RNA–Protein interactions for RNA: ENST00000484990.1

COL13A1-209, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 2

Gene COL13A1, Length 360 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-209ENST00000484990 TIAM1Q13009 1591 aa18.44■□□□□ 0.54
COL13A1-209ENST00000484990 TSPY4P0CV99 314 aa18.44■□□□□ 0.54
COL13A1-209ENST00000484990 TSPY10P0CW01 314 aa18.44■□□□□ 0.54
COL13A1-209ENST00000484990 FBXO31Q5XUX0 539 aaPredicted RBP18.44■□□□□ 0.54
COL13A1-209ENST00000484990 TOM1O60784 492 aa18.43■□□□□ 0.54
COL13A1-209ENST00000484990 ANKLE2Q86XL3 938 aa18.43■□□□□ 0.54
COL13A1-209ENST00000484990 THEMISQ8N1K5 641 aaPredicted RBP18.43■□□□□ 0.54
COL13A1-209ENST00000484990 TNRQ92752 1358 aa18.42■□□□□ 0.54
COL13A1-209ENST00000484990 DNMT1P26358 1616 aaKnown RBP18.42■□□□□ 0.54
COL13A1-209ENST00000484990 SCAF1Q9H7N4 1312 aaKnown RBP18.4■□□□□ 0.54
COL13A1-209ENST00000484990 CCDC141Q6ZP82 1450 aa18.39■□□□□ 0.54
COL13A1-209ENST00000484990 FAM135AQ9P2D6 1515 aa18.38■□□□□ 0.53
COL13A1-209ENST00000484990 PIP4K2BP78356 416 aa18.37■□□□□ 0.53
COL13A1-209ENST00000484990 MIA2Q96PC5 1412 aa18.37■□□□□ 0.53
COL13A1-209ENST00000484990 PZPP20742 1482 aa18.37■□□□□ 0.53
COL13A1-209ENST00000484990 KDM5DQ9BY66 1539 aa18.36■□□□□ 0.53
COL13A1-209ENST00000484990 CPS1P31327 1500 aa18.35■□□□□ 0.53
COL13A1-209ENST00000484990 NCOA2Q15596 1464 aa18.35■□□□□ 0.53
COL13A1-209ENST00000484990 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.35■□□□□ 0.53
COL13A1-209ENST00000484990 CAMSAP2Q08AD1 1489 aa18.34■□□□□ 0.53
COL13A1-209ENST00000484990 SHANK2Q9UPX8 1470 aa18.34■□□□□ 0.53
COL13A1-209ENST00000484990 HSPA1LP34931 641 aa18.34■□□□□ 0.53
COL13A1-209ENST00000484990 POLR1AO95602 1720 aaPredicted RBP18.33■□□□□ 0.52
COL13A1-209ENST00000484990 NLRP1Q9C000 1473 aa18.33■□□□□ 0.52
COL13A1-209ENST00000484990 UGGT1Q9NYU2 1555 aa18.31■□□□□ 0.52
COL13A1-209ENST00000484990 NPHP4O75161 1426 aaPredicted RBP18.29■□□□□ 0.52
COL13A1-209ENST00000484990 ARHGEF5Q12774 1597 aa18.29■□□□□ 0.52
COL13A1-209ENST00000484990 NEURL4Q96JN8 1562 aa18.29■□□□□ 0.52
COL13A1-209ENST00000484990 MED14O60244 1454 aa18.27■□□□□ 0.52
COL13A1-209ENST00000484990 DEPDC5O75140 1603 aa18.25■□□□□ 0.51
COL13A1-209ENST00000484990 VWDEQ8N2E2 1590 aa18.23■□□□□ 0.51
COL13A1-209ENST00000484990 PHF23Q9BUL5 403 aaPredicted RBP18.22■□□□□ 0.51
COL13A1-209ENST00000484990 LRRC9Q6ZRR7 1453 aa18.21■□□□□ 0.51
COL13A1-209ENST00000484990 CFAP65Q6ZU64 1925 aaKnown RBP18.21■□□□□ 0.51
COL13A1-209ENST00000484990 IQGAP1P46940 1657 aa18.19■□□□□ 0.5
COL13A1-209ENST00000484990 ZC3H13Q5T200 1668 aaKnown RBP18.19■□□□□ 0.5
COL13A1-209ENST00000484990 MED1Q15648 1581 aaPredicted RBP18.19■□□□□ 0.5
COL13A1-209ENST00000484990 MAST1Q9Y2H9 1570 aa18.19■□□□□ 0.5
COL13A1-209ENST00000484990 RNF17Q9BXT8 1623 aaKnown RBP18.19■□□□□ 0.5
COL13A1-209ENST00000484990 ABCC3O15438 1527 aa18.18■□□□□ 0.5
COL13A1-209ENST00000484990 VPS8Q8N3P4 1428 aa18.18■□□□□ 0.5
COL13A1-209ENST00000484990 MYOM3Q5VTT5 1437 aa18.17■□□□□ 0.5
COL13A1-209ENST00000484990 EIF2AK4Q9P2K8 1649 aaKnown RBP18.17■□□□□ 0.5
COL13A1-209ENST00000484990 TXNDC2Q86VQ3 553 aa18.17■□□□□ 0.5
COL13A1-209ENST00000484990 EID1Q9Y6B2 187 aa18.17■□□□□ 0.5
COL13A1-209ENST00000484990 ERVK-7P63135 1459 aa18.17■□□□□ 0.5
COL13A1-209ENST00000484990 KANK4Q5T7N3 995 aaPredicted RBP18.16■□□□□ 0.5
COL13A1-209ENST00000484990 LRRC7Q96NW7 1537 aa18.15■□□□□ 0.5
COL13A1-209ENST00000484990 SENP3Q9H4L4 574 aaPredicted RBP18.14■□□□□ 0.49
COL13A1-209ENST00000484990 MAP3K1Q13233 1512 aa18.13■□□□□ 0.49
COL13A1-209ENST00000484990 DUOX2Q9NRD8 1548 aa18.13■□□□□ 0.49
COL13A1-209ENST00000484990 LOC105371045A0A1W2PR82 267 aa18.13■□□□□ 0.49
COL13A1-209ENST00000484990 LTKP29376 864 aa18.13■□□□□ 0.49
COL13A1-209ENST00000484990 STAG3Q9UJ98 1225 aa18.13■□□□□ 0.49
COL13A1-209ENST00000484990 APLP2Q06481 763 aa18.12■□□□□ 0.49
COL13A1-209ENST00000484990 SCAF11Q99590 1463 aaKnown RBP18.12■□□□□ 0.49
COL13A1-209ENST00000484990 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.11■□□□□ 0.49
COL13A1-209ENST00000484990 RRP7BPQ9NSQ0 103 aa18.11■□□□□ 0.49
COL13A1-209ENST00000484990 ARHGAP31Q2M1Z3 1444 aa18.11■□□□□ 0.49
COL13A1-209ENST00000484990 ALKQ9UM73 1620 aa18.11■□□□□ 0.49
COL13A1-209ENST00000484990 STRCP1A6NGW2 1772 aa18.11■□□□□ 0.49
COL13A1-209ENST00000484990 CEP152O94986 1710 aa18.1■□□□□ 0.49
COL13A1-209ENST00000484990 UBR1Q8IWV7 1749 aa18.1■□□□□ 0.49
COL13A1-209ENST00000484990 SYNMO15061 1565 aa18.09■□□□□ 0.49
COL13A1-209ENST00000484990 KANK1Q14678 1352 aa18.09■□□□□ 0.49
COL13A1-209ENST00000484990 KIF15Q9NS87 1388 aa18.09■□□□□ 0.49
COL13A1-209ENST00000484990 MROH1Q8NDA8 1641 aa18.09■□□□□ 0.49
COL13A1-209ENST00000484990 ARHGAP23Q9P227 1491 aa18.07■□□□□ 0.48
COL13A1-209ENST00000484990 SLIT1O75093 1534 aa18.07■□□□□ 0.48
COL13A1-209ENST00000484990 ERBINQ96RT1 1412 aa18.06■□□□□ 0.48
COL13A1-209ENST00000484990 TMEM2Q9UHN6 1383 aa18.04■□□□□ 0.48
COL13A1-209ENST00000484990 ABCC5O15440 1437 aa18.04■□□□□ 0.48
COL13A1-209ENST00000484990 IDI1Q13907 227 aa18.03■□□□□ 0.48
COL13A1-209ENST00000484990 PRDM15P57071 1507 aaPredicted RBP18.03■□□□□ 0.48
COL13A1-209ENST00000484990 KCNA6P17658 529 aa18.02■□□□□ 0.48
COL13A1-209ENST00000484990 PROSER2Q86WR7 435 aaPredicted RBP18.01■□□□□ 0.47
COL13A1-209ENST00000484990 CHIC2Q9UKJ5 165 aa18.01■□□□□ 0.47
COL13A1-209ENST00000484990 ANKRD30AQ9BXX3 1397 aa18.01■□□□□ 0.47
COL13A1-209ENST00000484990 FAM135BQ49AJ0 1406 aa18■□□□□ 0.47
COL13A1-209ENST00000484990 DAPK1P53355 1430 aa17.99■□□□□ 0.47
COL13A1-209ENST00000484990 PTPN23Q9H3S7 1636 aa17.99■□□□□ 0.47
COL13A1-209ENST00000484990 PIK3C2BO00750 1634 aa17.98■□□□□ 0.47
COL13A1-209ENST00000484990 BCANQ96GW7 911 aa17.98■□□□□ 0.47
COL13A1-209ENST00000484990 SLC52A1Q9NWF4 448 aa17.98■□□□□ 0.47
COL13A1-209ENST00000484990 TMEM94Q12767 1356 aa17.97■□□□□ 0.47
COL13A1-209ENST00000484990 SLC26A8Q96RN1 970 aa17.97■□□□□ 0.47
COL13A1-209ENST00000484990 RGS17Q9UGC6 210 aaPredicted RBP17.97■□□□□ 0.47
COL13A1-209ENST00000484990 XIRP1Q702N8 1843 aaKnown RBP17.97■□□□□ 0.47
COL13A1-209ENST00000484990 EFCAB6Q5THR3 1501 aa17.97■□□□□ 0.47
COL13A1-209ENST00000484990 CROCC2H7BZ55 1655 aa17.96■□□□□ 0.47
COL13A1-209ENST00000484990 HDGFP51858 240 aaKnown RBP17.96■□□□□ 0.47
COL13A1-209ENST00000484990 KDM5AP29375 1690 aaKnown RBP17.96■□□□□ 0.47
COL13A1-209ENST00000484990 LMTK2Q8IWU2 1503 aa17.94■□□□□ 0.46
COL13A1-209ENST00000484990 FGD6Q6ZV73 1430 aa17.94■□□□□ 0.46
COL13A1-209ENST00000484990 TET3O43151 1660 aa17.91■□□□□ 0.46
COL13A1-209ENST00000484990 RBM33Q96EV2 1170 aaKnown RBP17.91■□□□□ 0.46
COL13A1-209ENST00000484990 NOS1P29475 1434 aa17.9■□□□□ 0.46
COL13A1-209ENST00000484990 SLAIN2Q9P270 581 aa17.9■□□□□ 0.46
COL13A1-209ENST00000484990 MSH6P52701 1360 aa17.9■□□□□ 0.46
COL13A1-209ENST00000484990 PPP1R15AO75807 674 aaPredicted RBP17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms