RNA–Protein interactions for RNA: ENST00000485310.1

CRTAP-203, Transcript of cartilage associated protein, humanhuman

TSL 4

Gene CRTAP, Length 562 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTAP-203ENST00000485310 DEPDC5O75140 1603 aa9.42□□□□□ -0.9
CRTAP-203ENST00000485310 NUTM2BA6NNL0 878 aaPredicted RBP9.41□□□□□ -0.9
CRTAP-203ENST00000485310 NUTM2EB1AL46 878 aaPredicted RBP9.41□□□□□ -0.9
CRTAP-203ENST00000485310 NUTM2DQ5VT03 806 aaPredicted RBP9.41□□□□□ -0.9
CRTAP-203ENST00000485310 NUTM2AQ8IVF1 878 aaPredicted RBP9.41□□□□□ -0.9
CRTAP-203ENST00000485310 PHLPP1O60346 1717 aa9.41□□□□□ -0.9
CRTAP-203ENST00000485310 SAMD9Q5K651 1589 aa9.41□□□□□ -0.9
CRTAP-203ENST00000485310 YY1P25490 414 aa9.39□□□□□ -0.91
CRTAP-203ENST00000485310 ZC3H13Q5T200 1668 aaKnown RBP9.39□□□□□ -0.91
CRTAP-203ENST00000485310 COL16A1Q07092 1604 aaPredicted RBP9.38□□□□□ -0.91
CRTAP-203ENST00000485310 SUPT5HO00267 1087 aaKnown RBP9.38□□□□□ -0.91
CRTAP-203ENST00000485310 THEMISQ8N1K5 641 aaPredicted RBP9.38□□□□□ -0.91
CRTAP-203ENST00000485310 ARHGAP5Q13017 1502 aa9.37□□□□□ -0.91
CRTAP-203ENST00000485310 POTEDQ86YR6 584 aa9.37□□□□□ -0.91
CRTAP-203ENST00000485310 KIF14Q15058 1648 aa9.37□□□□□ -0.91
CRTAP-203ENST00000485310 SPATA31A6Q5VVP1 1343 aa9.36□□□□□ -0.91
CRTAP-203ENST00000485310 FBXO31Q5XUX0 539 aaPredicted RBP9.36□□□□□ -0.91
CRTAP-203ENST00000485310 GGT6Q6P531 493 aa9.36□□□□□ -0.91
CRTAP-203ENST00000485310 MAP3K1Q13233 1512 aa9.36□□□□□ -0.91
CRTAP-203ENST00000485310 CEP350Q5VT06 3117 aa9.35□□□□□ -0.91
CRTAP-203ENST00000485310 TNRQ92752 1358 aa9.35□□□□□ -0.91
CRTAP-203ENST00000485310 ATAD2Q6PL18 1390 aa9.34□□□□□ -0.91
CRTAP-203ENST00000485310 PLXNC1O60486 1568 aa9.33□□□□□ -0.92
CRTAP-203ENST00000485310 RBM6P78332 1123 aaKnown RBP9.33□□□□□ -0.92
CRTAP-203ENST00000485310 UGGT1Q9NYU2 1555 aa9.33□□□□□ -0.92
CRTAP-203ENST00000485310 AFF2P51816 1311 aa9.32□□□□□ -0.92
CRTAP-203ENST00000485310 QTRT2Q9H974 415 aaKnown RBP9.32□□□□□ -0.92
CRTAP-203ENST00000485310 SENP3-EIF4A1A0A087X0R7 540 aa9.31□□□□□ -0.92
CRTAP-203ENST00000485310 TMEM94Q12767 1356 aa9.31□□□□□ -0.92
CRTAP-203ENST00000485310 SHPRHQ149N8 1683 aa9.3□□□□□ -0.92
CRTAP-203ENST00000485310 SAMD9LQ8IVG5 1584 aa9.3□□□□□ -0.92
CRTAP-203ENST00000485310 CDC42BPBQ9Y5S2 1711 aa9.3□□□□□ -0.92
CRTAP-203ENST00000485310 NHSL1Q5SYE7 1610 aa9.3□□□□□ -0.92
CRTAP-203ENST00000485310 ATP7AQ04656 1500 aa9.3□□□□□ -0.92
CRTAP-203ENST00000485310 KDM5DQ9BY66 1539 aa9.3□□□□□ -0.92
CRTAP-203ENST00000485310 FAM135AQ9P2D6 1515 aa9.3□□□□□ -0.92
CRTAP-203ENST00000485310 LRRC9Q6ZRR7 1453 aa9.29□□□□□ -0.92
CRTAP-203ENST00000485310 CCDC125Q86Z20 511 aa9.29□□□□□ -0.92
CRTAP-203ENST00000485310 SLAIN2Q9P270 581 aa9.29□□□□□ -0.92
CRTAP-203ENST00000485310 FGD6Q6ZV73 1430 aa9.29□□□□□ -0.92
CRTAP-203ENST00000485310 PRXQ9BXM0 1461 aa9.28□□□□□ -0.92
CRTAP-203ENST00000485310 PZPP20742 1482 aa9.27□□□□□ -0.93
CRTAP-203ENST00000485310 TIAM1Q13009 1591 aa9.26□□□□□ -0.93
CRTAP-203ENST00000485310 MIA2Q96PC5 1412 aa9.26□□□□□ -0.93
CRTAP-203ENST00000485310 RANGAP1P46060 587 aaPredicted RBP9.26□□□□□ -0.93
CRTAP-203ENST00000485310 DIP2AQ14689 1571 aa9.25□□□□□ -0.93
CRTAP-203ENST00000485310 PROSER2Q86WR7 435 aaPredicted RBP9.25□□□□□ -0.93
CRTAP-203ENST00000485310 NGLY1Q96IV0 654 aa9.25□□□□□ -0.93
CRTAP-203ENST00000485310 A2MP01023 1474 aa9.25□□□□□ -0.93
CRTAP-203ENST00000485310 BCL9LQ86UU0 1499 aa9.25□□□□□ -0.93
CRTAP-203ENST00000485310 NLRP1Q9C000 1473 aa9.25□□□□□ -0.93
CRTAP-203ENST00000485310 SPAG9O60271 1321 aaKnown RBP9.25□□□□□ -0.93
CRTAP-203ENST00000485310 NWD1Q149M9 1564 aa9.24□□□□□ -0.93
CRTAP-203ENST00000485310 PREX2Q70Z35 1606 aa9.24□□□□□ -0.93
CRTAP-203ENST00000485310 PSDA5PKW4 1024 aaPredicted RBP9.24□□□□□ -0.93
CRTAP-203ENST00000485310 HRCP23327 699 aa9.24□□□□□ -0.93
CRTAP-203ENST00000485310 ADGBQ8N7X0 1667 aa9.23□□□□□ -0.93
CRTAP-203ENST00000485310 SCAF11Q99590 1463 aaKnown RBP9.23□□□□□ -0.93
CRTAP-203ENST00000485310 INO80Q9ULG1 1556 aaPredicted RBP9.23□□□□□ -0.93
CRTAP-203ENST00000485310 UTRNP46939 3433 aa9.23□□□□□ -0.93
CRTAP-203ENST00000485310 LTKP29376 864 aa9.22□□□□□ -0.93
CRTAP-203ENST00000485310 DEFB132Q7Z7B7 95 aa9.22□□□□□ -0.93
CRTAP-203ENST00000485310 C8orf37Q96NL8 207 aa9.22□□□□□ -0.93
CRTAP-203ENST00000485310 AHDC1Q5TGY3 1603 aaPredicted RBP9.22□□□□□ -0.93
CRTAP-203ENST00000485310 SYCP2Q9BX26 1530 aa9.21□□□□□ -0.93
CRTAP-203ENST00000485310 KCNA6P17658 529 aa9.21□□□□□ -0.94
CRTAP-203ENST00000485310 MAPK8IP2Q13387 824 aaPredicted RBP9.21□□□□□ -0.94
CRTAP-203ENST00000485310 TXNDC2Q86VQ3 553 aa9.21□□□□□ -0.94
CRTAP-203ENST00000485310 ATP1B4Q9UN42 357 aaPredicted RBP9.2□□□□□ -0.94
CRTAP-203ENST00000485310 CDK11AQ9UQ88 783 aaPredicted RBP9.2□□□□□ -0.94
CRTAP-203ENST00000485310 PRDM15P57071 1507 aaPredicted RBP9.2□□□□□ -0.94
CRTAP-203ENST00000485310 HNRNPMP52272 730 aaKnown RBP eCLIP9.19□□□□□ -0.94
CRTAP-203ENST00000485310 MSH6P52701 1360 aa9.19□□□□□ -0.94
CRTAP-203ENST00000485310 NCOA2Q15596 1464 aa9.19□□□□□ -0.94
CRTAP-203ENST00000485310 KDM5AP29375 1690 aaKnown RBP9.19□□□□□ -0.94
CRTAP-203ENST00000485310 C1QTNF8P60827 252 aa9.18□□□□□ -0.94
CRTAP-203ENST00000485310 TROQ12816 1431 aaPredicted RBP9.18□□□□□ -0.94
CRTAP-203ENST00000485310 PPP4R3CPQ6ZMV5 832 aa9.18□□□□□ -0.94
CRTAP-203ENST00000485310 UBR1Q8IWV7 1749 aa9.18□□□□□ -0.94
CRTAP-203ENST00000485310 MAST1Q9Y2H9 1570 aa9.18□□□□□ -0.94
CRTAP-203ENST00000485310 ZNF777Q9ULD5 760 aaPredicted RBP9.17□□□□□ -0.94
CRTAP-203ENST00000485310 ARHGAP23Q9P227 1491 aa9.16□□□□□ -0.94
CRTAP-203ENST00000485310 BLMP54132 1417 aaPredicted RBP9.16□□□□□ -0.94
CRTAP-203ENST00000485310 WASHC2CQ9Y4E1 1318 aa9.16□□□□□ -0.94
CRTAP-203ENST00000485310 ZNF784Q8NCA9 323 aaPredicted RBP9.16□□□□□ -0.94
CRTAP-203ENST00000485310 CDC42BPAQ5VT25 1732 aa9.15□□□□□ -0.94
CRTAP-203ENST00000485310 SLIT1O75093 1534 aa9.15□□□□□ -0.95
CRTAP-203ENST00000485310 TRPC5Q9UL62 973 aaPredicted RBP9.14□□□□□ -0.95
CRTAP-203ENST00000485310 NKTRP30414 1462 aaKnown RBP9.14□□□□□ -0.95
CRTAP-203ENST00000485310 KIF3BO15066 747 aa9.13□□□□□ -0.95
CRTAP-203ENST00000485310 SLC26A8Q96RN1 970 aa9.13□□□□□ -0.95
CRTAP-203ENST00000485310 USP21Q9UK80 565 aa9.13□□□□□ -0.95
CRTAP-203ENST00000485310 EID1Q9Y6B2 187 aa9.13□□□□□ -0.95
CRTAP-203ENST00000485310 ABCC3O15438 1527 aa9.13□□□□□ -0.95
CRTAP-203ENST00000485310 CAMTA1Q9Y6Y1 1673 aa9.13□□□□□ -0.95
CRTAP-203ENST00000485310 CLIP1P30622 1438 aa9.13□□□□□ -0.95
CRTAP-203ENST00000485310 LRRIQ1Q96JM4 1722 aa9.12□□□□□ -0.95
CRTAP-203ENST00000485310 ADAMTS2O95450 1211 aa9.12□□□□□ -0.95
CRTAP-203ENST00000485310 KCNA4P22459 653 aa9.12□□□□□ -0.95
CRTAP-203ENST00000485310 SF3B2Q13435 895 aaKnown RBP9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms