RNA–Protein interactions for RNA: ENST00000484453.1

RTKN-209, Transcript of rhotekin, humanhuman

TSL 1 (best)

Gene RTKN, Length 820 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTKN-209ENST00000484453 PREX1Q8TCU6 1659 aa34.1■■■■□ 3.05
RTKN-209ENST00000484453 SETD1BQ9UPS6 1966 aaKnown RBP34.09■■■■□ 3.05
RTKN-209ENST00000484453 RRP7BPQ9NSQ0 103 aa34.07■■■■□ 3.04
RTKN-209ENST00000484453 ANKRD30AQ9BXX3 1397 aa34.07■■■■□ 3.04
RTKN-209ENST00000484453 ADGRL2O95490 1459 aa34.06■■■■□ 3.04
RTKN-209ENST00000484453 CEP152O94986 1710 aa34.05■■■■□ 3.04
RTKN-209ENST00000484453 KDM5DQ9BY66 1539 aa34.04■■■■□ 3.04
RTKN-209ENST00000484453 ZC3H13Q5T200 1668 aaKnown RBP34.03■■■■□ 3.04
RTKN-209ENST00000484453 ERBINQ96RT1 1412 aa34.02■■■■□ 3.04
RTKN-209ENST00000484453 MROH1Q8NDA8 1641 aa34.01■■■■□ 3.04
RTKN-209ENST00000484453 FAM135AQ9P2D6 1515 aa34.01■■■■□ 3.04
RTKN-209ENST00000484453 NCOA1Q15788 1441 aa34.01■■■■□ 3.03
RTKN-209ENST00000484453 RRBP1Q9P2E9 1410 aaKnown RBP33.99■■■■□ 3.03
RTKN-209ENST00000484453 PPP6R1Q9UPN7 881 aa33.99■■■■□ 3.03
RTKN-209ENST00000484453 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP33.98■■■■□ 3.03
RTKN-209ENST00000484453 DEPDC5O75140 1603 aa33.97■■■■□ 3.03
RTKN-209ENST00000484453 PTPRKQ15262 1439 aa33.97■■■■□ 3.03
RTKN-209ENST00000484453 ZMYM3Q14202 1370 aa33.97■■■■□ 3.03
RTKN-209ENST00000484453 ITGAEP38570 1179 aa33.96■■■■□ 3.03
RTKN-209ENST00000484453 CFAP65Q6ZU64 1925 aaKnown RBP33.94■■■■□ 3.02
RTKN-209ENST00000484453 PRDM15P57071 1507 aaPredicted RBP33.93■■■■□ 3.02
RTKN-209ENST00000484453 CAMSAP1Q5T5Y3 1602 aa33.91■■■■□ 3.02
RTKN-209ENST00000484453 WASHC2CQ9Y4E1 1318 aa33.91■■■■□ 3.02
RTKN-209ENST00000484453 ABCC3O15438 1527 aa33.9■■■■□ 3.02
RTKN-209ENST00000484453 MYO3AQ8NEV4 1616 aa33.87■■■■□ 3.01
RTKN-209ENST00000484453 UHRF1BP1Q6BDS2 1440 aa33.87■■■■□ 3.01
RTKN-209ENST00000484453 NPATQ14207 1427 aa33.86■■■■□ 3.01
RTKN-209ENST00000484453 ROCK1Q13464 1354 aa33.85■■■■□ 3.01
RTKN-209ENST00000484453 ANKRD50Q9ULJ7 1429 aa33.83■■■■□ 3.01
RTKN-209ENST00000484453 PZPP20742 1482 aa33.82■■■■□ 3
RTKN-209ENST00000484453 ZNF142P52746 1687 aaPredicted RBP33.8■■■■□ 3
RTKN-209ENST00000484453 GRWD1Q9BQ67 446 aaKnown RBP eCLIP33.8■■■■□ 39e-7■■□□□ 13
RTKN-209ENST00000484453 GCC2Q8IWJ2 1684 aa33.78■■■■□ 3
RTKN-209ENST00000484453 KANK1Q14678 1352 aa33.77■■■■□ 3
RTKN-209ENST00000484453 UNC13BO14795 1591 aa33.77■■■■□ 3
RTKN-209ENST00000484453 VWDEQ8N2E2 1590 aa33.75■■■□□ 2.99
RTKN-209ENST00000484453 STRCQ7RTU9 1775 aa33.73■■■□□ 2.99
RTKN-209ENST00000484453 CEP170BQ9Y4F5 1589 aaPredicted RBP33.72■■■□□ 2.99
RTKN-209ENST00000484453 FBXO31Q5XUX0 539 aaPredicted RBP33.7■■■□□ 2.99
RTKN-209ENST00000484453 SPATA31D1Q6ZQQ2 1576 aa33.68■■■□□ 2.98
RTKN-209ENST00000484453 TNRQ92752 1358 aa33.67■■■□□ 2.98
RTKN-209ENST00000484453 LMTK2Q8IWU2 1503 aa33.67■■■□□ 2.98
RTKN-209ENST00000484453 TET3O43151 1660 aa33.66■■■□□ 2.98
RTKN-209ENST00000484453 FBXO41Q8TF61 875 aa33.66■■■□□ 2.98
RTKN-209ENST00000484453 ERVK-7P63135 1459 aa33.64■■■□□ 2.98
RTKN-209ENST00000484453 EFCAB6Q5THR3 1501 aa33.63■■■□□ 2.97
RTKN-209ENST00000484453 IQGAP3Q86VI3 1631 aa33.63■■■□□ 2.97
RTKN-209ENST00000484453 ARHGAP31Q2M1Z3 1444 aa33.61■■■□□ 2.97
RTKN-209ENST00000484453 A2ML1A8K2U0 1454 aa33.6■■■□□ 2.97
RTKN-209ENST00000484453 NAIPQ13075 1403 aa33.57■■■□□ 2.96
RTKN-209ENST00000484453 CERKQ8TCT0 537 aa33.56■■■□□ 2.96
RTKN-209ENST00000484453 DMRT2Q9Y5R5 561 aa33.56■■■□□ 2.96
RTKN-209ENST00000484453 E9PCH4 1651 aa33.55■■■□□ 2.96
RTKN-209ENST00000484453 NLRP1Q9C000 1473 aa33.55■■■□□ 2.96
RTKN-209ENST00000484453 POLR1AO95602 1720 aaPredicted RBP33.53■■■□□ 2.96
RTKN-209ENST00000484453 HFM1A2PYH4 1435 aa33.52■■■□□ 2.96
RTKN-209ENST00000484453 NCKAP5LQ9HCH0 1330 aa33.52■■■□□ 2.96
RTKN-209ENST00000484453 UBR1Q8IWV7 1749 aa33.5■■■□□ 2.95
RTKN-209ENST00000484453 UGGT1Q9NYU2 1555 aa33.5■■■□□ 2.95
RTKN-209ENST00000484453 PTPRTO14522 1441 aa33.49■■■□□ 2.95
RTKN-209ENST00000484453 NUP155O75694 1391 aa33.47■■■□□ 2.95
RTKN-209ENST00000484453 SYNMO15061 1565 aa33.47■■■□□ 2.95
RTKN-209ENST00000484453 PIK3C2BO00750 1634 aa33.47■■■□□ 2.95
RTKN-209ENST00000484453 RPRD2Q5VT52 1461 aaKnown RBP33.46■■■□□ 2.95
RTKN-209ENST00000484453 PLA2R1Q13018 1463 aa33.44■■■□□ 2.94
RTKN-209ENST00000484453 MYO5BQ9ULV0 1848 aa33.42■■■□□ 2.94
RTKN-209ENST00000484453 SPHKAPQ2M3C7 1700 aa33.39■■■□□ 2.94
RTKN-209ENST00000484453 NOS1P29475 1434 aa33.39■■■□□ 2.94
RTKN-209ENST00000484453 KDM5AP29375 1690 aaKnown RBP33.39■■■□□ 2.94
RTKN-209ENST00000484453 THEMISQ8N1K5 641 aaPredicted RBP33.33■■■□□ 2.93
RTKN-209ENST00000484453 LTBP4Q8N2S1 1624 aa33.32■■■□□ 2.92
RTKN-209ENST00000484453 PKD2Q13563 968 aa33.31■■■□□ 2.92
RTKN-209ENST00000484453 TRIM52Q96A61 297 aa33.31■■■□□ 2.92
RTKN-209ENST00000484453 NEURL4Q96JN8 1562 aa33.3■■■□□ 2.92
RTKN-209ENST00000484453 ADGRB3O60242 1522 aa33.29■■■□□ 2.92
RTKN-209ENST00000484453 ZNF335Q9H4Z2 1342 aaPredicted RBP33.28■■■□□ 2.92
RTKN-209ENST00000484453 STAG3Q9UJ98 1225 aa33.26■■■□□ 2.91
RTKN-209ENST00000484453 IDI1Q13907 227 aa33.25■■■□□ 2.91
RTKN-209ENST00000484453 IQGAP1P46940 1657 aa33.25■■■□□ 2.91
RTKN-209ENST00000484453 SETD5Q9C0A6 1442 aa33.22■■■□□ 2.91
RTKN-209ENST00000484453 SLC52A1Q9NWF4 448 aa33.22■■■□□ 2.91
RTKN-209ENST00000484453 SLIT1O75093 1534 aa33.22■■■□□ 2.91
RTKN-209ENST00000484453 TMEM131LA2VDJ0 1609 aa33.21■■■□□ 2.91
RTKN-209ENST00000484453 ANKLE2Q86XL3 938 aa33.21■■■□□ 2.91
RTKN-209ENST00000484453 KIF1BO60333 1816 aa33.18■■■□□ 2.9
RTKN-209ENST00000484453 ARHGAP23Q9P227 1491 aa33.18■■■□□ 2.9
RTKN-209ENST00000484453 SCAF11Q99590 1463 aaKnown RBP33.15■■■□□ 2.9
RTKN-209ENST00000484453 SLC4A1APQ9BWU0 796 aaKnown RBP33.15■■■□□ 2.9
RTKN-209ENST00000484453 CLTCL1P53675 1640 aa33.14■■■□□ 2.9
RTKN-209ENST00000484453 TRPM2O94759 1503 aa33.13■■■□□ 2.89
RTKN-209ENST00000484453 MED14O60244 1454 aa33.13■■■□□ 2.89
RTKN-209ENST00000484453 NPHP4O75161 1426 aaPredicted RBP33.13■■■□□ 2.89
RTKN-209ENST00000484453 RAB3GAP2Q9H2M9 1393 aa33.12■■■□□ 2.89
RTKN-209ENST00000484453 TMEM2Q9UHN6 1383 aa33.11■■■□□ 2.89
RTKN-209ENST00000484453 CHGAP10645 457 aaKnown RBP33.1■■■□□ 2.89
RTKN-209ENST00000484453 TXNDC2Q86VQ3 553 aa33.07■■■□□ 2.88
RTKN-209ENST00000484453 EID1Q9Y6B2 187 aa33.07■■■□□ 2.88
RTKN-209ENST00000484453 LTKP29376 864 aa33.05■■■□□ 2.88
RTKN-209ENST00000484453 ACIN1Q9UKV3 1341 aaKnown RBP33.04■■■□□ 2.88
RTKN-209ENST00000484453 IQSEC2Q5JU85 1478 aa33.01■■■□□ 2.88
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms