RNA–Protein interactions for RNA: ENST00000485091.5

CCDC78-214, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,734 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-214ENST00000485091 FOXD1Q16676 465 aa25.6■■□□□ 1.69
CCDC78-214ENST00000485091 UNC13BO14795 1591 aa25.59■■□□□ 1.69
CCDC78-214ENST00000485091 ZEB1P37275 1124 aaPredicted RBP25.58■■□□□ 1.69
CCDC78-214ENST00000485091 CLSPNQ9HAW4 1339 aa25.58■■□□□ 1.68
CCDC78-214ENST00000485091 EIF2AK4Q9P2K8 1649 aaKnown RBP25.56■■□□□ 1.68
CCDC78-214ENST00000485091 KDM5DQ9BY66 1539 aa25.55■■□□□ 1.68
CCDC78-214ENST00000485091 ATP10AO60312 1499 aa25.55■■□□□ 1.68
CCDC78-214ENST00000485091 PKD2Q13563 968 aa25.54■■□□□ 1.68
CCDC78-214ENST00000485091 GGT6Q6P531 493 aa25.54■■□□□ 1.68
CCDC78-214ENST00000485091 SIN3AQ96ST3 1273 aa25.53■■□□□ 1.68
CCDC78-214ENST00000485091 FAM135AQ9P2D6 1515 aa25.53■■□□□ 1.68
CCDC78-214ENST00000485091 NEUROD1Q13562 356 aa25.51■■□□□ 1.67
CCDC78-214ENST00000485091 DEPDC5O75140 1603 aa25.5■■□□□ 1.67
CCDC78-214ENST00000485091 ARHGEF40Q8TER5 1519 aa25.5■■□□□ 1.67
CCDC78-214ENST00000485091 KANK1Q14678 1352 aa25.5■■□□□ 1.67
CCDC78-214ENST00000485091 IQGAP3Q86VI3 1631 aa25.49■■□□□ 1.67
CCDC78-214ENST00000485091 MROH1Q8NDA8 1641 aa25.46■■□□□ 1.67
CCDC78-214ENST00000485091 PRDM15P57071 1507 aaPredicted RBP25.45■■□□□ 1.66
CCDC78-214ENST00000485091 RNF17Q9BXT8 1623 aaKnown RBP25.45■■□□□ 1.66
CCDC78-214ENST00000485091 BCORL1Q5H9F3 1711 aa25.43■■□□□ 1.66
CCDC78-214ENST00000485091 REREQ9P2R6 1566 aa25.42■■□□□ 1.66
CCDC78-214ENST00000485091 SIGLEC1Q9BZZ2 1709 aa25.41■■□□□ 1.66
CCDC78-214ENST00000485091 ANKRD30BQ9BXX2 1392 aa25.41■■□□□ 1.66
CCDC78-214ENST00000485091 VWDEQ8N2E2 1590 aa25.41■■□□□ 1.66
CCDC78-214ENST00000485091 MLECQ14165 292 aa25.4■■□□□ 1.66
CCDC78-214ENST00000485091 ARID4BQ4LE39 1312 aaPredicted RBP25.39■■□□□ 1.66
CCDC78-214ENST00000485091 WASHC2CQ9Y4E1 1318 aa25.38■■□□□ 1.65
CCDC78-214ENST00000485091 CEP152O94986 1710 aa25.37■■□□□ 1.65
CCDC78-214ENST00000485091 AGLP35573 1532 aa25.37■■□□□ 1.65
CCDC78-214ENST00000485091 AEBP2Q6ZN18 517 aaPredicted RBP25.35■■□□□ 1.65
CCDC78-214ENST00000485091 TET3O43151 1660 aa25.35■■□□□ 1.65
CCDC78-214ENST00000485091 E9PCH4 1651 aa25.32■■□□□ 1.64
CCDC78-214ENST00000485091 ABCC3O15438 1527 aa25.32■■□□□ 1.64
CCDC78-214ENST00000485091 LMTK2Q8IWU2 1503 aa25.31■■□□□ 1.64
CCDC78-214ENST00000485091 TONSLQ96HA7 1378 aa25.28■■□□□ 1.64
CCDC78-214ENST00000485091 EFCAB6Q5THR3 1501 aa25.28■■□□□ 1.64
CCDC78-214ENST00000485091 KDM4FA0A1W2PPD8 638 aa25.26■■□□□ 1.63
CCDC78-214ENST00000485091 PLA2R1Q13018 1463 aa25.26■■□□□ 1.63
CCDC78-214ENST00000485091 RPRD2Q5VT52 1461 aaKnown RBP25.26■■□□□ 1.63
CCDC78-214ENST00000485091 CAMSAP1Q5T5Y3 1602 aa25.24■■□□□ 1.63
CCDC78-214ENST00000485091 ZC3H13Q5T200 1668 aaKnown RBP25.24■■□□□ 1.63
CCDC78-214ENST00000485091 CCDC144AA2RUR9 1427 aa25.23■■□□□ 1.63
CCDC78-214ENST00000485091 ESF1Q9H501 851 aaKnown RBP25.23■■□□□ 1.63
CCDC78-214ENST00000485091 NPATQ14207 1427 aa25.22■■□□□ 1.63
CCDC78-214ENST00000485091 PPP6R1Q9UPN7 881 aa25.22■■□□□ 1.63
CCDC78-214ENST00000485091 CLTCQ00610 1675 aaKnown RBP25.21■■□□□ 1.63
CCDC78-214ENST00000485091 TIMELESSQ9UNS1 1208 aa25.2■■□□□ 1.63
CCDC78-214ENST00000485091 SPHKAPQ2M3C7 1700 aa25.2■■□□□ 1.62
CCDC78-214ENST00000485091 CFAP65Q6ZU64 1925 aaKnown RBP25.19■■□□□ 1.62
CCDC78-214ENST00000485091 PTPRTO14522 1441 aa25.18■■□□□ 1.62
CCDC78-214ENST00000485091 L3MBTL2Q969R5 705 aa25.17■■□□□ 1.62
CCDC78-214ENST00000485091 TRPM2O94759 1503 aa25.16■■□□□ 1.62
CCDC78-214ENST00000485091 ARHGAP31Q2M1Z3 1444 aa25.14■■□□□ 1.62
CCDC78-214ENST00000485091 PPP1R15AO75807 674 aaPredicted RBP25.12■■□□□ 1.61
CCDC78-214ENST00000485091 FBXO31Q5XUX0 539 aaPredicted RBP25.12■■□□□ 1.61
CCDC78-214ENST00000485091 UGGT1Q9NYU2 1555 aa25.12■■□□□ 1.61
CCDC78-214ENST00000485091 CLTCL1P53675 1640 aa25.12■■□□□ 1.61
CCDC78-214ENST00000485091 RGL3Q3MIN7 710 aa25.12■■□□□ 1.61
CCDC78-214ENST00000485091 ZMYM3Q14202 1370 aa25.09■■□□□ 1.61
CCDC78-214ENST00000485091 NOS1P29475 1434 aa25.08■■□□□ 1.61
CCDC78-214ENST00000485091 CNTLNQ9NXG0 1405 aa25.08■■□□□ 1.61
CCDC78-214ENST00000485091 PREX1Q8TCU6 1659 aa25.06■■□□□ 1.6
CCDC78-214ENST00000485091 CHGAP10645 457 aaKnown RBP25.06■■□□□ 1.6
CCDC78-214ENST00000485091 PLPPR3Q6T4P5 718 aa25.06■■□□□ 1.6
CCDC78-214ENST00000485091 KDM2AQ9Y2K7 1162 aa25.04■■□□□ 1.6
CCDC78-214ENST00000485091 SYNMO15061 1565 aa25.04■■□□□ 1.6
CCDC78-214ENST00000485091 DCAF11Q8TEB1 546 aa25.03■■□□□ 1.6
CCDC78-214ENST00000485091 FER1L4A9Z1Z3 1794 aa25.03■■□□□ 1.6
CCDC78-214ENST00000485091 ERVK-7P63135 1459 aa25.03■■□□□ 1.6
CCDC78-214ENST00000485091 ZNF326Q5BKZ1 582 aaKnown RBP25.02■■□□□ 1.6
CCDC78-214ENST00000485091 CEBPAP49715 358 aaPredicted RBP25.01■■□□□ 1.59
CCDC78-214ENST00000485091 SPATA31E1Q6ZUB1 1445 aa25■■□□□ 1.59
CCDC78-214ENST00000485091 IDI1Q13907 227 aa24.99■■□□□ 1.59
CCDC78-214ENST00000485091 KIF1BO60333 1816 aa24.98■■□□□ 1.59
CCDC78-214ENST00000485091 MROH2AA6NES4 1674 aa24.98■■□□□ 1.59
CCDC78-214ENST00000485091 NBPF8Q3BBV2 869 aa24.97■■□□□ 1.59
CCDC78-214ENST00000485091 MADDQ8WXG6 1647 aa24.97■■□□□ 1.59
CCDC78-214ENST00000485091 SPATA31D1Q6ZQQ2 1576 aa24.96■■□□□ 1.59
CCDC78-214ENST00000485091 SLC52A1Q9NWF4 448 aa24.96■■□□□ 1.59
CCDC78-214ENST00000485091 PIK3C2BO00750 1634 aa24.95■■□□□ 1.59
CCDC78-214ENST00000485091 ADAMTSL3P82987 1691 aa24.95■■□□□ 1.58
CCDC78-214ENST00000485091 RIMS1Q86UR5 1692 aaKnown RBP24.93■■□□□ 1.58
CCDC78-214ENST00000485091 C3P01024 1663 aa24.92■■□□□ 1.58
CCDC78-214ENST00000485091 ADGRB3O60242 1522 aa24.91■■□□□ 1.58
CCDC78-214ENST00000485091 TNRQ92752 1358 aa24.91■■□□□ 1.58
CCDC78-214ENST00000485091 STAG3Q9UJ98 1225 aa24.9■■□□□ 1.58
CCDC78-214ENST00000485091 NEURL4Q96JN8 1562 aa24.87■■□□□ 1.57
CCDC78-214ENST00000485091 PTPRMP28827 1452 aa24.85■■□□□ 1.57
CCDC78-214ENST00000485091 UHRF1BP1Q6BDS2 1440 aa24.85■■□□□ 1.57
CCDC78-214ENST00000485091 NUTM2DQ5VT03 806 aaPredicted RBP24.83■■□□□ 1.57
CCDC78-214ENST00000485091 PRAG1Q86YV5 1406 aa24.83■■□□□ 1.57
CCDC78-214ENST00000485091 TMEM131LA2VDJ0 1609 aa24.83■■□□□ 1.57
CCDC78-214ENST00000485091 MYO5BQ9ULV0 1848 aa24.82■■□□□ 1.56
CCDC78-214ENST00000485091 RPGRIP1LQ68CZ1 1315 aa24.79■■□□□ 1.56
CCDC78-214ENST00000485091 ADGRF5Q8IZF2 1346 aa24.79■■□□□ 1.56
CCDC78-214ENST00000485091 IFT172Q9UG01 1749 aa24.79■■□□□ 1.56
CCDC78-214ENST00000485091 ZNF316A6NFI3 1004 aaPredicted RBP24.78■■□□□ 1.56
CCDC78-214ENST00000485091 STAC3Q96MF2 364 aa24.78■■□□□ 1.56
CCDC78-214ENST00000485091 A2ML1A8K2U0 1454 aa24.77■■□□□ 1.56
CCDC78-214ENST00000485091 HIRIP3Q9BW71 556 aaPredicted RBP24.77■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms