RNA–Protein interactions for RNA: ENST00000484556.1

DDR1-245, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 1,038 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-245ENST00000484556 KIAA1107Q9UPP5 1409 aa29.74■■■□□ 2.35
DDR1-245ENST00000484556 FBXO31Q5XUX0 539 aaPredicted RBP29.74■■■□□ 2.35
DDR1-245ENST00000484556 PLEKHH2Q8IVE3 1493 aa29.73■■■□□ 2.35
DDR1-245ENST00000484556 STRCP1A6NGW2 1772 aa29.72■■■□□ 2.35
DDR1-245ENST00000484556 RGS17Q9UGC6 210 aaPredicted RBP29.71■■■□□ 2.35
DDR1-245ENST00000484556 RNF17Q9BXT8 1623 aaKnown RBP29.7■■■□□ 2.34
DDR1-245ENST00000484556 NPHP4O75161 1426 aaPredicted RBP29.7■■■□□ 2.34
DDR1-245ENST00000484556 ANKLE2Q86XL3 938 aa29.69■■■□□ 2.34
DDR1-245ENST00000484556 CFDP1Q9UEE9 299 aaPredicted RBP29.68■■■□□ 2.34
DDR1-245ENST00000484556 IQGAP1P46940 1657 aa29.68■■■□□ 2.34
DDR1-245ENST00000484556 PZPP20742 1482 aa29.67■■■□□ 2.34
DDR1-245ENST00000484556 DEPDC5O75140 1603 aa29.67■■■□□ 2.34
DDR1-245ENST00000484556 MED14O60244 1454 aa29.66■■■□□ 2.34
DDR1-245ENST00000484556 LRRC7Q96NW7 1537 aa29.66■■■□□ 2.34
DDR1-245ENST00000484556 FYCO1Q9BQS8 1478 aa29.65■■■□□ 2.34
DDR1-245ENST00000484556 UGGT1Q9NYU2 1555 aa29.64■■■□□ 2.33
DDR1-245ENST00000484556 KDM5DQ9BY66 1539 aa29.63■■■□□ 2.33
DDR1-245ENST00000484556 SYNMO15061 1565 aa29.63■■■□□ 2.33
DDR1-245ENST00000484556 CCNB3Q8WWL7 1395 aa29.62■■■□□ 2.33
DDR1-245ENST00000484556 THEMISQ8N1K5 641 aaPredicted RBP29.59■■■□□ 2.33
DDR1-245ENST00000484556 FAM135AQ9P2D6 1515 aa29.59■■■□□ 2.33
DDR1-245ENST00000484556 NLRP1Q9C000 1473 aa29.57■■■□□ 2.32
DDR1-245ENST00000484556 ZNF644Q9H582 1327 aaPredicted RBP29.57■■■□□ 2.32
DDR1-245ENST00000484556 DHX29Q7Z478 1369 aaKnown RBP29.56■■■□□ 2.32
DDR1-245ENST00000484556 MIA2Q96PC5 1412 aa29.55■■■□□ 2.32
DDR1-245ENST00000484556 KIF3BO15066 747 aa29.55■■■□□ 2.32
DDR1-245ENST00000484556 MBD5Q9P267 1494 aa29.54■■■□□ 2.32
DDR1-245ENST00000484556 WASHC2CQ9Y4E1 1318 aa29.51■■■□□ 2.32
DDR1-245ENST00000484556 RTEL1-TNFRSF6BF6WH68 1400 aa29.51■■■□□ 2.31
DDR1-245ENST00000484556 TIAM1Q13009 1591 aa29.51■■■□□ 2.31
DDR1-245ENST00000484556 POTEAQ6S8J7 498 aa29.5■■■□□ 2.31
DDR1-245ENST00000484556 SETD1AO15047 1707 aaKnown RBP29.5■■■□□ 2.31
DDR1-245ENST00000484556 ZC3H13Q5T200 1668 aaKnown RBP29.5■■■□□ 2.31
DDR1-245ENST00000484556 XIRP1Q702N8 1843 aaKnown RBP29.47■■■□□ 2.31
DDR1-245ENST00000484556 MTUS2Q5JR59 1369 aa29.43■■■□□ 2.3
DDR1-245ENST00000484556 CCDC141Q6ZP82 1450 aa29.38■■■□□ 2.29
DDR1-245ENST00000484556 UBR1Q8IWV7 1749 aa29.36■■■□□ 2.29
DDR1-245ENST00000484556 CHIC1Q5VXU3 224 aa29.34■■■□□ 2.29
DDR1-245ENST00000484556 ABCC3O15438 1527 aa29.32■■■□□ 2.28
DDR1-245ENST00000484556 EHBP1L1Q8N3D4 1523 aa29.32■■■□□ 2.28
DDR1-245ENST00000484556 ERVK-7P63135 1459 aa29.32■■■□□ 2.28
DDR1-245ENST00000484556 SCAF11Q99590 1463 aaKnown RBP29.32■■■□□ 2.28
DDR1-245ENST00000484556 FAM135BQ49AJ0 1406 aa29.3■■■□□ 2.28
DDR1-245ENST00000484556 CAMSAP2Q08AD1 1489 aa29.29■■■□□ 2.28
DDR1-245ENST00000484556 ROBO1Q9Y6N7 1651 aa29.29■■■□□ 2.28
DDR1-245ENST00000484556 CFAP65Q6ZU64 1925 aaKnown RBP29.28■■■□□ 2.28
DDR1-245ENST00000484556 NCOA2Q15596 1464 aa29.26■■■□□ 2.27
DDR1-245ENST00000484556 CEP152O94986 1710 aa29.25■■■□□ 2.27
DDR1-245ENST00000484556 LTKP29376 864 aa29.24■■■□□ 2.27
DDR1-245ENST00000484556 CEP162Q5TB80 1403 aa29.23■■■□□ 2.27
DDR1-245ENST00000484556 ARHGAP23Q9P227 1491 aa29.22■■■□□ 2.27
DDR1-245ENST00000484556 SLIT1O75093 1534 aa29.2■■■□□ 2.27
DDR1-245ENST00000484556 TXNDC2Q86VQ3 553 aa29.2■■■□□ 2.26
DDR1-245ENST00000484556 MROH1Q8NDA8 1641 aa29.19■■■□□ 2.26
DDR1-245ENST00000484556 TMEM94Q12767 1356 aa29.18■■■□□ 2.26
DDR1-245ENST00000484556 ARHGEF5Q12774 1597 aa29.17■■■□□ 2.26
DDR1-245ENST00000484556 MAP3K1Q13233 1512 aa29.16■■■□□ 2.26
DDR1-245ENST00000484556 EIF2AK4Q9P2K8 1649 aaKnown RBP29.14■■■□□ 2.26
DDR1-245ENST00000484556 RBM33Q96EV2 1170 aaKnown RBP29.14■■■□□ 2.26
DDR1-245ENST00000484556 PHLPP1O60346 1717 aa29.14■■■□□ 2.25
DDR1-245ENST00000484556 RSPH4AQ5TD94 716 aa29.13■■■□□ 2.25
DDR1-245ENST00000484556 PIK3C2BO00750 1634 aa29.1■■■□□ 2.25
DDR1-245ENST00000484556 LRRC9Q6ZRR7 1453 aa29.1■■■□□ 2.25
DDR1-245ENST00000484556 TSPY4P0CV99 314 aa29.09■■■□□ 2.25
DDR1-245ENST00000484556 TSPY10P0CW01 314 aa29.09■■■□□ 2.25
DDR1-245ENST00000484556 UPF1Q92900 1129 aaKnown RBP eCLIP29.09■■■□□ 2.25
DDR1-245ENST00000484556 EID1Q9Y6B2 187 aa29.09■■■□□ 2.25
DDR1-245ENST00000484556 MAST1Q9Y2H9 1570 aa29.06■■■□□ 2.24
DDR1-245ENST00000484556 JCADQ9P266 1359 aa29.04■■■□□ 2.24
DDR1-245ENST00000484556 PROSER2Q86WR7 435 aaPredicted RBP29.04■■■□□ 2.24
DDR1-245ENST00000484556 TRIM52Q96A61 297 aa29.03■■■□□ 2.24
DDR1-245ENST00000484556 TMEM2Q9UHN6 1383 aa29.02■■■□□ 2.24
DDR1-245ENST00000484556 LRP6O75581 1613 aa29.02■■■□□ 2.24
DDR1-245ENST00000484556 PRDM15P57071 1507 aaPredicted RBP29.01■■■□□ 2.23
DDR1-245ENST00000484556 KCNA6P17658 529 aa29.01■■■□□ 2.23
DDR1-245ENST00000484556 COL16A1Q07092 1604 aaPredicted RBP29■■■□□ 2.23
DDR1-245ENST00000484556 SLC26A8Q96RN1 970 aa28.99■■■□□ 2.23
DDR1-245ENST00000484556 NWD1Q149M9 1564 aa28.98■■■□□ 2.23
DDR1-245ENST00000484556 TET3O43151 1660 aa28.97■■■□□ 2.23
DDR1-245ENST00000484556 MSH6P52701 1360 aa28.96■■■□□ 2.23
DDR1-245ENST00000484556 NKTRP30414 1462 aaKnown RBP28.96■■■□□ 2.23
DDR1-245ENST00000484556 ARHGAP31Q2M1Z3 1444 aa28.95■■■□□ 2.23
DDR1-245ENST00000484556 EFCAB6Q5THR3 1501 aa28.95■■■□□ 2.23
DDR1-245ENST00000484556 STAG3Q9UJ98 1225 aa28.95■■■□□ 2.22
DDR1-245ENST00000484556 MEX3CQ5U5Q3 659 aaKnown RBP28.93■■■□□ 2.22
DDR1-245ENST00000484556 SLAIN2Q9P270 581 aa28.93■■■□□ 2.22
DDR1-245ENST00000484556 DUOX2Q9NRD8 1548 aa28.91■■■□□ 2.22
DDR1-245ENST00000484556 KDM5AP29375 1690 aaKnown RBP28.91■■■□□ 2.22
DDR1-245ENST00000484556 ZNF772Q68DY9 489 aaPredicted RBP28.89■■■□□ 2.22
DDR1-245ENST00000484556 SPATA31A6Q5VVP1 1343 aa28.86■■■□□ 2.21
DDR1-245ENST00000484556 SHPRHQ149N8 1683 aa28.84■■■□□ 2.21
DDR1-245ENST00000484556 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.83■■■□□ 2.21
DDR1-245ENST00000484556 FGD6Q6ZV73 1430 aa28.83■■■□□ 2.21
DDR1-245ENST00000484556 IDI1Q13907 227 aa28.82■■■□□ 2.2
DDR1-245ENST00000484556 RXRBP28702 533 aa28.81■■■□□ 2.2
DDR1-245ENST00000484556 BCANQ96GW7 911 aa28.81■■■□□ 2.2
DDR1-245ENST00000484556 SRCAPQ6ZRS2 3230 aa28.81■■■□□ 2.2
DDR1-245ENST00000484556 ADGRB3O60242 1522 aa28.8■■■□□ 2.2
DDR1-245ENST00000484556 CHD2O14647 1828 aaKnown RBP28.8■■■□□ 2.2
DDR1-245ENST00000484556 KIF15Q9NS87 1388 aa28.78■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms