RNA–Protein interactions for RNA: ENST00000485963.5

PI4KA-215, Transcript of phosphatidylinositol 4-kinase alpha, human

TSL 2

Gene PI4KA, Length 2,301 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PI4KA-215	ENST00000485963	TSPY10	P0CW01	314 aa		32.67	■■■□□ 2.82
PI4KA-215	ENST00000485963	AFAP1	Q8N556	730 aa		32.66	■■■□□ 2.82
PI4KA-215	ENST00000485963	SHANK2	Q9UPX8	1470 aa		32.66	■■■□□ 2.82
PI4KA-215	ENST00000485963	SPATA31E1	Q6ZUB1	1445 aa		32.65	■■■□□ 2.82
PI4KA-215	ENST00000485963	RICTOR	Q6R327	1708 aa		32.65	■■■□□ 2.82
PI4KA-215	ENST00000485963	POGZ	Q7Z3K3	1410 aa		32.65	■■■□□ 2.82
PI4KA-215	ENST00000485963	C9orf84	Q5VXU9	1444 aa		32.64	■■■□□ 2.82
PI4KA-215	ENST00000485963	PRKRIP1	Q9H875	184 aa	Predicted RBP	32.64	■■■□□ 2.82
PI4KA-215	ENST00000485963	ZNF518A	Q6AHZ1	1483 aa		32.64	■■■□□ 2.82
PI4KA-215	ENST00000485963	KIF7	Q2M1P5	1343 aa		32.61	■■■□□ 2.81
PI4KA-215	ENST00000485963	MAST1	Q9Y2H9	1570 aa		32.61	■■■□□ 2.81
PI4KA-215	ENST00000485963	RAPGEF3	O95398	923 aa		32.61	■■■□□ 2.81
PI4KA-215	ENST00000485963	ADGRL2	O95490	1459 aa		32.59	■■■□□ 2.81
PI4KA-215	ENST00000485963	PKD2	Q13563	968 aa		32.59	■■■□□ 2.81
PI4KA-215	ENST00000485963	KDM5C	P41229	1560 aa		32.58	■■■□□ 2.81
PI4KA-215	ENST00000485963	FRMPD1	Q5SYB0	1578 aa		32.58	■■■□□ 2.81
PI4KA-215	ENST00000485963	SPAG9	O60271	1321 aa	Known RBP	32.57	■■■□□ 2.81
PI4KA-215	ENST00000485963	ANKRD30A	Q9BXX3	1397 aa		32.56	■■■□□ 2.8
PI4KA-215	ENST00000485963	INO80	Q9ULG1	1556 aa	Predicted RBP	32.54	■■■□□ 2.8
PI4KA-215	ENST00000485963	MYT1L	Q9UL68	1186 aa		32.54	■■■□□ 2.8
PI4KA-215	ENST00000485963	ZFYVE16	Q7Z3T8	1539 aa		32.54	■■■□□ 2.8
PI4KA-215	ENST00000485963	COL17A1	Q9UMD9	1497 aa	Predicted RBP	32.54	■■■□□ 2.8
PI4KA-215	ENST00000485963	ATP7A	Q04656	1500 aa		32.53	■■■□□ 2.8
PI4KA-215	ENST00000485963	ANKRD50	Q9ULJ7	1429 aa		32.53	■■■□□ 2.8
PI4KA-215	ENST00000485963	HECW2	Q9P2P5	1572 aa		32.52	■■■□□ 2.8
PI4KA-215	ENST00000485963	FAM9B	Q8IZU0	186 aa		32.52	■■■□□ 2.8
PI4KA-215	ENST00000485963	ZNF326	Q5BKZ1	582 aa	Known RBP	32.51	■■■□□ 2.8
PI4KA-215	ENST00000485963	KIDINS220	Q9ULH0	1771 aa		32.51	■■■□□ 2.8
PI4KA-215	ENST00000485963	MRS2	Q9HD23	443 aa		32.5	■■■□□ 2.79
PI4KA-215	ENST00000485963	IRX6	P78412	446 aa	Predicted RBP	32.49	■■■□□ 2.79
PI4KA-215	ENST00000485963	RTEL1-TNFRSF6B	F6WH68	1400 aa		32.49	■■■□□ 2.79
PI4KA-215	ENST00000485963	PLXNC1	O60486	1568 aa		32.49	■■■□□ 2.79
PI4KA-215	ENST00000485963	MLH3	Q9UHC1	1453 aa		32.46	■■■□□ 2.79
PI4KA-215	ENST00000485963	ZMYM4	Q5VZL5	1548 aa		32.46	■■■□□ 2.79
PI4KA-215	ENST00000485963	KIF15	Q9NS87	1388 aa		32.44	■■■□□ 2.78
PI4KA-215	ENST00000485963	POLR1A	O95602	1720 aa	Predicted RBP	32.43	■■■□□ 2.78
PI4KA-215	ENST00000485963	NUP155	O75694	1391 aa		32.43	■■■□□ 2.78
PI4KA-215	ENST00000485963	USP47	Q96K76	1375 aa		32.41	■■■□□ 2.78
PI4KA-215	ENST00000485963	ABCA6	Q8N139	1617 aa		32.4	■■■□□ 2.78
PI4KA-215	ENST00000485963	POLR3GL	Q9BT43	218 aa		32.37	■■■□□ 2.77
PI4KA-215	ENST00000485963	BCORL1	Q5H9F3	1711 aa		32.36	■■■□□ 2.77
PI4KA-215	ENST00000485963	DUOX2	Q9NRD8	1548 aa		32.36	■■■□□ 2.77
PI4KA-215	ENST00000485963	CNGB1	Q14028	1251 aa	Predicted RBP	32.35	■■■□□ 2.77
PI4KA-215	ENST00000485963	YEATS2	Q9ULM3	1422 aa		32.35	■■■□□ 2.77
PI4KA-215	ENST00000485963	RBM19	Q9Y4C8	960 aa	Known RBP	32.35	■■■□□ 2.77
PI4KA-215	ENST00000485963	MAGI2	Q86UL8	1455 aa		32.35	■■■□□ 2.77
PI4KA-215	ENST00000485963	DIP2C	Q9Y2E4	1556 aa		32.34	■■■□□ 2.77
PI4KA-215	ENST00000485963	DHX29	Q7Z478	1369 aa	Known RBP	32.33	■■■□□ 2.77
PI4KA-215	ENST00000485963	ZBED9	Q6R2W3	1325 aa		32.3	■■■□□ 2.76
PI4KA-215	ENST00000485963	A2M	P01023	1474 aa		32.27	■■■□□ 2.76
PI4KA-215	ENST00000485963	ARHGEF40	Q8TER5	1519 aa		32.27	■■■□□ 2.76
PI4KA-215	ENST00000485963	KDM2A	Q9Y2K7	1162 aa		32.26	■■■□□ 2.76
PI4KA-215	ENST00000485963	UHRF1BP1	Q6BDS2	1440 aa		32.26	■■■□□ 2.75
PI4KA-215	ENST00000485963	ERBIN	Q96RT1	1412 aa		32.26	■■■□□ 2.75
PI4KA-215	ENST00000485963	CARD11	Q9BXL7	1154 aa		32.23	■■■□□ 2.75
PI4KA-215	ENST00000485963	KDM5D	Q9BY66	1539 aa		32.22	■■■□□ 2.75
PI4KA-215	ENST00000485963	ATP10A	O60312	1499 aa		32.22	■■■□□ 2.75
PI4KA-215	ENST00000485963	RALGAPB	Q86X10	1494 aa		32.21	■■■□□ 2.75
PI4KA-215	ENST00000485963	EIF2AK4	Q9P2K8	1649 aa	Known RBP	32.2	■■■□□ 2.74
PI4KA-215	ENST00000485963	DCAF11	Q8TEB1	546 aa		32.19	■■■□□ 2.74
PI4KA-215	ENST00000485963	ARID4B	Q4LE39	1312 aa	Predicted RBP	32.18	■■■□□ 2.74
PI4KA-215	ENST00000485963	ANP32E	Q9BTT0	268 aa		32.17	■■■□□ 2.74
PI4KA-215	ENST00000485963	ST20-MTHFS	A0A0A6YYL1	179 aa		32.15	■■■□□ 2.74
PI4KA-215	ENST00000485963	RERE	Q9P2R6	1566 aa		32.15	■■■□□ 2.74
PI4KA-215	ENST00000485963	ERICH6B	Q5W0A0	696 aa		32.14	■■■□□ 2.74
PI4KA-215	ENST00000485963	KIF3B	O15066	747 aa		32.13	■■■□□ 2.73
PI4KA-215	ENST00000485963	SIGLEC1	Q9BZZ2	1709 aa		32.12	■■■□□ 2.73
PI4KA-215	ENST00000485963	PPP4R2	Q9NY27	417 aa		32.12	■■■□□ 2.73
PI4KA-215	ENST00000485963	UNC13B	O14795	1591 aa		32.12	■■■□□ 2.73
PI4KA-215	ENST00000485963	DEPDC5	O75140	1603 aa		32.09	■■■□□ 2.73
PI4KA-215	ENST00000485963	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	32.08	■■■□□ 2.73	9e-7	■□□□□ 8.9
PI4KA-215	ENST00000485963	FAM135A	Q9P2D6	1515 aa		32.08	■■■□□ 2.73
PI4KA-215	ENST00000485963	RNF17	Q9BXT8	1623 aa	Known RBP	32.06	■■■□□ 2.72
PI4KA-215	ENST00000485963	ROCK2	O75116	1388 aa	Known RBP	32.06	■■■□□ 2.72
PI4KA-215	ENST00000485963	SENP3-EIF4A1	A0A087X0R7	540 aa		32.06	■■■□□ 2.72
PI4KA-215	ENST00000485963	AGL	P35573	1532 aa		32.03	■■■□□ 2.72
PI4KA-215	ENST00000485963	MROH1	Q8NDA8	1641 aa		32.03	■■■□□ 2.72
PI4KA-215	ENST00000485963	PNISR	Q8TF01	805 aa	Known RBP	32.02	■■■□□ 2.72
PI4KA-215	ENST00000485963	B4GALNT3	Q6L9W6	998 aa		32.01	■■■□□ 2.72
PI4KA-215	ENST00000485963	GGT6	Q6P531	493 aa		32	■■■□□ 2.71
PI4KA-215	ENST00000485963	RGL3	Q3MIN7	710 aa		32	■■■□□ 2.71
PI4KA-215	ENST00000485963	PRDM15	P57071	1507 aa	Predicted RBP	32	■■■□□ 2.71
PI4KA-215	ENST00000485963	IQGAP3	Q86VI3	1631 aa		31.99	■■■□□ 2.71
PI4KA-215	ENST00000485963	TMC1	Q8TDI8	760 aa		31.99	■■■□□ 2.71
PI4KA-215	ENST00000485963	SMG6	Q86US8	1419 aa	Known RBP	31.97	■■■□□ 2.71
PI4KA-215	ENST00000485963	CCDC144A	A2RUR9	1427 aa		31.97	■■■□□ 2.71
PI4KA-215	ENST00000485963	KANK1	Q14678	1352 aa		31.95	■■■□□ 2.71
PI4KA-215	ENST00000485963	PLA2R1	Q13018	1463 aa		31.94	■■■□□ 2.7
PI4KA-215	ENST00000485963	CEP152	O94986	1710 aa		31.94	■■■□□ 2.7
PI4KA-215	ENST00000485963	NBPF1	Q3BBV0	1214 aa		31.94	■■■□□ 2.7
PI4KA-215	ENST00000485963	PRAG1	Q86YV5	1406 aa		31.93	■■■□□ 2.7
PI4KA-215	ENST00000485963	NUDC	Q9Y266	331 aa		31.93	■■■□□ 2.7
PI4KA-215	ENST00000485963	VWDE	Q8N2E2	1590 aa		31.92	■■■□□ 2.7
PI4KA-215	ENST00000485963	MLEC	Q14165	292 aa		31.92	■■■□□ 2.7
PI4KA-215	ENST00000485963	MSH5	O43196	834 aa		31.89	■■■□□ 2.7
PI4KA-215	ENST00000485963	TRPM1	Q7Z4N2	1603 aa		31.87	■■■□□ 2.69
PI4KA-215	ENST00000485963	TET3	O43151	1660 aa		31.86	■■■□□ 2.69
PI4KA-215	ENST00000485963	MYBBP1A	Q9BQG0	1328 aa	Known RBP	31.86	■■■□□ 2.69
PI4KA-215	ENST00000485963	ZC3H13	Q5T200	1668 aa	Known RBP	31.85	■■■□□ 2.69
PI4KA-215	ENST00000485963	WASHC2C	Q9Y4E1	1318 aa		31.85	■■■□□ 2.69

Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms