RNA–Protein interactions for RNA: ENST00000484763.1

VCPKMT-203, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,849 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-203ENST00000484763 BCORL1Q5H9F3 1711 aa30.09■■■□□ 2.41
VCPKMT-203ENST00000484763 ARHGEF40Q8TER5 1519 aa30.09■■■□□ 2.41
VCPKMT-203ENST00000484763 NUP155O75694 1391 aa30.08■■■□□ 2.41
VCPKMT-203ENST00000484763 IQGAP3Q86VI3 1631 aa30.06■■■□□ 2.4
VCPKMT-203ENST00000484763 MPHOSPH9Q99550 1183 aa30.06■■■□□ 2.4
VCPKMT-203ENST00000484763 REREQ9P2R6 1566 aa30.05■■■□□ 2.4
VCPKMT-203ENST00000484763 RNF17Q9BXT8 1623 aaKnown RBP30.04■■■□□ 2.4
VCPKMT-203ENST00000484763 ATP10AO60312 1499 aa30.04■■■□□ 2.4
VCPKMT-203ENST00000484763 FAM135AQ9P2D6 1515 aa30.03■■■□□ 2.4
VCPKMT-203ENST00000484763 PRDM15P57071 1507 aaPredicted RBP30.02■■■□□ 2.4
VCPKMT-203ENST00000484763 KIF3BO15066 747 aa30.02■■■□□ 2.4
VCPKMT-203ENST00000484763 SLC4A1APQ9BWU0 796 aaKnown RBP30.02■■■□□ 2.4
VCPKMT-203ENST00000484763 MROH1Q8NDA8 1641 aa30■■■□□ 2.39
VCPKMT-203ENST00000484763 ZEB1P37275 1124 aaPredicted RBP30■■■□□ 2.39
VCPKMT-203ENST00000484763 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.99■■■□□ 2.39
VCPKMT-203ENST00000484763 VWDEQ8N2E2 1590 aa29.96■■■□□ 2.39
VCPKMT-203ENST00000484763 KANK1Q14678 1352 aa29.94■■■□□ 2.38
VCPKMT-203ENST00000484763 AGLP35573 1532 aa29.94■■■□□ 2.38
VCPKMT-203ENST00000484763 PKD2Q13563 968 aa29.89■■■□□ 2.38
VCPKMT-203ENST00000484763 SIGLEC1Q9BZZ2 1709 aa29.89■■■□□ 2.38
VCPKMT-203ENST00000484763 TET3O43151 1660 aa29.89■■■□□ 2.37
VCPKMT-203ENST00000484763 FOXD1Q16676 465 aa29.86■■■□□ 2.37
VCPKMT-203ENST00000484763 CEP152O94986 1710 aa29.85■■■□□ 2.37
VCPKMT-203ENST00000484763 LMTK2Q8IWU2 1503 aa29.85■■■□□ 2.37
VCPKMT-203ENST00000484763 ANKRD30BQ9BXX2 1392 aa29.84■■■□□ 2.37
VCPKMT-203ENST00000484763 GGT6Q6P531 493 aa29.84■■■□□ 2.37
VCPKMT-203ENST00000484763 ZC3H13Q5T200 1668 aaKnown RBP29.83■■■□□ 2.37
VCPKMT-203ENST00000484763 E9PCH4 1651 aa29.81■■■□□ 2.36
VCPKMT-203ENST00000484763 ABCC3O15438 1527 aa29.8■■■□□ 2.36
VCPKMT-203ENST00000484763 EFCAB6Q5THR3 1501 aa29.8■■■□□ 2.36
VCPKMT-203ENST00000484763 SIN3AQ96ST3 1273 aa29.79■■■□□ 2.36
VCPKMT-203ENST00000484763 CAMSAP1Q5T5Y3 1602 aa29.75■■■□□ 2.35
VCPKMT-203ENST00000484763 WASHC2CQ9Y4E1 1318 aa29.74■■■□□ 2.35
VCPKMT-203ENST00000484763 NEUROD1Q13562 356 aa29.73■■■□□ 2.35
VCPKMT-203ENST00000484763 PPP6R1Q9UPN7 881 aa29.71■■■□□ 2.35
VCPKMT-203ENST00000484763 SPHKAPQ2M3C7 1700 aa29.7■■■□□ 2.35
VCPKMT-203ENST00000484763 RPRD2Q5VT52 1461 aaKnown RBP29.7■■■□□ 2.34
VCPKMT-203ENST00000484763 ARID4BQ4LE39 1312 aaPredicted RBP29.67■■■□□ 2.34
VCPKMT-203ENST00000484763 PLA2R1Q13018 1463 aa29.66■■■□□ 2.34
VCPKMT-203ENST00000484763 TIMELESSQ9UNS1 1208 aa29.66■■■□□ 2.34
VCPKMT-203ENST00000484763 TRPM2O94759 1503 aa29.65■■■□□ 2.34
VCPKMT-203ENST00000484763 CLTCQ00610 1675 aaKnown RBP29.65■■■□□ 2.34
VCPKMT-203ENST00000484763 PTPRTO14522 1441 aa29.64■■■□□ 2.34
VCPKMT-203ENST00000484763 NPATQ14207 1427 aa29.64■■■□□ 2.34
VCPKMT-203ENST00000484763 ARHGAP31Q2M1Z3 1444 aa29.64■■■□□ 2.33
VCPKMT-203ENST00000484763 TONSLQ96HA7 1378 aa29.63■■■□□ 2.33
VCPKMT-203ENST00000484763 CCDC144AA2RUR9 1427 aa29.63■■■□□ 2.33
VCPKMT-203ENST00000484763 MLECQ14165 292 aa29.63■■■□□ 2.33
VCPKMT-203ENST00000484763 CFAP65Q6ZU64 1925 aaKnown RBP29.55■■■□□ 2.32
VCPKMT-203ENST00000484763 CLTCL1P53675 1640 aa29.55■■■□□ 2.32
VCPKMT-203ENST00000484763 CNTLNQ9NXG0 1405 aa29.54■■■□□ 2.32
VCPKMT-203ENST00000484763 ESF1Q9H501 851 aaKnown RBP29.54■■■□□ 2.32
VCPKMT-203ENST00000484763 PREX1Q8TCU6 1659 aa29.53■■■□□ 2.32
VCPKMT-203ENST00000484763 MROH2AA6NES4 1674 aa29.52■■■□□ 2.32
VCPKMT-203ENST00000484763 NOS1P29475 1434 aa29.51■■■□□ 2.31
VCPKMT-203ENST00000484763 FER1L4A9Z1Z3 1794 aa29.51■■■□□ 2.31
VCPKMT-203ENST00000484763 SYNMO15061 1565 aa29.47■■■□□ 2.31
VCPKMT-203ENST00000484763 UGGT1Q9NYU2 1555 aa29.47■■■□□ 2.31
VCPKMT-203ENST00000484763 ERVK-7P63135 1459 aa29.45■■■□□ 2.31
VCPKMT-203ENST00000484763 L3MBTL2Q969R5 705 aa29.45■■■□□ 2.3
VCPKMT-203ENST00000484763 PIK3C2BO00750 1634 aa29.44■■■□□ 2.3
VCPKMT-203ENST00000484763 KIF1BO60333 1816 aa29.44■■■□□ 2.3
VCPKMT-203ENST00000484763 ZMYM3Q14202 1370 aa29.43■■■□□ 2.3
VCPKMT-203ENST00000484763 SPATA31D1Q6ZQQ2 1576 aa29.43■■■□□ 2.3
VCPKMT-203ENST00000484763 NEURL4Q96JN8 1562 aa29.43■■■□□ 2.3
VCPKMT-203ENST00000484763 PPP1R15AO75807 674 aaPredicted RBP29.42■■■□□ 2.3
VCPKMT-203ENST00000484763 SPATA31E1Q6ZUB1 1445 aa29.4■■■□□ 2.3
VCPKMT-203ENST00000484763 MADDQ8WXG6 1647 aa29.38■■■□□ 2.29
VCPKMT-203ENST00000484763 ADAMTSL3P82987 1691 aa29.37■■■□□ 2.29
VCPKMT-203ENST00000484763 FBXO31Q5XUX0 539 aaPredicted RBP29.36■■■□□ 2.29
VCPKMT-203ENST00000484763 C3P01024 1663 aa29.36■■■□□ 2.29
VCPKMT-203ENST00000484763 ADGRB3O60242 1522 aa29.35■■■□□ 2.29
VCPKMT-203ENST00000484763 SLC52A1Q9NWF4 448 aa29.34■■■□□ 2.29
VCPKMT-203ENST00000484763 RIMS1Q86UR5 1692 aaKnown RBP29.33■■■□□ 2.29
VCPKMT-203ENST00000484763 RGL3Q3MIN7 710 aa29.32■■■□□ 2.28
VCPKMT-203ENST00000484763 DCAF11Q8TEB1 546 aa29.27■■■□□ 2.28
VCPKMT-203ENST00000484763 IDI1Q13907 227 aa29.26■■■□□ 2.27
VCPKMT-203ENST00000484763 UHRF1BP1Q6BDS2 1440 aa29.25■■■□□ 2.27
VCPKMT-203ENST00000484763 TNRQ92752 1358 aa29.25■■■□□ 2.27
VCPKMT-203ENST00000484763 IFT172Q9UG01 1749 aa29.25■■■□□ 2.27
VCPKMT-203ENST00000484763 TMEM131LA2VDJ0 1609 aa29.24■■■□□ 2.27
VCPKMT-203ENST00000484763 CHGAP10645 457 aaKnown RBP29.23■■■□□ 2.27
VCPKMT-203ENST00000484763 MYO5BQ9ULV0 1848 aa29.22■■■□□ 2.27
VCPKMT-203ENST00000484763 KDM2AQ9Y2K7 1162 aa29.21■■■□□ 2.27
VCPKMT-203ENST00000484763 CEBPAP49715 358 aaPredicted RBP29.2■■■□□ 2.27
VCPKMT-203ENST00000484763 NBPF8Q3BBV2 869 aa29.2■■■□□ 2.26
VCPKMT-203ENST00000484763 PPLO60437 1756 aa29.19■■■□□ 2.26
VCPKMT-203ENST00000484763 STAC3Q96MF2 364 aa29.19■■■□□ 2.26
VCPKMT-203ENST00000484763 PRAG1Q86YV5 1406 aa29.19■■■□□ 2.26
VCPKMT-203ENST00000484763 ZNF326Q5BKZ1 582 aaKnown RBP29.17■■■□□ 2.26
VCPKMT-203ENST00000484763 MYOM2P54296 1465 aa29.17■■■□□ 2.26
VCPKMT-203ENST00000484763 KDM5AP29375 1690 aaKnown RBP29.16■■■□□ 2.26
VCPKMT-203ENST00000484763 NLRP1Q9C000 1473 aa29.16■■■□□ 2.26
VCPKMT-203ENST00000484763 RPGRIP1LQ68CZ1 1315 aa29.15■■■□□ 2.26
VCPKMT-203ENST00000484763 NEXMIFQ5QGS0 1516 aa29.13■■■□□ 2.25
VCPKMT-203ENST00000484763 RALGAPBQ86X10 1494 aa29.13■■■□□ 2.25
VCPKMT-203ENST00000484763 TRPM1Q7Z4N2 1603 aa29.12■■■□□ 2.25
VCPKMT-203ENST00000484763 A2ML1A8K2U0 1454 aa29.12■■■□□ 2.25
VCPKMT-203ENST00000484763 PLPPR3Q6T4P5 718 aa29.12■■■□□ 2.25
VCPKMT-203ENST00000484763 STAG3Q9UJ98 1225 aa29.12■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms