aa11.89□□□□□ -0.51
LDHA-210ENST00000486690 PROM2Q8N271 834 aa11.88□□□□□ -0.51
LDHA-210ENST00000486690 SYCP2Q9BX26 1530 aa11.87□□□□□ -0.51
LDHA-210ENST00000486690 HNRNPMP52272 730 aaKnown RBP eCLIP11.87□□□□□ -0.51
LDHA-210ENST00000486690 MROH2AA6NES4 1674 aa11.87□□□□□ -0.51
LDHA-210ENST00000486690 SOCS7O14512 581 aa11.86□□□□□ -0.51
LDHA-210ENST00000486690 CERKQ8TCT0 537 aa11.86□□□□□ -0.51
LDHA-210ENST00000486690 MYT1LQ9UL68 1186 aa11.86□□□□□ -0.51
LDHA-210ENST00000486690 PLXNC1O60486 1568 aa11.86□□□□□ -0.51
LDHA-210ENST00000486690 INO80Q9ULG1 1556 aaPredicted RBP11.86□□□□□ -0.51
LDHA-210ENST00000486690 UHRF1BP1Q6BDS2 1440 aa11.86□□□□□ -0.51
LDHA-210ENST00000486690 PLEKHH2Q8IVE3 1493 aa11.85□□□□□ -0.51
LDHA-210ENST00000486690 ATP7AQ04656 1500 aa11.85□□□□□ -0.51
LDHA-210ENST00000486690 CNTLNQ9NXG0 1405 aa11.85□□□□□ -0.51
LDHA-210ENST00000486690 SUPT6HQ7KZ85 1726 aaKnown RBP11.84□□□□□ -0.51
LDHA-210ENST00000486690 PITPNM1O00562 1244 aa11.84□□□□□ -0.51
LDHA-210ENST00000486690 CFDP1Q9UEE9 299 aaPredicted RBP11.84□□□□□ -0.51
LDHA-210ENST00000486690 ZNF777Q9ULD5 760 aaPredicted RBP11.84□□□□□ -0.51
LDHA-210ENST00000486690 SPAG9O60271 1321 aaKnown RBP11.84□□□□□ -0.51
LDHA-210ENST00000486690 TIAM1Q13009 1591 aa11.84□□□□□ -0.51
LDHA-210ENST00000486690 MBD5Q9P267 1494 aa11.83□□□□□ -0.52
LDHA-210ENST00000486690 CCNB3Q8WWL7 1395 aa11.82□□□□□ -0.52
LDHA-210ENST00000486690 STAG3Q9UJ98 1225 aa11.82□□□□□ -0.52
LDHA-210ENST00000486690 CLEC11AQ9Y240 323 aa11.82□□□□□ -0.52
LDHA-210ENST00000486690 PTPRTO14522 1441 aa11.82□□□□□ -0.52
LDHA-210ENST00000486690 NPATQ14207 1427 aa11.82□□□□□ -0.52
LDHA-210ENST00000486690 ZMYM3Q14202 1370 aa11.81□□□□□ -0.52
LDHA-210ENST00000486690 MTUS2Q5JR59 1369 aa11.81□□□□□ -0.52
LDHA-210ENST00000486690 CEP162Q5TB80 1403 aa11.81□□□□□ -0.52
LDHA-210ENST00000486690 A2MP01023 1474 aa11.81□□□□□ -0.52
LDHA-210ENST00000486690 ZNF644Q9H582 1327 aaPredicted RBP11.81□□□□□ -0.52
LDHA-210ENST00000486690 ADGBQ8N7X0 1667 aa11.81□□□□□ -0.52
LDHA-210ENST00000486690 EHBP1L1Q8N3D4 1523 aa11.81□□□□□ -0.52
LDHA-210ENST00000486690 CLTCQ00610 1675 aaKnown RBP11.8□□□□□ -0.52
LDHA-210ENST00000486690 RTEL1-TNFRSF6BF6WH68 1400 aa11.79□□□□□ -0.52
LDHA-210ENST00000486690 ESF1Q9H501 851 aaKnown RBP11.79□□□□□ -0.52
LDHA-210ENST00000486690 LTBP4Q8N2S1 1624 aa11.78□□□□□ -0.52
LDHA-210ENST00000486690 NCOA1Q15788 1441 aa11.78□□□□□ -0.52
LDHA-210ENST00000486690 PTPRKQ15262 1439 aa11.77□□□□□ -0.53
LDHA-210ENST00000486690 ZNF142P52746 1687 aaPredicted RBP11.76□□□□□ -0.53
LDHA-210ENST00000486690 DHX29Q7Z478 1369 aaKnown RBP11.76□□□□□ -0.53
LDHA-210ENST00000486690 NCOA2Q15596 1464 aa11.76□□□□□ -0.53
LDHA-210ENST00000486690 CAMSAP1Q5T5Y3 1602 aa11.75□□□□□ -0.53
LDHA-210ENST00000486690 RSPH4AQ5TD94 716 aa11.74□□□□□ -0.53
LDHA-210ENST00000486690 GGT6Q6P531 493 aa11.74□□□□□ -0.53
LDHA-210ENST00000486690 MYO3AQ8NEV4 1616 aa11.74□□□□□ -0.53
LDHA-210ENST00000486690 PRR29P0C7W0 189 aa11.73□□□□□ -0.53
LDHA-210ENST00000486690 ARHGEF5Q12774 1597 aa11.72□□□□□ -0.53
LDHA-210ENST00000486690 CEP170BQ9Y4F5 1589 aaPredicted RBP11.72□□□□□ -0.53
LDHA-210ENST00000486690 CAMSAP2Q08AD1 1489 aa11.72□□□□□ -0.53
LDHA-210ENST00000486690 PLA2R1Q13018 1463 aa11.72□□□□□ -0.53
LDHA-210ENST00000486690 TCOF1Q13428 1488 aaKnown RBP11.72□□□□□ -0.53
LDHA-210ENST00000486690 IQSEC2Q5JU85 1478 aa11.72□□□□□ -0.53
LDHA-210ENST00000486690 CCDC141Q6ZP82 1450 aa11.72□□□□□ -0.53
LDHA-210ENST00000486690 ILDR2Q71H61 639 aa11.72□□□□□ -0.53
LDHA-210ENST00000486690 FAM135AQ9P2D6 1515 aa11.7□□□□□ -0.54
LDHA-210ENST00000486690 HAX1O00165 279 aa11.7□□□□□ -0.54
LDHA-210ENST00000486690 MAP3K1Q13233 1512 aa11.7□□□□□ -0.54
LDHA-210ENST00000486690 LRRC9Q6ZRR7 1453 aa11.7□□□□□ -0.54
LDHA-210ENST00000486690 VPS8Q8N3P4 1428 aa11.69□□□□□ -0.54
LDHA-210ENST00000486690 NCKAP5LQ9HCH0 1330 aa11.69□□□□□ -0.54
LDHA-210ENST00000486690 DNMT1P26358 1616 aaKnown RBP11.69□□□□□ -0.54
LDHA-210ENST00000486690 FXR2P51116 673 aaKnown RBP eCLIP11.69□□□□□ -0.54
LDHA-210ENST00000486690 LOC105371045A0A1W2PR82 267 aa11.68□□□□□ -0.54
LDHA-210ENST00000486690 PKD2Q13563 968 aa11.68□□□□□ -0.54
LDHA-210ENST00000486690 A2ML1A8K2U0 1454 aa11.68□□□□□ -0.54
LDHA-210ENST00000486690 MAST1Q9Y2H9 1570 aa11.67□□□□□ -0.54
LDHA-210ENST00000486690 KIF3BO15066 747 aa11.67□□□□□ -0.54
LDHA-210ENST00000486690 PIP4P2Q8N4L2 257 aa11.67□□□□□ -0.54
LDHA-210ENST00000486690 KDM5DQ9BY66 1539 aa11.66□□□□□ -0.54
LDHA-210ENST00000486690 PZPP20742 1482 aa11.66□□□□□ -0.54
LDHA-210ENST00000486690 KANK4Q5T7N3 995 aaPredicted RBP11.66□□□□□ -0.54
LDHA-210ENST00000486690 FBXO31Q5XUX0 539 aaPredicted RBP11.66□□□□□ -0.54
LDHA-210ENST00000486690 FBXO3Q9UK99 471 aa11.66□□□□□ -0.54
LDHA-210ENST00000486690 RNF17Q9BXT8 1623 aaKnown RBP11.64□□□□□ -0.55
LDHA-210ENST00000486690 ZNF335Q9H4Z2 1342 aaPredicted RBP11.64□□□□□ -0.55
LDHA-210ENST00000486690 POLR1AO95602 1720 aaPredicted RBP11.64□□□□□ -0.55
LDHA-210ENST00000486690 MIA2Q96PC5 1412 aa11.64□□□□□ -0.55
LDHA-210ENST00000486690 TSPY4P0CV99 314 aa11.64□□□□□ -0.55
LDHA-210ENST00000486690 TSPY10P0CW01 314 aa11.64□□□□□ -0.55
LDHA-210ENST00000486690 NEURL4Q96JN8 1562 aa11.63□□□□□ -0.55
LDHA-210ENST00000486690 WASHC2CQ9Y4E1 1318 aa11.62□□□□□ -0.55
LDHA-210ENST00000486690 MROH1Q8NDA8 1641 aa11.62□□□□□ -0.55
LDHA-210ENST00000486690 EIF2AK4Q9P2K8 1649 aaKnown RBP11.62□□□□□ -0.55
LDHA-210ENST00000486690 TNRQ92752 1358 aa11.62□□□□□ -0.55
LDHA-210ENST00000486690 MYOM3Q5VTT5 1437 aa11.61□□□□□ -0.55
LDHA-210ENST00000486690 ZC3H13Q5T200 1668 aaKnown RBP11.61□□□□□ -0.55
LDHA-210ENST00000486690 MED14O60244 1454 aa11.6□□□□□ -0.55
LDHA-210ENST00000486690 NLRP1Q9C000 1473 aa11.6□□□□□ -0.55
LDHA-210ENST00000486690 ABCC3O15438 1527 aa11.6□□□□□ -0.55
LDHA-210ENST00000486690 SPATA31D1Q6ZQQ2 1576 aa11.59□□□□□ -0.55
LDHA-210ENST00000486690 DEPDC5O75140 1603 aa11.59□□□□□ -0.55
LDHA-210ENST00000486690 UGGT1Q9NYU2 1555 aa11.58□□□□□ -0.55
LDHA-210ENST00000486690 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.58□□□□□ -0.56
LDHA-210ENST00000486690 THEMISQ8N1K5 641 aaPredicted RBP11.58□□□□□ -0.56
LDHA-210ENST00000486690 CFAP65Q6ZU64 1925 aaKnown RBP11.58□□□□□ -0.56
LDHA-210ENST00000486690 VWDEQ8N2E2 1590 aa11.57□□□□□ -0.56
LDHA-210ENST00000486690 DUOX2Q9NRD8 1548 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms