RNA–Protein interactions for RNA: ENST00000485065.1

TRUB1-202, Transcript of TruB pseudouridine synthase family member 1, humanhuman

TSL 2

Gene TRUB1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-202ENST00000485065 PTPRKQ15262 1439 aa16.27■□□□□ 0.19
TRUB1-202ENST00000485065 MYO3AQ8NEV4 1616 aa16.27■□□□□ 0.19
TRUB1-202ENST00000485065 SLC4A1APQ9BWU0 796 aaKnown RBP16.26■□□□□ 0.19
TRUB1-202ENST00000485065 SUPT6HQ7KZ85 1726 aaKnown RBP16.25■□□□□ 0.19
TRUB1-202ENST00000485065 ATP1B4Q9UN42 357 aaPredicted RBP16.25■□□□□ 0.19
TRUB1-202ENST00000485065 ITSN2Q9NZM3 1697 aa16.24■□□□□ 0.19
TRUB1-202ENST00000485065 PREX2Q70Z35 1606 aa16.23■□□□□ 0.19
TRUB1-202ENST00000485065 SHANK2Q9UPX8 1470 aa16.23■□□□□ 0.19
TRUB1-202ENST00000485065 A2ML1A8K2U0 1454 aa16.21■□□□□ 0.19
TRUB1-202ENST00000485065 SAMD9LQ8IVG5 1584 aa16.2■□□□□ 0.18
TRUB1-202ENST00000485065 CLTCQ00610 1675 aaKnown RBP16.19■□□□□ 0.18
TRUB1-202ENST00000485065 AKT1S1Q96B36 256 aa16.19■□□□□ 0.18
TRUB1-202ENST00000485065 DNMT1P26358 1616 aaKnown RBP16.18■□□□□ 0.18
TRUB1-202ENST00000485065 SPAG9O60271 1321 aaKnown RBP16.18■□□□□ 0.18
TRUB1-202ENST00000485065 PLXNC1O60486 1568 aa16.17■□□□□ 0.18
TRUB1-202ENST00000485065 ALKQ9UM73 1620 aa16.16■□□□□ 0.18
TRUB1-202ENST00000485065 POLR1AO95602 1720 aaPredicted RBP16.15■□□□□ 0.18
TRUB1-202ENST00000485065 NEURL4Q96JN8 1562 aa16.15■□□□□ 0.18
TRUB1-202ENST00000485065 ZBTB12Q9Y330 459 aaPredicted RBP16.15■□□□□ 0.18
TRUB1-202ENST00000485065 A2MP01023 1474 aa16.15■□□□□ 0.18
TRUB1-202ENST00000485065 ARHGAP35Q9NRY4 1499 aa16.15■□□□□ 0.18
TRUB1-202ENST00000485065 GGT6Q6P531 493 aa16.14■□□□□ 0.17
TRUB1-202ENST00000485065 RGS17Q9UGC6 210 aaPredicted RBP16.14■□□□□ 0.17
TRUB1-202ENST00000485065 ANKLE2Q86XL3 938 aa16.13■□□□□ 0.17
TRUB1-202ENST00000485065 VWDEQ8N2E2 1590 aa16.13■□□□□ 0.17
TRUB1-202ENST00000485065 KIAA1107Q9UPP5 1409 aa16.12■□□□□ 0.17
TRUB1-202ENST00000485065 CDC42BPAQ5VT25 1732 aa16.12■□□□□ 0.17
TRUB1-202ENST00000485065 EHMT2Q96KQ7 1210 aa16.12■□□□□ 0.17
TRUB1-202ENST00000485065 ATP7AQ04656 1500 aa16.12■□□□□ 0.17
TRUB1-202ENST00000485065 LRRIQ1Q96JM4 1722 aa16.11■□□□□ 0.17
TRUB1-202ENST00000485065 MED14O60244 1454 aa16.11■□□□□ 0.17
TRUB1-202ENST00000485065 CCDC18Q5T9S5 1454 aa16.1■□□□□ 0.17
TRUB1-202ENST00000485065 HNRNPMP52272 730 aaKnown RBP eCLIP16.09■□□□□ 0.17
TRUB1-202ENST00000485065 THEMISQ8N1K5 641 aaPredicted RBP16.09■□□□□ 0.17
TRUB1-202ENST00000485065 PLEKHH2Q8IVE3 1493 aa16.09■□□□□ 0.17
TRUB1-202ENST00000485065 SYCP2Q9BX26 1530 aa16.09■□□□□ 0.17
TRUB1-202ENST00000485065 INO80Q9ULG1 1556 aaPredicted RBP16.09■□□□□ 0.17
TRUB1-202ENST00000485065 TNRQ92752 1358 aa16.08■□□□□ 0.16
TRUB1-202ENST00000485065 DEPDC5O75140 1603 aa16.08■□□□□ 0.16
TRUB1-202ENST00000485065 UBTFP17480 764 aaKnown RBP16.07■□□□□ 0.16
TRUB1-202ENST00000485065 REM2Q8IYK8 340 aaPredicted RBP16.07■□□□□ 0.16
TRUB1-202ENST00000485065 ZNF777Q9ULD5 760 aaPredicted RBP16.07■□□□□ 0.16
TRUB1-202ENST00000485065 GPATCH8Q9UKJ3 1502 aaKnown RBP16.06■□□□□ 0.16
TRUB1-202ENST00000485065 NPHP4O75161 1426 aaPredicted RBP16.06■□□□□ 0.16
TRUB1-202ENST00000485065 LRRC7Q96NW7 1537 aa16.04■□□□□ 0.16
TRUB1-202ENST00000485065 FAM135AQ9P2D6 1515 aa16.04■□□□□ 0.16
TRUB1-202ENST00000485065 CASKIN1Q8WXD9 1431 aa16.04■□□□□ 0.16
TRUB1-202ENST00000485065 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.04■□□□□ 0.16
TRUB1-202ENST00000485065 ADGBQ8N7X0 1667 aa16.04■□□□□ 0.16
TRUB1-202ENST00000485065 PZPP20742 1482 aa16.03■□□□□ 0.16
TRUB1-202ENST00000485065 NLRP1Q9C000 1473 aa16.03■□□□□ 0.16
TRUB1-202ENST00000485065 ZBTB22O15209 634 aa16.03■□□□□ 0.16
TRUB1-202ENST00000485065 RNF17Q9BXT8 1623 aaKnown RBP16.03■□□□□ 0.16
TRUB1-202ENST00000485065 FBXO31Q5XUX0 539 aaPredicted RBP16.02■□□□□ 0.16
TRUB1-202ENST00000485065 MIA2Q96PC5 1412 aa16.02■□□□□ 0.15
TRUB1-202ENST00000485065 SYNMO15061 1565 aa16.01■□□□□ 0.15
TRUB1-202ENST00000485065 SP7Q8TDD2 431 aaPredicted RBP16.01■□□□□ 0.15
TRUB1-202ENST00000485065 CFDP1Q9UEE9 299 aaPredicted RBP16.01■□□□□ 0.15
TRUB1-202ENST00000485065 DHX29Q7Z478 1369 aaKnown RBP16■□□□□ 0.15
TRUB1-202ENST00000485065 POTEAQ6S8J7 498 aa16■□□□□ 0.15
TRUB1-202ENST00000485065 PIP4P2Q8N4L2 257 aa16■□□□□ 0.15
TRUB1-202ENST00000485065 RTEL1-TNFRSF6BF6WH68 1400 aa16■□□□□ 0.15
TRUB1-202ENST00000485065 UGGT1Q9NYU2 1555 aa16■□□□□ 0.15
TRUB1-202ENST00000485065 IQGAP1P46940 1657 aa15.99■□□□□ 0.15
TRUB1-202ENST00000485065 STRCP1A6NGW2 1772 aa15.98■□□□□ 0.15
TRUB1-202ENST00000485065 KDM5DQ9BY66 1539 aa15.97■□□□□ 0.15
TRUB1-202ENST00000485065 FAM135BQ49AJ0 1406 aa15.96■□□□□ 0.15
TRUB1-202ENST00000485065 WASHC2CQ9Y4E1 1318 aa15.94■□□□□ 0.14
TRUB1-202ENST00000485065 KIF3BO15066 747 aa15.94■□□□□ 0.14
TRUB1-202ENST00000485065 FYCO1Q9BQS8 1478 aa15.93■□□□□ 0.14
TRUB1-202ENST00000485065 MBD5Q9P267 1494 aa15.93■□□□□ 0.14
TRUB1-202ENST00000485065 CCNB3Q8WWL7 1395 aa15.93■□□□□ 0.14
TRUB1-202ENST00000485065 PITPNM1O00562 1244 aa15.93■□□□□ 0.14
TRUB1-202ENST00000485065 ZC3H13Q5T200 1668 aaKnown RBP15.89■□□□□ 0.13
TRUB1-202ENST00000485065 RSPH4AQ5TD94 716 aa15.87■□□□□ 0.13
TRUB1-202ENST00000485065 FXR2P51116 673 aaKnown RBP eCLIP15.86■□□□□ 0.13
TRUB1-202ENST00000485065 XIRP1Q702N8 1843 aaKnown RBP15.86■□□□□ 0.13
TRUB1-202ENST00000485065 ZNF644Q9H582 1327 aaPredicted RBP15.86■□□□□ 0.13
TRUB1-202ENST00000485065 SCAF11Q99590 1463 aaKnown RBP15.85■□□□□ 0.13
TRUB1-202ENST00000485065 UPF1Q92900 1129 aaKnown RBP eCLIP15.84■□□□□ 0.13
TRUB1-202ENST00000485065 ARHGAP23Q9P227 1491 aa15.82■□□□□ 0.12
TRUB1-202ENST00000485065 SETD1AO15047 1707 aaKnown RBP15.82■□□□□ 0.12
TRUB1-202ENST00000485065 SLIT1O75093 1534 aa15.81■□□□□ 0.12
TRUB1-202ENST00000485065 LTKP29376 864 aa15.81■□□□□ 0.12
TRUB1-202ENST00000485065 MTUS2Q5JR59 1369 aa15.81■□□□□ 0.12
TRUB1-202ENST00000485065 ERVK-7P63135 1459 aa15.8■□□□□ 0.12
TRUB1-202ENST00000485065 CCDC141Q6ZP82 1450 aa15.8■□□□□ 0.12
TRUB1-202ENST00000485065 TXNDC2Q86VQ3 553 aa15.8■□□□□ 0.12
TRUB1-202ENST00000485065 LRRC9Q6ZRR7 1453 aa15.79■□□□□ 0.12
TRUB1-202ENST00000485065 ATXN8OSP0DMR3 200 aa15.79■□□□□ 0.12
TRUB1-202ENST00000485065 UBR1Q8IWV7 1749 aa15.79■□□□□ 0.12
TRUB1-202ENST00000485065 ROBO1Q9Y6N7 1651 aa15.79■□□□□ 0.12
TRUB1-202ENST00000485065 TIAM1Q13009 1591 aa15.79■□□□□ 0.12
TRUB1-202ENST00000485065 NCOA2Q15596 1464 aa15.78■□□□□ 0.12
TRUB1-202ENST00000485065 JCADQ9P266 1359 aa15.78■□□□□ 0.12
TRUB1-202ENST00000485065 EID1Q9Y6B2 187 aa15.78■□□□□ 0.12
TRUB1-202ENST00000485065 ABCC3O15438 1527 aa15.78■□□□□ 0.12
TRUB1-202ENST00000485065 TMEM94Q12767 1356 aa15.77■□□□□ 0.12
TRUB1-202ENST00000485065 KCNA6P17658 529 aa15.76■□□□□ 0.11
TRUB1-202ENST00000485065 ZNF772Q68DY9 489 aaPredicted RBP15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms