RNA–Protein interactions for RNA: ENST00000485248.2

CAPN13-206, Transcript of calpain 13, humanhuman

TSL 3

Gene CAPN13, Length 710 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN13-206ENST00000485248 THEMISQ8N1K5 641 aaPredicted RBP10.67□□□□□ -0.7
CAPN13-206ENST00000485248 GGT6Q6P531 493 aa10.66□□□□□ -0.7
CAPN13-206ENST00000485248 ZRANB1Q9UGI0 708 aa10.66□□□□□ -0.7
CAPN13-206ENST00000485248 FAM135AQ9P2D6 1515 aa10.66□□□□□ -0.7
CAPN13-206ENST00000485248 KIDINS220Q9ULH0 1771 aa10.66□□□□□ -0.7
CAPN13-206ENST00000485248 PRXQ9BXM0 1461 aa10.66□□□□□ -0.7
CAPN13-206ENST00000485248 DEPDC5O75140 1603 aa10.65□□□□□ -0.7
CAPN13-206ENST00000485248 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.65□□□□□ -0.71
CAPN13-206ENST00000485248 ABCC1P33527 1531 aa10.64□□□□□ -0.71
CAPN13-206ENST00000485248 RXRBP28702 533 aa10.64□□□□□ -0.71
CAPN13-206ENST00000485248 FAM135BQ49AJ0 1406 aa10.63□□□□□ -0.71
CAPN13-206ENST00000485248 TNRQ92752 1358 aa10.63□□□□□ -0.71
CAPN13-206ENST00000485248 MED14O60244 1454 aa10.62□□□□□ -0.71
CAPN13-206ENST00000485248 ROBO1Q9Y6N7 1651 aa10.62□□□□□ -0.71
CAPN13-206ENST00000485248 JCADQ9P266 1359 aa10.62□□□□□ -0.71
CAPN13-206ENST00000485248 UGGT1Q9NYU2 1555 aa10.61□□□□□ -0.71
CAPN13-206ENST00000485248 STRCP1A6NGW2 1772 aa10.61□□□□□ -0.71
CAPN13-206ENST00000485248 LRRC9Q6ZRR7 1453 aa10.61□□□□□ -0.71
CAPN13-206ENST00000485248 PREX2Q70Z35 1606 aa10.6□□□□□ -0.71
CAPN13-206ENST00000485248 PHLPP1O60346 1717 aa10.6□□□□□ -0.71
CAPN13-206ENST00000485248 CDC42BPBQ9Y5S2 1711 aa10.6□□□□□ -0.71
CAPN13-206ENST00000485248 SPAG9O60271 1321 aaKnown RBP10.59□□□□□ -0.71
CAPN13-206ENST00000485248 NUTM2BA6NNL0 878 aaPredicted RBP10.59□□□□□ -0.71
CAPN13-206ENST00000485248 NUTM2EB1AL46 878 aaPredicted RBP10.59□□□□□ -0.71
CAPN13-206ENST00000485248 NUTM2DQ5VT03 806 aaPredicted RBP10.59□□□□□ -0.71
CAPN13-206ENST00000485248 NUTM2AQ8IVF1 878 aaPredicted RBP10.59□□□□□ -0.71
CAPN13-206ENST00000485248 RBM33Q96EV2 1170 aaKnown RBP10.59□□□□□ -0.71
CAPN13-206ENST00000485248 A2MP01023 1474 aa10.58□□□□□ -0.72
CAPN13-206ENST00000485248 NLRP1Q9C000 1473 aa10.58□□□□□ -0.72
CAPN13-206ENST00000485248 CDK12Q9NYV4 1490 aaPredicted RBP10.58□□□□□ -0.72
CAPN13-206ENST00000485248 SAMD9LQ8IVG5 1584 aa10.57□□□□□ -0.72
CAPN13-206ENST00000485248 ATP7AQ04656 1500 aa10.57□□□□□ -0.72
CAPN13-206ENST00000485248 KDM5DQ9BY66 1539 aa10.57□□□□□ -0.72
CAPN13-206ENST00000485248 TROQ12816 1431 aaPredicted RBP10.57□□□□□ -0.72
CAPN13-206ENST00000485248 SPATA31A6Q5VVP1 1343 aa10.57□□□□□ -0.72
CAPN13-206ENST00000485248 PLXNC1O60486 1568 aa10.56□□□□□ -0.72
CAPN13-206ENST00000485248 ADGBQ8N7X0 1667 aa10.55□□□□□ -0.72
CAPN13-206ENST00000485248 ZNF777Q9ULD5 760 aaPredicted RBP10.55□□□□□ -0.72
CAPN13-206ENST00000485248 PZPP20742 1482 aa10.54□□□□□ -0.72
CAPN13-206ENST00000485248 ATAD2Q6PL18 1390 aa10.53□□□□□ -0.72
CAPN13-206ENST00000485248 XIRP1Q702N8 1843 aaKnown RBP10.53□□□□□ -0.72
CAPN13-206ENST00000485248 FMN1Q68DA7 1419 aa10.52□□□□□ -0.73
CAPN13-206ENST00000485248 SYCP2Q9BX26 1530 aa10.52□□□□□ -0.73
CAPN13-206ENST00000485248 SETBP1Q9Y6X0 1596 aa10.52□□□□□ -0.73
CAPN13-206ENST00000485248 ZC3H13Q5T200 1668 aaKnown RBP10.51□□□□□ -0.73
CAPN13-206ENST00000485248 FBXO31Q5XUX0 539 aaPredicted RBP10.51□□□□□ -0.73
CAPN13-206ENST00000485248 INO80Q9ULG1 1556 aaPredicted RBP10.51□□□□□ -0.73
CAPN13-206ENST00000485248 MIA2Q96PC5 1412 aa10.5□□□□□ -0.73
CAPN13-206ENST00000485248 MSH6P52701 1360 aa10.5□□□□□ -0.73
CAPN13-206ENST00000485248 FGD6Q6ZV73 1430 aa10.5□□□□□ -0.73
CAPN13-206ENST00000485248 LRP6O75581 1613 aa10.49□□□□□ -0.73
CAPN13-206ENST00000485248 WASHC2CQ9Y4E1 1318 aa10.49□□□□□ -0.73
CAPN13-206ENST00000485248 SRCAPQ6ZRS2 3230 aa10.49□□□□□ -0.73
CAPN13-206ENST00000485248 TMEM94Q12767 1356 aa10.49□□□□□ -0.73
CAPN13-206ENST00000485248 SCAF11Q99590 1463 aaKnown RBP10.49□□□□□ -0.73
CAPN13-206ENST00000485248 CDC42BPAQ5VT25 1732 aa10.48□□□□□ -0.73
CAPN13-206ENST00000485248 EID1Q9Y6B2 187 aa10.48□□□□□ -0.73
CAPN13-206ENST00000485248 RBM6P78332 1123 aaKnown RBP10.47□□□□□ -0.73
CAPN13-206ENST00000485248 IFFO2Q5TF58 517 aa10.47□□□□□ -0.73
CAPN13-206ENST00000485248 PROSER2Q86WR7 435 aaPredicted RBP10.47□□□□□ -0.73
CAPN13-206ENST00000485248 NGLY1Q96IV0 654 aa10.47□□□□□ -0.73
CAPN13-206ENST00000485248 RGS12O14924 1447 aa10.47□□□□□ -0.73
CAPN13-206ENST00000485248 PLEKHH2Q8IVE3 1493 aa10.47□□□□□ -0.73
CAPN13-206ENST00000485248 SHPRHQ149N8 1683 aa10.47□□□□□ -0.73
CAPN13-206ENST00000485248 HNRNPMP52272 730 aaKnown RBP eCLIP10.46□□□□□ -0.73
CAPN13-206ENST00000485248 AFF2P51816 1311 aa10.46□□□□□ -0.73
CAPN13-206ENST00000485248 COL16A1Q07092 1604 aaPredicted RBP10.46□□□□□ -0.74
CAPN13-206ENST00000485248 TXNDC2Q86VQ3 553 aa10.44□□□□□ -0.74
CAPN13-206ENST00000485248 SLAIN2Q9P270 581 aa10.44□□□□□ -0.74
CAPN13-206ENST00000485248 LRP5O75197 1615 aa10.44□□□□□ -0.74
CAPN13-206ENST00000485248 KIF3BO15066 747 aa10.43□□□□□ -0.74
CAPN13-206ENST00000485248 CCDC125Q86Z20 511 aa10.43□□□□□ -0.74
CAPN13-206ENST00000485248 TIAM1Q13009 1591 aa10.43□□□□□ -0.74
CAPN13-206ENST00000485248 YY1P25490 414 aa10.42□□□□□ -0.74
CAPN13-206ENST00000485248 QTRT2Q9H974 415 aaKnown RBP10.42□□□□□ -0.74
CAPN13-206ENST00000485248 ABCC3O15438 1527 aa10.42□□□□□ -0.74
CAPN13-206ENST00000485248 MAP3K1Q13233 1512 aa10.42□□□□□ -0.74
CAPN13-206ENST00000485248 UBR1Q8IWV7 1749 aa10.41□□□□□ -0.74
CAPN13-206ENST00000485248 C14orf37Q86TY3 774 aa10.41□□□□□ -0.74
CAPN13-206ENST00000485248 C8orf37Q96NL8 207 aa10.41□□□□□ -0.74
CAPN13-206ENST00000485248 NKTRP30414 1462 aaKnown RBP10.41□□□□□ -0.74
CAPN13-206ENST00000485248 CCDC18Q5T9S5 1454 aa10.41□□□□□ -0.74
CAPN13-206ENST00000485248 KIAA1107Q9UPP5 1409 aa10.41□□□□□ -0.74
CAPN13-206ENST00000485248 PRDM15P57071 1507 aaPredicted RBP10.4□□□□□ -0.74
CAPN13-206ENST00000485248 KCNA6P17658 529 aa10.4□□□□□ -0.74
CAPN13-206ENST00000485248 STAG3Q9UJ98 1225 aa10.4□□□□□ -0.74
CAPN13-206ENST00000485248 BCANQ96GW7 911 aa10.39□□□□□ -0.75
CAPN13-206ENST00000485248 CFDP1Q9UEE9 299 aaPredicted RBP10.39□□□□□ -0.75
CAPN13-206ENST00000485248 NWD1Q149M9 1564 aa10.39□□□□□ -0.75
CAPN13-206ENST00000485248 DHX29Q7Z478 1369 aaKnown RBP10.39□□□□□ -0.75
CAPN13-206ENST00000485248 SF3B2Q13435 895 aaKnown RBP10.38□□□□□ -0.75
CAPN13-206ENST00000485248 FKBP8Q14318 412 aa10.38□□□□□ -0.75
CAPN13-206ENST00000485248 LRRIQ1Q96JM4 1722 aa10.38□□□□□ -0.75
CAPN13-206ENST00000485248 AHDC1Q5TGY3 1603 aaPredicted RBP10.37□□□□□ -0.75
CAPN13-206ENST00000485248 DCAF8L1A6NGE4 600 aa10.37□□□□□ -0.75
CAPN13-206ENST00000485248 MAPK8IP2Q13387 824 aaPredicted RBP10.37□□□□□ -0.75
CAPN13-206ENST00000485248 RNF216Q9NWF9 866 aaPredicted RBP10.37□□□□□ -0.75
CAPN13-206ENST00000485248 KDM5AP29375 1690 aaKnown RBP10.37□□□□□ -0.75
CAPN13-206ENST00000485248 SLIT1O75093 1534 aa10.37□□□□□ -0.75
CAPN13-206ENST00000485248 RTEL1-TNFRSF6BF6WH68 1400 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms