RNA–Protein interactions for RNA: ENST00000486519.5

U2AF1-211, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 3

Gene U2AF1, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-211ENST00000486519 RNF17Q9BXT8 1623 aaKnown RBP25.55■■□□□ 1.68
U2AF1-211ENST00000486519 ADGBQ8N7X0 1667 aa25.52■■□□□ 1.68
U2AF1-211ENST00000486519 IQGAP1P46940 1657 aa25.52■■□□□ 1.68
U2AF1-211ENST00000486519 TNRQ92752 1358 aa25.51■■□□□ 1.67
U2AF1-211ENST00000486519 NPHP4O75161 1426 aaPredicted RBP25.51■■□□□ 1.67
U2AF1-211ENST00000486519 GPATCH8Q9UKJ3 1502 aaKnown RBP25.51■■□□□ 1.67
U2AF1-211ENST00000486519 DEPDC5O75140 1603 aa25.5■■□□□ 1.67
U2AF1-211ENST00000486519 MED14O60244 1454 aa25.49■■□□□ 1.67
U2AF1-211ENST00000486519 XIRP1Q702N8 1843 aaKnown RBP25.47■■□□□ 1.67
U2AF1-211ENST00000486519 SYNMO15061 1565 aa25.46■■□□□ 1.67
U2AF1-211ENST00000486519 UBTFP17480 764 aaKnown RBP25.45■■□□□ 1.66
U2AF1-211ENST00000486519 ANKLE2Q86XL3 938 aa25.45■■□□□ 1.66
U2AF1-211ENST00000486519 PZPP20742 1482 aa25.43■■□□□ 1.66
U2AF1-211ENST00000486519 CCDC18Q5T9S5 1454 aa25.43■■□□□ 1.66
U2AF1-211ENST00000486519 UGGT1Q9NYU2 1555 aa25.42■■□□□ 1.66
U2AF1-211ENST00000486519 KIAA1107Q9UPP5 1409 aa25.41■■□□□ 1.66
U2AF1-211ENST00000486519 ZC3H13Q5T200 1668 aaKnown RBP25.41■■□□□ 1.66
U2AF1-211ENST00000486519 CASKIN1Q8WXD9 1431 aa25.4■■□□□ 1.66
U2AF1-211ENST00000486519 KDM5DQ9BY66 1539 aa25.37■■□□□ 1.65
U2AF1-211ENST00000486519 MIA2Q96PC5 1412 aa25.35■■□□□ 1.65
U2AF1-211ENST00000486519 FAM135AQ9P2D6 1515 aa25.34■■□□□ 1.65
U2AF1-211ENST00000486519 THEMISQ8N1K5 641 aaPredicted RBP25.34■■□□□ 1.65
U2AF1-211ENST00000486519 ZNF644Q9H582 1327 aaPredicted RBP25.34■■□□□ 1.65
U2AF1-211ENST00000486519 PLEKHH2Q8IVE3 1493 aa25.34■■□□□ 1.65
U2AF1-211ENST00000486519 NLRP1Q9C000 1473 aa25.33■■□□□ 1.65
U2AF1-211ENST00000486519 CFDP1Q9UEE9 299 aaPredicted RBP25.31■■□□□ 1.64
U2AF1-211ENST00000486519 DHX29Q7Z478 1369 aaKnown RBP25.3■■□□□ 1.64
U2AF1-211ENST00000486519 MBD5Q9P267 1494 aa25.29■■□□□ 1.64
U2AF1-211ENST00000486519 KIF3BO15066 747 aa25.28■■□□□ 1.64
U2AF1-211ENST00000486519 ROBO1Q9Y6N7 1651 aa25.24■■□□□ 1.63
U2AF1-211ENST00000486519 FYCO1Q9BQS8 1478 aa25.23■■□□□ 1.63
U2AF1-211ENST00000486519 CCNB3Q8WWL7 1395 aa25.23■■□□□ 1.63
U2AF1-211ENST00000486519 TIAM1Q13009 1591 aa25.22■■□□□ 1.63
U2AF1-211ENST00000486519 WASHC2CQ9Y4E1 1318 aa25.22■■□□□ 1.63
U2AF1-211ENST00000486519 UBR1Q8IWV7 1749 aa25.22■■□□□ 1.63
U2AF1-211ENST00000486519 FAM135BQ49AJ0 1406 aa25.21■■□□□ 1.63
U2AF1-211ENST00000486519 RTEL1-TNFRSF6BF6WH68 1400 aa25.2■■□□□ 1.63
U2AF1-211ENST00000486519 CFAP65Q6ZU64 1925 aaKnown RBP25.2■■□□□ 1.62
U2AF1-211ENST00000486519 UPF1Q92900 1129 aaKnown RBP eCLIP25.18■■□□□ 1.62
U2AF1-211ENST00000486519 NCOA2Q15596 1464 aa25.15■■□□□ 1.62
U2AF1-211ENST00000486519 SCAF11Q99590 1463 aaKnown RBP25.15■■□□□ 1.62
U2AF1-211ENST00000486519 LTKP29376 864 aa25.15■■□□□ 1.62
U2AF1-211ENST00000486519 ERVK-7P63135 1459 aa25.14■■□□□ 1.61
U2AF1-211ENST00000486519 ABCC3O15438 1527 aa25.12■■□□□ 1.61
U2AF1-211ENST00000486519 MAP3K1Q13233 1512 aa25.12■■□□□ 1.61
U2AF1-211ENST00000486519 RBM33Q96EV2 1170 aaKnown RBP25.11■■□□□ 1.61
U2AF1-211ENST00000486519 PHLPP1O60346 1717 aa25.1■■□□□ 1.61
U2AF1-211ENST00000486519 CHIC1Q5VXU3 224 aa25.1■■□□□ 1.61
U2AF1-211ENST00000486519 CEP152O94986 1710 aa25.09■■□□□ 1.61
U2AF1-211ENST00000486519 ARHGAP23Q9P227 1491 aa25.09■■□□□ 1.61
U2AF1-211ENST00000486519 TMEM94Q12767 1356 aa25.07■■□□□ 1.6
U2AF1-211ENST00000486519 LRP6O75581 1613 aa25.07■■□□□ 1.6
U2AF1-211ENST00000486519 CCDC141Q6ZP82 1450 aa25.06■■□□□ 1.6
U2AF1-211ENST00000486519 SLIT1O75093 1534 aa25.06■■□□□ 1.6
U2AF1-211ENST00000486519 MROH1Q8NDA8 1641 aa25.05■■□□□ 1.6
U2AF1-211ENST00000486519 TRIM52Q96A61 297 aa25.05■■□□□ 1.6
U2AF1-211ENST00000486519 MTUS2Q5JR59 1369 aa25.04■■□□□ 1.6
U2AF1-211ENST00000486519 TXNDC2Q86VQ3 553 aa25.03■■□□□ 1.6
U2AF1-211ENST00000486519 CAMSAP2Q08AD1 1489 aa25.01■■□□□ 1.59
U2AF1-211ENST00000486519 SRCAPQ6ZRS2 3230 aa25■■□□□ 1.59
U2AF1-211ENST00000486519 COL16A1Q07092 1604 aaPredicted RBP25■■□□□ 1.59
U2AF1-211ENST00000486519 JCADQ9P266 1359 aa24.97■■□□□ 1.59
U2AF1-211ENST00000486519 PIK3C2BO00750 1634 aa24.97■■□□□ 1.59
U2AF1-211ENST00000486519 EHBP1L1Q8N3D4 1523 aa24.95■■□□□ 1.58
U2AF1-211ENST00000486519 LRRC9Q6ZRR7 1453 aa24.95■■□□□ 1.58
U2AF1-211ENST00000486519 PRDM15P57071 1507 aaPredicted RBP24.91■■□□□ 1.58
U2AF1-211ENST00000486519 PROSER2Q86WR7 435 aaPredicted RBP24.91■■□□□ 1.58
U2AF1-211ENST00000486519 TET3O43151 1660 aa24.91■■□□□ 1.58
U2AF1-211ENST00000486519 CEP162Q5TB80 1403 aa24.9■■□□□ 1.58
U2AF1-211ENST00000486519 ARHGEF5Q12774 1597 aa24.89■■□□□ 1.58
U2AF1-211ENST00000486519 NWD1Q149M9 1564 aa24.89■■□□□ 1.58
U2AF1-211ENST00000486519 KCNA6P17658 529 aa24.89■■□□□ 1.58
U2AF1-211ENST00000486519 EIF2AK4Q9P2K8 1649 aaKnown RBP24.89■■□□□ 1.57
U2AF1-211ENST00000486519 SLC26A8Q96RN1 970 aa24.88■■□□□ 1.57
U2AF1-211ENST00000486519 TMEM2Q9UHN6 1383 aa24.87■■□□□ 1.57
U2AF1-211ENST00000486519 SLAIN2Q9P270 581 aa24.86■■□□□ 1.57
U2AF1-211ENST00000486519 EID1Q9Y6B2 187 aa24.85■■□□□ 1.57
U2AF1-211ENST00000486519 SHPRHQ149N8 1683 aa24.84■■□□□ 1.57
U2AF1-211ENST00000486519 KDM5AP29375 1690 aaKnown RBP24.83■■□□□ 1.57
U2AF1-211ENST00000486519 MEX3CQ5U5Q3 659 aaKnown RBP24.83■■□□□ 1.57
U2AF1-211ENST00000486519 ZNF772Q68DY9 489 aaPredicted RBP24.83■■□□□ 1.57
U2AF1-211ENST00000486519 NKTRP30414 1462 aaKnown RBP24.82■■□□□ 1.56
U2AF1-211ENST00000486519 MSH6P52701 1360 aa24.81■■□□□ 1.56
U2AF1-211ENST00000486519 MAST1Q9Y2H9 1570 aa24.81■■□□□ 1.56
U2AF1-211ENST00000486519 RXRBP28702 533 aa24.8■■□□□ 1.56
U2AF1-211ENST00000486519 SPATA31A6Q5VVP1 1343 aa24.79■■□□□ 1.56
U2AF1-211ENST00000486519 EFCAB6Q5THR3 1501 aa24.78■■□□□ 1.56
U2AF1-211ENST00000486519 RSPH4AQ5TD94 716 aa24.78■■□□□ 1.56
U2AF1-211ENST00000486519 CDK12Q9NYV4 1490 aaPredicted RBP24.77■■□□□ 1.56
U2AF1-211ENST00000486519 FGD6Q6ZV73 1430 aa24.77■■□□□ 1.56
U2AF1-211ENST00000486519 TSPY4P0CV99 314 aa24.76■■□□□ 1.55
U2AF1-211ENST00000486519 TSPY10P0CW01 314 aa24.76■■□□□ 1.55
U2AF1-211ENST00000486519 CHD2O14647 1828 aaKnown RBP24.76■■□□□ 1.55
U2AF1-211ENST00000486519 RGS12O14924 1447 aa24.76■■□□□ 1.55
U2AF1-211ENST00000486519 ARHGAP31Q2M1Z3 1444 aa24.76■■□□□ 1.55
U2AF1-211ENST00000486519 AHDC1Q5TGY3 1603 aaPredicted RBP24.75■■□□□ 1.55
U2AF1-211ENST00000486519 DIP2AQ14689 1571 aa24.75■■□□□ 1.55
U2AF1-211ENST00000486519 NUTM2BA6NNL0 878 aaPredicted RBP24.7■■□□□ 1.54
U2AF1-211ENST00000486519 NUTM2EB1AL46 878 aaPredicted RBP24.7■■□□□ 1.54
U2AF1-211ENST00000486519 IDI1Q13907 227 aa24.7■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms