RNA–Protein interactions for RNA: ENST00000486100.1

PRPF40A-209, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-209ENST00000486100 DAPK1P53355 1430 aa28.54■■■□□ 2.16
PRPF40A-209ENST00000486100 RRP7BPQ9NSQ0 103 aa28.54■■■□□ 2.16
PRPF40A-209ENST00000486100 KDM5DQ9BY66 1539 aa28.53■■■□□ 2.16
PRPF40A-209ENST00000486100 FBXO31Q5XUX0 539 aaPredicted RBP28.53■■■□□ 2.16
PRPF40A-209ENST00000486100 KIF15Q9NS87 1388 aa28.51■■■□□ 2.16
PRPF40A-209ENST00000486100 DUOX2Q9NRD8 1548 aa28.51■■■□□ 2.15
PRPF40A-209ENST00000486100 STRCQ7RTU9 1775 aa28.5■■■□□ 2.15
PRPF40A-209ENST00000486100 FBXO41Q8TF61 875 aa28.5■■■□□ 2.15
PRPF40A-209ENST00000486100 CHIC2Q9UKJ5 165 aa28.49■■■□□ 2.15
PRPF40A-209ENST00000486100 PZPP20742 1482 aa28.48■■■□□ 2.15
PRPF40A-209ENST00000486100 PTPRTO14522 1441 aa28.48■■■□□ 2.15
PRPF40A-209ENST00000486100 NCOA1Q15788 1441 aa28.48■■■□□ 2.15
PRPF40A-209ENST00000486100 FAM50AQ14320 339 aaKnown RBP28.47■■■□□ 2.15
PRPF40A-209ENST00000486100 DNMT1P26358 1616 aaKnown RBP28.47■■■□□ 2.15
PRPF40A-209ENST00000486100 TNRQ92752 1358 aa28.46■■■□□ 2.15
PRPF40A-209ENST00000486100 RNF17Q9BXT8 1623 aaKnown RBP28.45■■■□□ 2.14
PRPF40A-209ENST00000486100 EIF2AK4Q9P2K8 1649 aaKnown RBP28.45■■■□□ 2.14
PRPF40A-209ENST00000486100 ANKRD30AQ9BXX3 1397 aa28.45■■■□□ 2.14
PRPF40A-209ENST00000486100 CERKQ8TCT0 537 aa28.44■■■□□ 2.14
PRPF40A-209ENST00000486100 CAMSAP1Q5T5Y3 1602 aa28.43■■■□□ 2.14
PRPF40A-209ENST00000486100 MYO3AQ8NEV4 1616 aa28.43■■■□□ 2.14
PRPF40A-209ENST00000486100 ERBINQ96RT1 1412 aa28.43■■■□□ 2.14
PRPF40A-209ENST00000486100 NCKAP5LQ9HCH0 1330 aa28.42■■■□□ 2.14
PRPF40A-209ENST00000486100 CROCC2H7BZ55 1655 aa28.42■■■□□ 2.14
PRPF40A-209ENST00000486100 CEP170BQ9Y4F5 1589 aaPredicted RBP28.41■■■□□ 2.14
PRPF40A-209ENST00000486100 A2ML1A8K2U0 1454 aa28.41■■■□□ 2.14
PRPF40A-209ENST00000486100 PKD2Q13563 968 aa28.41■■■□□ 2.14
PRPF40A-209ENST00000486100 ABCC3O15438 1527 aa28.4■■■□□ 2.14
PRPF40A-209ENST00000486100 PLA2R1Q13018 1463 aa28.39■■■□□ 2.13
PRPF40A-209ENST00000486100 ZNF142P52746 1687 aaPredicted RBP28.38■■■□□ 2.13
PRPF40A-209ENST00000486100 MROH1Q8NDA8 1641 aa28.36■■■□□ 2.13
PRPF40A-209ENST00000486100 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.36■■■□□ 2.139e-15■■■□□ 15.8
PRPF40A-209ENST00000486100 ZC3H13Q5T200 1668 aaKnown RBP28.33■■■□□ 2.13
PRPF40A-209ENST00000486100 PPARGC1BQ86YN6 1023 aaKnown RBP28.33■■■□□ 2.13
PRPF40A-209ENST00000486100 ADGRL2O95490 1459 aa28.33■■■□□ 2.13
PRPF40A-209ENST00000486100 THEMISQ8N1K5 641 aaPredicted RBP28.32■■■□□ 2.12
PRPF40A-209ENST00000486100 NLRP1Q9C000 1473 aa28.32■■■□□ 2.12
PRPF40A-209ENST00000486100 KANK1Q14678 1352 aa28.3■■■□□ 2.12
PRPF40A-209ENST00000486100 PRDM15P57071 1507 aaPredicted RBP28.29■■■□□ 2.12
PRPF40A-209ENST00000486100 ARHGAP31Q2M1Z3 1444 aa28.28■■■□□ 2.12
PRPF40A-209ENST00000486100 ERVK-7P63135 1459 aa28.27■■■□□ 2.12
PRPF40A-209ENST00000486100 SPATA31D1Q6ZQQ2 1576 aa28.27■■■□□ 2.12
PRPF40A-209ENST00000486100 ANKLE2Q86XL3 938 aa28.25■■■□□ 2.11
PRPF40A-209ENST00000486100 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.24■■■□□ 2.11
PRPF40A-209ENST00000486100 ANKRD50Q9ULJ7 1429 aa28.23■■■□□ 2.11
PRPF40A-209ENST00000486100 UGGT1Q9NYU2 1555 aa28.23■■■□□ 2.11
PRPF40A-209ENST00000486100 DEPDC5O75140 1603 aa28.22■■■□□ 2.11
PRPF40A-209ENST00000486100 CEP152O94986 1710 aa28.22■■■□□ 2.11
PRPF40A-209ENST00000486100 LTBP4Q8N2S1 1624 aa28.19■■■□□ 2.1
PRPF40A-209ENST00000486100 ZNF335Q9H4Z2 1342 aaPredicted RBP28.18■■■□□ 2.1
PRPF40A-209ENST00000486100 LMTK2Q8IWU2 1503 aa28.18■■■□□ 2.1
PRPF40A-209ENST00000486100 ROCK1Q13464 1354 aa28.18■■■□□ 2.1
PRPF40A-209ENST00000486100 VWDEQ8N2E2 1590 aa28.17■■■□□ 2.1
PRPF40A-209ENST00000486100 ITGAEP38570 1179 aa28.16■■■□□ 2.1
PRPF40A-209ENST00000486100 NEURL4Q96JN8 1562 aa28.1■■■□□ 2.09
PRPF40A-209ENST00000486100 CFAP65Q6ZU64 1925 aaKnown RBP28.09■■■□□ 2.09
PRPF40A-209ENST00000486100 MED14O60244 1454 aa28.08■■■□□ 2.09
PRPF40A-209ENST00000486100 IDI1Q13907 227 aa28.08■■■□□ 2.09
PRPF40A-209ENST00000486100 NPHP4O75161 1426 aaPredicted RBP28.08■■■□□ 2.09
PRPF40A-209ENST00000486100 IQSEC2Q5JU85 1478 aa28.08■■■□□ 2.09
PRPF40A-209ENST00000486100 NOS1P29475 1434 aa28.05■■■□□ 2.08
PRPF40A-209ENST00000486100 STAG3Q9UJ98 1225 aa28.05■■■□□ 2.08
PRPF40A-209ENST00000486100 POLR1AO95602 1720 aaPredicted RBP28.04■■■□□ 2.08
PRPF40A-209ENST00000486100 EFCAB6Q5THR3 1501 aa28.04■■■□□ 2.08
PRPF40A-209ENST00000486100 RRBP1Q9P2E9 1410 aaKnown RBP28.04■■■□□ 2.08
PRPF40A-209ENST00000486100 TXNDC2Q86VQ3 553 aa28.03■■■□□ 2.08
PRPF40A-209ENST00000486100 SLC52A1Q9NWF4 448 aa28.03■■■□□ 2.08
PRPF40A-209ENST00000486100 LTKP29376 864 aa28.02■■■□□ 2.08
PRPF40A-209ENST00000486100 UBR1Q8IWV7 1749 aa28.01■■■□□ 2.07
PRPF40A-209ENST00000486100 RPRD2Q5VT52 1461 aaKnown RBP28.01■■■□□ 2.07
PRPF40A-209ENST00000486100 EID1Q9Y6B2 187 aa28■■■□□ 2.07
PRPF40A-209ENST00000486100 ARHGAP23Q9P227 1491 aa28■■■□□ 2.07
PRPF40A-209ENST00000486100 SLIT1O75093 1534 aa27.98■■■□□ 2.07
PRPF40A-209ENST00000486100 TMEM2Q9UHN6 1383 aa27.98■■■□□ 2.07
PRPF40A-209ENST00000486100 SCAF11Q99590 1463 aaKnown RBP27.97■■■□□ 2.07
PRPF40A-209ENST00000486100 UNC13BO14795 1591 aa27.96■■■□□ 2.07
PRPF40A-209ENST00000486100 NUP155O75694 1391 aa27.96■■■□□ 2.07
PRPF40A-209ENST00000486100 PIK3C2BO00750 1634 aa27.96■■■□□ 2.07
PRPF40A-209ENST00000486100 SYNMO15061 1565 aa27.95■■■□□ 2.07
PRPF40A-209ENST00000486100 UBAP1LF5GYI3 381 aa27.93■■■□□ 2.06
PRPF40A-209ENST00000486100 TET3O43151 1660 aa27.93■■■□□ 2.06
PRPF40A-209ENST00000486100 CPS1P31327 1500 aa27.92■■■□□ 2.06
PRPF40A-209ENST00000486100 IQGAP1P46940 1657 aa27.92■■■□□ 2.06
PRPF40A-209ENST00000486100 KDM5AP29375 1690 aaKnown RBP27.88■■■□□ 2.05
PRPF40A-209ENST00000486100 IQGAP3Q86VI3 1631 aa27.85■■■□□ 2.05
PRPF40A-209ENST00000486100 GCC2Q8IWJ2 1684 aa27.84■■■□□ 2.05
PRPF40A-209ENST00000486100 ADGRB3O60242 1522 aa27.84■■■□□ 2.05
PRPF40A-209ENST00000486100 NAIPQ13075 1403 aa27.84■■■□□ 2.05
PRPF40A-209ENST00000486100 HDGFP51858 240 aaKnown RBP27.82■■■□□ 2.04
PRPF40A-209ENST00000486100 TOM1O60784 492 aa27.81■■■□□ 2.04
PRPF40A-209ENST00000486100 CHGAP10645 457 aaKnown RBP27.8■■■□□ 2.04
PRPF40A-209ENST00000486100 E9PCH4 1651 aa27.8■■■□□ 2.04
PRPF40A-209ENST00000486100 SLC26A8Q96RN1 970 aa27.77■■■□□ 2.04
PRPF40A-209ENST00000486100 LRRC7Q96NW7 1537 aa27.76■■■□□ 2.03
PRPF40A-209ENST00000486100 BCANQ96GW7 911 aa27.75■■■□□ 2.03
PRPF40A-209ENST00000486100 HFM1A2PYH4 1435 aa27.75■■■□□ 2.03
PRPF40A-209ENST00000486100 ZFYVE9O95405 1425 aa27.75■■■□□ 2.03
PRPF40A-209ENST00000486100 RIMS2Q9UQ26 1411 aa27.75■■■□□ 2.03
PRPF40A-209ENST00000486100 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.74■■■□□ 2.03
PRPF40A-209ENST00000486100 PPP1R15AO75807 674 aaPredicted RBP27.73■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms