RNA–Protein interactions for RNA: ENST00000485606.1

EXOSC10-209, Transcript of exosome component 10, humanhuman

TSL 3

Gene EXOSC10, Length 459 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC10-209ENST00000485606 RNF17Q9BXT8 1623 aaKnown RBP28.64■■■□□ 2.18
EXOSC10-209ENST00000485606 DMRT2Q9Y5R5 561 aa28.63■■■□□ 2.17
EXOSC10-209ENST00000485606 FGD6Q6ZV73 1430 aa28.62■■■□□ 2.17
EXOSC10-209ENST00000485606 SHANK2Q9UPX8 1470 aa28.62■■■□□ 2.17
EXOSC10-209ENST00000485606 NCOA1Q15788 1441 aa28.61■■■□□ 2.17
EXOSC10-209ENST00000485606 TCOF1Q13428 1488 aaKnown RBP28.61■■■□□ 2.17
EXOSC10-209ENST00000485606 CEP170BQ9Y4F5 1589 aaPredicted RBP28.6■■■□□ 2.17
EXOSC10-209ENST00000485606 FBXO41Q8TF61 875 aa28.6■■■□□ 2.17
EXOSC10-209ENST00000485606 DNMT1P26358 1616 aaKnown RBP28.59■■■□□ 2.17
EXOSC10-209ENST00000485606 CAMSAP1Q5T5Y3 1602 aa28.58■■■□□ 2.17
EXOSC10-209ENST00000485606 PTPRTO14522 1441 aa28.58■■■□□ 2.17
EXOSC10-209ENST00000485606 ABCC5O15440 1437 aa28.58■■■□□ 2.17
EXOSC10-209ENST00000485606 PZPP20742 1482 aa28.58■■■□□ 2.17
EXOSC10-209ENST00000485606 DUOX2Q9NRD8 1548 aa28.58■■■□□ 2.17
EXOSC10-209ENST00000485606 ZC3H13Q5T200 1668 aaKnown RBP28.57■■■□□ 2.16
EXOSC10-209ENST00000485606 WASHC2CQ9Y4E1 1318 aa28.56■■■□□ 2.16
EXOSC10-209ENST00000485606 DAPK1P53355 1430 aa28.54■■■□□ 2.16
EXOSC10-209ENST00000485606 MROH1Q8NDA8 1641 aa28.53■■■□□ 2.16
EXOSC10-209ENST00000485606 PLA2R1Q13018 1463 aa28.52■■■□□ 2.16
EXOSC10-209ENST00000485606 ABCC3O15438 1527 aa28.51■■■□□ 2.15
EXOSC10-209ENST00000485606 KIF15Q9NS87 1388 aa28.5■■■□□ 2.15
EXOSC10-209ENST00000485606 A2ML1A8K2U0 1454 aa28.5■■■□□ 2.15
EXOSC10-209ENST00000485606 TNRQ92752 1358 aa28.5■■■□□ 2.15
EXOSC10-209ENST00000485606 CERKQ8TCT0 537 aa28.48■■■□□ 2.15
EXOSC10-209ENST00000485606 ERBINQ96RT1 1412 aa28.48■■■□□ 2.15
EXOSC10-209ENST00000485606 FBXO31Q5XUX0 539 aaPredicted RBP28.46■■■□□ 2.15
EXOSC10-209ENST00000485606 CEP152O94986 1710 aa28.45■■■□□ 2.14
EXOSC10-209ENST00000485606 PRDM15P57071 1507 aaPredicted RBP28.44■■■□□ 2.14
EXOSC10-209ENST00000485606 RRP7BPQ9NSQ0 103 aa28.42■■■□□ 2.14
EXOSC10-209ENST00000485606 DEPDC5O75140 1603 aa28.42■■■□□ 2.14
EXOSC10-209ENST00000485606 PKD2Q13563 968 aa28.41■■■□□ 2.14
EXOSC10-209ENST00000485606 SPATA31D1Q6ZQQ2 1576 aa28.41■■■□□ 2.14
EXOSC10-209ENST00000485606 NLRP1Q9C000 1473 aa28.4■■■□□ 2.14
EXOSC10-209ENST00000485606 ANKRD30AQ9BXX3 1397 aa28.4■■■□□ 2.14
EXOSC10-209ENST00000485606 NCKAP5LQ9HCH0 1330 aa28.4■■■□□ 2.14
EXOSC10-209ENST00000485606 ADGRL2O95490 1459 aa28.38■■■□□ 2.13
EXOSC10-209ENST00000485606 POLR1AO95602 1720 aaPredicted RBP28.37■■■□□ 2.13
EXOSC10-209ENST00000485606 LTBP4Q8N2S1 1624 aa28.36■■■□□ 2.13
EXOSC10-209ENST00000485606 ERVK-7P63135 1459 aa28.36■■■□□ 2.13
EXOSC10-209ENST00000485606 CHIC2Q9UKJ5 165 aa28.34■■■□□ 2.13
EXOSC10-209ENST00000485606 UGGT1Q9NYU2 1555 aa28.33■■■□□ 2.12
EXOSC10-209ENST00000485606 FAM50AQ14320 339 aaKnown RBP28.32■■■□□ 2.12
EXOSC10-209ENST00000485606 ARHGAP31Q2M1Z3 1444 aa28.31■■■□□ 2.12
EXOSC10-209ENST00000485606 CFAP65Q6ZU64 1925 aaKnown RBP28.31■■■□□ 2.12
EXOSC10-209ENST00000485606 NEURL4Q96JN8 1562 aa28.29■■■□□ 2.12
EXOSC10-209ENST00000485606 VWDEQ8N2E2 1590 aa28.28■■■□□ 2.12
EXOSC10-209ENST00000485606 IQSEC2Q5JU85 1478 aa28.27■■■□□ 2.12
EXOSC10-209ENST00000485606 KANK1Q14678 1352 aa28.27■■■□□ 2.12
EXOSC10-209ENST00000485606 THEMISQ8N1K5 641 aaPredicted RBP28.27■■■□□ 2.12
EXOSC10-209ENST00000485606 LMTK2Q8IWU2 1503 aa28.27■■■□□ 2.12
EXOSC10-209ENST00000485606 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.24■■■□□ 2.11
EXOSC10-209ENST00000485606 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.24■■■□□ 2.111e-8■■■□□ 16.3
EXOSC10-209ENST00000485606 ZNF335Q9H4Z2 1342 aaPredicted RBP28.22■■■□□ 2.11
EXOSC10-209ENST00000485606 UBR1Q8IWV7 1749 aa28.22■■■□□ 2.11
EXOSC10-209ENST00000485606 ANKRD50Q9ULJ7 1429 aa28.2■■■□□ 2.11
EXOSC10-209ENST00000485606 ANKLE2Q86XL3 938 aa28.2■■■□□ 2.1
EXOSC10-209ENST00000485606 MED14O60244 1454 aa28.19■■■□□ 2.1
EXOSC10-209ENST00000485606 EFCAB6Q5THR3 1501 aa28.18■■■□□ 2.1
EXOSC10-209ENST00000485606 IQGAP1P46940 1657 aa28.15■■■□□ 2.1
EXOSC10-209ENST00000485606 ROCK1Q13464 1354 aa28.14■■■□□ 2.1
EXOSC10-209ENST00000485606 NPHP4O75161 1426 aaPredicted RBP28.13■■■□□ 2.09
EXOSC10-209ENST00000485606 PIK3C2BO00750 1634 aa28.12■■■□□ 2.09
EXOSC10-209ENST00000485606 UNC13BO14795 1591 aa28.11■■■□□ 2.09
EXOSC10-209ENST00000485606 KDM5AP29375 1690 aaKnown RBP28.11■■■□□ 2.09
EXOSC10-209ENST00000485606 SLIT1O75093 1534 aa28.09■■■□□ 2.09
EXOSC10-209ENST00000485606 SYNMO15061 1565 aa28.09■■■□□ 2.09
EXOSC10-209ENST00000485606 PPARGC1BQ86YN6 1023 aaKnown RBP28.09■■■□□ 2.09
EXOSC10-209ENST00000485606 TET3O43151 1660 aa28.09■■■□□ 2.09
EXOSC10-209ENST00000485606 ARHGAP23Q9P227 1491 aa28.08■■■□□ 2.09
EXOSC10-209ENST00000485606 CPS1P31327 1500 aa28.08■■■□□ 2.09
EXOSC10-209ENST00000485606 NOS1P29475 1434 aa28.08■■■□□ 2.09
EXOSC10-209ENST00000485606 RPRD2Q5VT52 1461 aaKnown RBP28.08■■■□□ 2.09
EXOSC10-209ENST00000485606 SCAF11Q99590 1463 aaKnown RBP28.06■■■□□ 2.08
EXOSC10-209ENST00000485606 GCC2Q8IWJ2 1684 aa28.06■■■□□ 2.08
EXOSC10-209ENST00000485606 IQGAP3Q86VI3 1631 aa28■■■□□ 2.07
EXOSC10-209ENST00000485606 ADGRB3O60242 1522 aa27.99■■■□□ 2.07
EXOSC10-209ENST00000485606 IDI1Q13907 227 aa27.99■■■□□ 2.07
EXOSC10-209ENST00000485606 RRBP1Q9P2E9 1410 aaKnown RBP27.99■■■□□ 2.07
EXOSC10-209ENST00000485606 TMEM2Q9UHN6 1383 aa27.99■■■□□ 2.07
EXOSC10-209ENST00000485606 LTKP29376 864 aa27.97■■■□□ 2.07
EXOSC10-209ENST00000485606 ITGAEP38570 1179 aa27.97■■■□□ 2.07
EXOSC10-209ENST00000485606 TXNDC2Q86VQ3 553 aa27.96■■■□□ 2.07
EXOSC10-209ENST00000485606 STAG3Q9UJ98 1225 aa27.96■■■□□ 2.07
EXOSC10-209ENST00000485606 STRCP1A6NGW2 1772 aa27.96■■■□□ 2.07
EXOSC10-209ENST00000485606 E9PCH4 1651 aa27.95■■■□□ 2.07
EXOSC10-209ENST00000485606 SLC52A1Q9NWF4 448 aa27.95■■■□□ 2.06
EXOSC10-209ENST00000485606 EID1Q9Y6B2 187 aa27.95■■■□□ 2.06
EXOSC10-209ENST00000485606 UBAP1LF5GYI3 381 aa27.94■■■□□ 2.06
EXOSC10-209ENST00000485606 MYO5BQ9ULV0 1848 aa27.88■■■□□ 2.05
EXOSC10-209ENST00000485606 NUP155O75694 1391 aa27.87■■■□□ 2.05
EXOSC10-209ENST00000485606 TMEM131LA2VDJ0 1609 aa27.86■■■□□ 2.05
EXOSC10-209ENST00000485606 LRRC7Q96NW7 1537 aa27.86■■■□□ 2.05
EXOSC10-209ENST00000485606 TOM1O60784 492 aa27.81■■■□□ 2.04
EXOSC10-209ENST00000485606 ZFYVE9O95405 1425 aa27.81■■■□□ 2.04
EXOSC10-209ENST00000485606 ALKQ9UM73 1620 aa27.78■■■□□ 2.04
EXOSC10-209ENST00000485606 NAIPQ13075 1403 aa27.78■■■□□ 2.04
EXOSC10-209ENST00000485606 SPHKAPQ2M3C7 1700 aa27.76■■■□□ 2.03
EXOSC10-209ENST00000485606 XIRP1Q702N8 1843 aaKnown RBP27.76■■■□□ 2.03
EXOSC10-209ENST00000485606 RIMS2Q9UQ26 1411 aa27.75■■■□□ 2.03
EXOSC10-209ENST00000485606 PLEKHG1Q9ULL1 1385 aa27.73■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms