RNA–Protein interactions for RNA: ENST00000486361.5

LIMK1-206, Transcript of LIM domain kinase 1, humanhuman

TSL 4

Gene LIMK1, Length 569 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-206ENST00000486361 NCOA1Q15788 1441 aa30.3■■■□□ 2.44
LIMK1-206ENST00000486361 WASHC2CQ9Y4E1 1318 aa30.27■■■□□ 2.44
LIMK1-206ENST00000486361 HSPA2P54652 639 aa30.25■■■□□ 2.43
LIMK1-206ENST00000486361 LMTK3Q96Q04 1460 aa30.25■■■□□ 2.43
LIMK1-206ENST00000486361 ADGRL2O95490 1459 aa30.24■■■□□ 2.43
LIMK1-206ENST00000486361 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.22■■■□□ 2.43
LIMK1-206ENST00000486361 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.22■■■□□ 2.43
LIMK1-206ENST00000486361 MROH2AA6NES4 1674 aa30.22■■■□□ 2.43
LIMK1-206ENST00000486361 ERBINQ96RT1 1412 aa30.22■■■□□ 2.43
LIMK1-206ENST00000486361 RRBP1Q9P2E9 1410 aaKnown RBP30.22■■■□□ 2.43
LIMK1-206ENST00000486361 EIF2AK4Q9P2K8 1649 aaKnown RBP30.21■■■□□ 2.43
LIMK1-206ENST00000486361 RNF17Q9BXT8 1623 aaKnown RBP30.18■■■□□ 2.42
LIMK1-206ENST00000486361 KDM5DQ9BY66 1539 aa30.18■■■□□ 2.42
LIMK1-206ENST00000486361 FBXO31Q5XUX0 539 aaPredicted RBP30.17■■■□□ 2.42
LIMK1-206ENST00000486361 MROH1Q8NDA8 1641 aa30.15■■■□□ 2.42
LIMK1-206ENST00000486361 UHRF1BP1Q6BDS2 1440 aa30.13■■■□□ 2.41
LIMK1-206ENST00000486361 ANKRD50Q9ULJ7 1429 aa30.13■■■□□ 2.41
LIMK1-206ENST00000486361 SETD1BQ9UPS6 1966 aaKnown RBP30.12■■■□□ 2.41
LIMK1-206ENST00000486361 PREX1Q8TCU6 1659 aa30.12■■■□□ 2.41
LIMK1-206ENST00000486361 NPATQ14207 1427 aa30.12■■■□□ 2.41
LIMK1-206ENST00000486361 ABCC3O15438 1527 aa30.12■■■□□ 2.41
LIMK1-206ENST00000486361 ROCK1Q13464 1354 aa30.11■■■□□ 2.41
LIMK1-206ENST00000486361 FAM135AQ9P2D6 1515 aa30.09■■■□□ 2.41
LIMK1-206ENST00000486361 PZPP20742 1482 aa30.06■■■□□ 2.4
LIMK1-206ENST00000486361 CEP152O94986 1710 aa30.05■■■□□ 2.4
LIMK1-206ENST00000486361 KANK1Q14678 1352 aa30.04■■■□□ 2.4
LIMK1-206ENST00000486361 PRDM15P57071 1507 aaPredicted RBP30.04■■■□□ 2.4
LIMK1-206ENST00000486361 DEPDC5O75140 1603 aa30.03■■■□□ 2.4
LIMK1-206ENST00000486361 TNRQ92752 1358 aa30.02■■■□□ 2.4
LIMK1-206ENST00000486361 ZC3H13Q5T200 1668 aaKnown RBP30.01■■■□□ 2.39
LIMK1-206ENST00000486361 CAMSAP1Q5T5Y3 1602 aa29.98■■■□□ 2.39
LIMK1-206ENST00000486361 MYO3AQ8NEV4 1616 aa29.95■■■□□ 2.38
LIMK1-206ENST00000486361 VWDEQ8N2E2 1590 aa29.94■■■□□ 2.38
LIMK1-206ENST00000486361 CFAP65Q6ZU64 1925 aaKnown RBP29.94■■■□□ 2.38
LIMK1-206ENST00000486361 ERVK-7P63135 1459 aa29.92■■■□□ 2.38
LIMK1-206ENST00000486361 CEP170BQ9Y4F5 1589 aaPredicted RBP29.9■■■□□ 2.38
LIMK1-206ENST00000486361 ARHGAP31Q2M1Z3 1444 aa29.9■■■□□ 2.38
LIMK1-206ENST00000486361 LMTK2Q8IWU2 1503 aa29.9■■■□□ 2.38
LIMK1-206ENST00000486361 NAIPQ13075 1403 aa29.88■■■□□ 2.37
LIMK1-206ENST00000486361 A2ML1A8K2U0 1454 aa29.88■■■□□ 2.37
LIMK1-206ENST00000486361 SPATA31D1Q6ZQQ2 1576 aa29.88■■■□□ 2.37
LIMK1-206ENST00000486361 NUP155O75694 1391 aa29.87■■■□□ 2.37
LIMK1-206ENST00000486361 UNC13BO14795 1591 aa29.86■■■□□ 2.37
LIMK1-206ENST00000486361 NCKAP5LQ9HCH0 1330 aa29.85■■■□□ 2.37
LIMK1-206ENST00000486361 ZNF142P52746 1687 aaPredicted RBP29.85■■■□□ 2.37
LIMK1-206ENST00000486361 STRCQ7RTU9 1775 aa29.84■■■□□ 2.37
LIMK1-206ENST00000486361 NLRP1Q9C000 1473 aa29.81■■■□□ 2.36
LIMK1-206ENST00000486361 EFCAB6Q5THR3 1501 aa29.81■■■□□ 2.36
LIMK1-206ENST00000486361 HFM1A2PYH4 1435 aa29.8■■■□□ 2.36
LIMK1-206ENST00000486361 THEMISQ8N1K5 641 aaPredicted RBP29.77■■■□□ 2.36
LIMK1-206ENST00000486361 DMRT2Q9Y5R5 561 aa29.77■■■□□ 2.36
LIMK1-206ENST00000486361 GCC2Q8IWJ2 1684 aa29.76■■■□□ 2.36
LIMK1-206ENST00000486361 UGGT1Q9NYU2 1555 aa29.76■■■□□ 2.35
LIMK1-206ENST00000486361 TET3O43151 1660 aa29.76■■■□□ 2.35
LIMK1-206ENST00000486361 TRIM52Q96A61 297 aa29.75■■■□□ 2.35
LIMK1-206ENST00000486361 IQGAP3Q86VI3 1631 aa29.74■■■□□ 2.35
LIMK1-206ENST00000486361 IDI1Q13907 227 aa29.74■■■□□ 2.35
LIMK1-206ENST00000486361 NOS1P29475 1434 aa29.73■■■□□ 2.35
LIMK1-206ENST00000486361 PKD2Q13563 968 aa29.72■■■□□ 2.35
LIMK1-206ENST00000486361 PLA2R1Q13018 1463 aa29.72■■■□□ 2.35
LIMK1-206ENST00000486361 SYNMO15061 1565 aa29.7■■■□□ 2.35
LIMK1-206ENST00000486361 RPRD2Q5VT52 1461 aaKnown RBP29.69■■■□□ 2.34
LIMK1-206ENST00000486361 STAG3Q9UJ98 1225 aa29.69■■■□□ 2.34
LIMK1-206ENST00000486361 E9PCH4 1651 aa29.68■■■□□ 2.34
LIMK1-206ENST00000486361 PTPRTO14522 1441 aa29.68■■■□□ 2.34
LIMK1-206ENST00000486361 ANKLE2Q86XL3 938 aa29.67■■■□□ 2.34
LIMK1-206ENST00000486361 PIK3C2BO00750 1634 aa29.65■■■□□ 2.34
LIMK1-206ENST00000486361 SLC52A1Q9NWF4 448 aa29.65■■■□□ 2.34
LIMK1-206ENST00000486361 UBR1Q8IWV7 1749 aa29.63■■■□□ 2.33
LIMK1-206ENST00000486361 SLC4A1APQ9BWU0 796 aaKnown RBP29.59■■■□□ 2.33
LIMK1-206ENST00000486361 CHGAP10645 457 aaKnown RBP29.58■■■□□ 2.33
LIMK1-206ENST00000486361 LTKP29376 864 aa29.58■■■□□ 2.33
LIMK1-206ENST00000486361 SETD5Q9C0A6 1442 aa29.58■■■□□ 2.33
LIMK1-206ENST00000486361 TXNDC2Q86VQ3 553 aa29.57■■■□□ 2.32
LIMK1-206ENST00000486361 NEURL4Q96JN8 1562 aa29.56■■■□□ 2.32
LIMK1-206ENST00000486361 POLR1AO95602 1720 aaPredicted RBP29.54■■■□□ 2.32
LIMK1-206ENST00000486361 TMEM2Q9UHN6 1383 aa29.53■■■□□ 2.32
LIMK1-206ENST00000486361 NPHP4O75161 1426 aaPredicted RBP29.53■■■□□ 2.32
LIMK1-206ENST00000486361 ARHGAP23Q9P227 1491 aa29.52■■■□□ 2.32
LIMK1-206ENST00000486361 ZNF335Q9H4Z2 1342 aaPredicted RBP29.51■■■□□ 2.32
LIMK1-206ENST00000486361 FOXD1Q16676 465 aa29.51■■■□□ 2.31
LIMK1-206ENST00000486361 EID1Q9Y6B2 187 aa29.51■■■□□ 2.31
LIMK1-206ENST00000486361 ADGRB3O60242 1522 aa29.5■■■□□ 2.31
LIMK1-206ENST00000486361 SLIT1O75093 1534 aa29.5■■■□□ 2.31
LIMK1-206ENST00000486361 RAB3GAP2Q9H2M9 1393 aa29.5■■■□□ 2.31
LIMK1-206ENST00000486361 CERKQ8TCT0 537 aa29.49■■■□□ 2.31
LIMK1-206ENST00000486361 MPHOSPH9Q99550 1183 aa29.49■■■□□ 2.31
LIMK1-206ENST00000486361 SCAF11Q99590 1463 aaKnown RBP29.48■■■□□ 2.31
LIMK1-206ENST00000486361 MED14O60244 1454 aa29.48■■■□□ 2.31
LIMK1-206ENST00000486361 SENP3Q9H4L4 574 aaPredicted RBP29.47■■■□□ 2.31
LIMK1-206ENST00000486361 KDM5AP29375 1690 aaKnown RBP29.45■■■□□ 2.31
LIMK1-206ENST00000486361 SPHKAPQ2M3C7 1700 aa29.45■■■□□ 2.3
LIMK1-206ENST00000486361 TMEM131LA2VDJ0 1609 aa29.44■■■□□ 2.3
LIMK1-206ENST00000486361 NUTM2DQ5VT03 806 aaPredicted RBP29.43■■■□□ 2.3
LIMK1-206ENST00000486361 MYO5BQ9ULV0 1848 aa29.43■■■□□ 2.3
LIMK1-206ENST00000486361 LTBP4Q8N2S1 1624 aa29.42■■■□□ 2.3
LIMK1-206ENST00000486361 IQGAP1P46940 1657 aa29.4■■■□□ 2.3
LIMK1-206ENST00000486361 RIMS2Q9UQ26 1411 aa29.39■■■□□ 2.3
LIMK1-206ENST00000486361 ILDR1Q86SU0 546 aaPredicted RBP29.39■■■□□ 2.3
LIMK1-206ENST00000486361 BCANQ96GW7 911 aa29.38■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms