RNA–Protein interactions for RNA: ENST00000485737.1

SMARCC1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 631 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-206ENST00000485737 KIF21BO75037 1637 aa7.05□□□□□ -1.28
SMARCC1-206ENST00000485737 WDR70Q9NW82 654 aa7.04□□□□□ -1.28
SMARCC1-206ENST00000485737 EMILIN3Q9NT22 766 aa7.03□□□□□ -1.28
SMARCC1-206ENST00000485737 GTF3C3Q9Y5Q9 886 aa7.03□□□□□ -1.28
SMARCC1-206ENST00000485737 PEG3Q9GZU2 1588 aa7.03□□□□□ -1.28
SMARCC1-206ENST00000485737 SOGA1O94964 1423 aa7.02□□□□□ -1.29
SMARCC1-206ENST00000485737 TSHZ2Q9NRE2 1034 aa7.02□□□□□ -1.29
SMARCC1-206ENST00000485737 BAZ1BQ9UIG0 1483 aaKnown RBP7.01□□□□□ -1.29
SMARCC1-206ENST00000485737 CEP164Q9UPV0 1460 aa7.01□□□□□ -1.29
SMARCC1-206ENST00000485737 EVI5O60447 810 aa7.01□□□□□ -1.29
SMARCC1-206ENST00000485737 HCSTQ9UBK5 93 aa7.01□□□□□ -1.29
SMARCC1-206ENST00000485737 KDM4FA0A1W2PPD8 638 aa7□□□□□ -1.29
SMARCC1-206ENST00000485737 PPP4R3BQ5MIZ7 849 aa7□□□□□ -1.29
SMARCC1-206ENST00000485737 AXIN2Q9Y2T1 843 aa7□□□□□ -1.29
SMARCC1-206ENST00000485737 DPYSL4O14531 572 aa6.99□□□□□ -1.29
SMARCC1-206ENST00000485737 LSM11P83369 360 aaKnown RBP eCLIP6.99□□□□□ -1.295e-12■■■□□ 15.9
SMARCC1-206ENST00000485737 ANKRD13DQ6ZTN6 518 aa6.99□□□□□ -1.29
SMARCC1-206ENST00000485737 ZNF454Q8N9F8 522 aa6.99□□□□□ -1.29
SMARCC1-206ENST00000485737 RGS20O76081 388 aa6.98□□□□□ -1.29
SMARCC1-206ENST00000485737 PLCB2Q00722 1185 aa6.98□□□□□ -1.29
SMARCC1-206ENST00000485737 CAMK2BQ13554 666 aa6.98□□□□□ -1.29
SMARCC1-206ENST00000485737 VPS8Q8N3P4 1428 aa6.98□□□□□ -1.29
SMARCC1-206ENST00000485737 CLSPNQ9HAW4 1339 aa6.98□□□□□ -1.29
SMARCC1-206ENST00000485737 E2F4Q16254 413 aa6.97□□□□□ -1.29
SMARCC1-206ENST00000485737 RUSC2Q8N2Y8 1516 aa6.96□□□□□ -1.3
SMARCC1-206ENST00000485737 POTEEQ6S8J3 1075 aa6.95□□□□□ -1.3
SMARCC1-206ENST00000485737 KCNH8Q96L42 1107 aa6.95□□□□□ -1.3
SMARCC1-206ENST00000485737 KCNK17Q96T54 332 aa6.95□□□□□ -1.3
SMARCC1-206ENST00000485737 UNC13AQ9UPW8 1703 aa6.95□□□□□ -1.3
SMARCC1-206ENST00000485737 SYNJ1O43426 1573 aa6.95□□□□□ -1.3
SMARCC1-206ENST00000485737 CLIP1P30622 1438 aa6.94□□□□□ -1.3
SMARCC1-206ENST00000485737 ARHGAP33O14559 1287 aa6.94□□□□□ -1.3
SMARCC1-206ENST00000485737 PSEN2P49810 448 aa6.94□□□□□ -1.3
SMARCC1-206ENST00000485737 HAP1P54257 671 aaPredicted RBP6.94□□□□□ -1.3
SMARCC1-206ENST00000485737 ANO8Q9HCE9 1232 aaPredicted RBP6.94□□□□□ -1.3
SMARCC1-206ENST00000485737 FOSBP53539 338 aa6.93□□□□□ -1.3
SMARCC1-206ENST00000485737 JPH4Q96JJ6 628 aa6.93□□□□□ -1.3
SMARCC1-206ENST00000485737 TK2O00142 265 aa6.92□□□□□ -1.3
SMARCC1-206ENST00000485737 ERICH3Q5RHP9 1530 aa6.91□□□□□ -1.3
SMARCC1-206ENST00000485737 DMRTA1Q5VZB9 504 aa6.91□□□□□ -1.3
SMARCC1-206ENST00000485737 DDX12PQ92771 950 aa6.91□□□□□ -1.3
SMARCC1-206ENST00000485737 ZDHHC16Q969W1 377 aa6.91□□□□□ -1.3
SMARCC1-206ENST00000485737 PLA2G2EQ9NZK7 142 aa6.91□□□□□ -1.3
SMARCC1-206ENST00000485737 CUX2O14529 1486 aa6.91□□□□□ -1.3
SMARCC1-206ENST00000485737 PTPREP23469 700 aa6.9□□□□□ -1.3
SMARCC1-206ENST00000485737 ADAM33Q9BZ11 813 aa6.9□□□□□ -1.3
SMARCC1-206ENST00000485737 PCDHGA10Q9Y5H3 936 aa6.9□□□□□ -1.3
SMARCC1-206ENST00000485737 BICRAQ9NZM4 1560 aa6.9□□□□□ -1.31
SMARCC1-206ENST00000485737 STAC3Q96MF2 364 aa6.89□□□□□ -1.31
SMARCC1-206ENST00000485737 BCL2L12Q9HB09 334 aa6.89□□□□□ -1.31
SMARCC1-206ENST00000485737 TOP2BQ02880 1626 aa6.88□□□□□ -1.31
SMARCC1-206ENST00000485737 BIVM-ERCC5R4GMW8 1640 aa6.88□□□□□ -1.31
SMARCC1-206ENST00000485737 SPDYE16A6NNV3 312 aaPredicted RBP6.88□□□□□ -1.31
SMARCC1-206ENST00000485737 PHF14O94880 888 aa6.88□□□□□ -1.31
SMARCC1-206ENST00000485737 UBTFP17480 764 aaKnown RBP6.88□□□□□ -1.31
SMARCC1-206ENST00000485737 PDIA6Q15084 440 aa6.88□□□□□ -1.31
SMARCC1-206ENST00000485737 TYW1BQ6NUM6 668 aa6.88□□□□□ -1.31
SMARCC1-206ENST00000485737 ADGRD1Q6QNK2 874 aa6.88□□□□□ -1.31
SMARCC1-206ENST00000485737 RBM33Q96EV2 1170 aaKnown RBP6.88□□□□□ -1.31
SMARCC1-206ENST00000485737 RAPGEF2Q9Y4G8 1499 aa6.87□□□□□ -1.31
SMARCC1-206ENST00000485737 GRXCR2A6NFK2 248 aa6.87□□□□□ -1.31
SMARCC1-206ENST00000485737 NBR1Q14596 966 aa6.87□□□□□ -1.31
SMARCC1-206ENST00000485737 RRBP1Q9P2E9 1410 aaKnown RBP6.86□□□□□ -1.31
SMARCC1-206ENST00000485737 DHX57Q6P158 1386 aaKnown RBP6.86□□□□□ -1.31
SMARCC1-206ENST00000485737 IFFO2Q5TF58 517 aa6.86□□□□□ -1.31
SMARCC1-206ENST00000485737 KCNV2Q8TDN2 545 aa6.86□□□□□ -1.31
SMARCC1-206ENST00000485737 FBXW7Q969H0 707 aa6.86□□□□□ -1.31
SMARCC1-206ENST00000485737 ARAP1Q96P48 1450 aa6.85□□□□□ -1.31
SMARCC1-206ENST00000485737 PRXQ9BXM0 1461 aa6.85□□□□□ -1.31
SMARCC1-206ENST00000485737 EPAS1Q99814 870 aa6.85□□□□□ -1.31
SMARCC1-206ENST00000485737 ATAD2BQ9ULI0 1458 aa6.85□□□□□ -1.31
SMARCC1-206ENST00000485737 MAP3K7O43318 606 aa6.84□□□□□ -1.31
SMARCC1-206ENST00000485737 ARIH1Q9Y4X5 557 aaPredicted RBP6.84□□□□□ -1.31
SMARCC1-206ENST00000485737 TTBK1Q5TCY1 1321 aaPredicted RBP6.83□□□□□ -1.32
SMARCC1-206ENST00000485737 P3H3Q8IVL6 736 aa6.83□□□□□ -1.32
SMARCC1-206ENST00000485737 ARHGEF1Q92888 912 aaKnown RBP6.83□□□□□ -1.32
SMARCC1-206ENST00000485737 YTHDC1Q96MU7 727 aaKnown RBP6.83□□□□□ -1.32
SMARCC1-206ENST00000485737 C6orf132Q5T0Z8 1188 aa6.82□□□□□ -1.32
SMARCC1-206ENST00000485737 VPS9D1Q9Y2B5 631 aa6.82□□□□□ -1.32
SMARCC1-206ENST00000485737 PPP1R3GB7ZBB8 358 aa6.81□□□□□ -1.32
SMARCC1-206ENST00000485737 COL9A1P20849 921 aa6.81□□□□□ -1.32
SMARCC1-206ENST00000485737 ZBED2Q9BTP6 218 aa6.81□□□□□ -1.32
SMARCC1-206ENST00000485737 HRO43593 1189 aa6.8□□□□□ -1.32
SMARCC1-206ENST00000485737 EN1Q05925 392 aaPredicted RBP6.8□□□□□ -1.32
SMARCC1-206ENST00000485737 TSR1Q2NL82 804 aaKnown RBP6.8□□□□□ -1.32
SMARCC1-206ENST00000485737 PROX2Q3B8N5 592 aa6.8□□□□□ -1.32
SMARCC1-206ENST00000485737 MAP3K1Q13233 1512 aa6.8□□□□□ -1.32
SMARCC1-206ENST00000485737 SUPT16HQ9Y5B9 1047 aaKnown RBP6.79□□□□□ -1.32
SMARCC1-206ENST00000485737 GOLGA8CPA6NN73 597 aa6.78□□□□□ -1.32
SMARCC1-206ENST00000485737 KCTD12Q96CX2 325 aaKnown RBP6.78□□□□□ -1.32
SMARCC1-206ENST00000485737 SLC4A5Q9BY07 1137 aa6.78□□□□□ -1.32
SMARCC1-206ENST00000485737 HMGXB3Q12766 1538 aa6.77□□□□□ -1.33
SMARCC1-206ENST00000485737 MLLT3P42568 568 aaPredicted RBP6.77□□□□□ -1.33
SMARCC1-206ENST00000485737 PRIM1P49642 420 aaKnown RBP6.77□□□□□ -1.33
SMARCC1-206ENST00000485737 MRPL50Q8N5N7 158 aaKnown RBP6.77□□□□□ -1.33
SMARCC1-206ENST00000485737 NBPF3Q9H094 633 aa6.77□□□□□ -1.33
SMARCC1-206ENST00000485737 KDM2AQ9Y2K7 1162 aa6.77□□□□□ -1.33
SMARCC1-206ENST00000485737 MAPKBP1O60336 1514 aa6.76□□□□□ -1.33
SMARCC1-206ENST00000485737 OSBPP22059 807 aa6.76□□□□□ -1.33
SMARCC1-206ENST00000485737 CCNB3Q8WWL7 1395 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms