RNA–Protein interactions for RNA: ENST00000484084.5

RTFDC1-208, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 657 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-208ENST00000484084 HSPA1LP34931 641 aa14.16□□□□□ -0.14
RTFDC1-208ENST00000484084 DHX29Q7Z478 1369 aaKnown RBP14.16□□□□□ -0.14
RTFDC1-208ENST00000484084 MED1Q15648 1581 aaPredicted RBP14.16□□□□□ -0.14
RTFDC1-208ENST00000484084 SHANK2Q9UPX8 1470 aa14.15□□□□□ -0.14
RTFDC1-208ENST00000484084 PZPP20742 1482 aa14.14□□□□□ -0.15
RTFDC1-208ENST00000484084 CPS1P31327 1500 aa14.14□□□□□ -0.15
RTFDC1-208ENST00000484084 STRCP1A6NGW2 1772 aa14.12□□□□□ -0.15
RTFDC1-208ENST00000484084 MED14O60244 1454 aa14.12□□□□□ -0.15
RTFDC1-208ENST00000484084 MTUS2Q5JR59 1369 aa14.11□□□□□ -0.15
RTFDC1-208ENST00000484084 TNRQ92752 1358 aa14.11□□□□□ -0.15
RTFDC1-208ENST00000484084 KDM5DQ9BY66 1539 aa14.11□□□□□ -0.15
RTFDC1-208ENST00000484084 CEP162Q5TB80 1403 aa14.11□□□□□ -0.15
RTFDC1-208ENST00000484084 EHBP1L1Q8N3D4 1523 aa14.1□□□□□ -0.15
RTFDC1-208ENST00000484084 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.1□□□□□ -0.15
RTFDC1-208ENST00000484084 DEPDC5O75140 1603 aa14.1□□□□□ -0.15
RTFDC1-208ENST00000484084 FAM135AQ9P2D6 1515 aa14.1□□□□□ -0.15
RTFDC1-208ENST00000484084 PIP4K2BP78356 416 aa14.09□□□□□ -0.15
RTFDC1-208ENST00000484084 MIA2Q96PC5 1412 aa14.08□□□□□ -0.15
RTFDC1-208ENST00000484084 KIF3BO15066 747 aa14.08□□□□□ -0.16
RTFDC1-208ENST00000484084 CAMSAP2Q08AD1 1489 aa14.07□□□□□ -0.16
RTFDC1-208ENST00000484084 CCDC141Q6ZP82 1450 aa14.07□□□□□ -0.16
RTFDC1-208ENST00000484084 NLRP1Q9C000 1473 aa14.06□□□□□ -0.16
RTFDC1-208ENST00000484084 UGGT1Q9NYU2 1555 aa14.06□□□□□ -0.16
RTFDC1-208ENST00000484084 TOM1O60784 492 aa14.06□□□□□ -0.16
RTFDC1-208ENST00000484084 NPHP4O75161 1426 aaPredicted RBP14.06□□□□□ -0.16
RTFDC1-208ENST00000484084 NCOA2Q15596 1464 aa14.06□□□□□ -0.16
RTFDC1-208ENST00000484084 IQGAP1P46940 1657 aa14.05□□□□□ -0.16
RTFDC1-208ENST00000484084 LRRC7Q96NW7 1537 aa14.05□□□□□ -0.16
RTFDC1-208ENST00000484084 ARHGEF5Q12774 1597 aa14.05□□□□□ -0.16
RTFDC1-208ENST00000484084 MROH1Q8NDA8 1641 aa14.04□□□□□ -0.16
RTFDC1-208ENST00000484084 RNF17Q9BXT8 1623 aaKnown RBP14.04□□□□□ -0.16
RTFDC1-208ENST00000484084 ZC3H13Q5T200 1668 aaKnown RBP14.04□□□□□ -0.16
RTFDC1-208ENST00000484084 ANKLE2Q86XL3 938 aa14.04□□□□□ -0.16
RTFDC1-208ENST00000484084 WASHC2CQ9Y4E1 1318 aa14.04□□□□□ -0.16
RTFDC1-208ENST00000484084 ABCC3O15438 1527 aa14.03□□□□□ -0.16
RTFDC1-208ENST00000484084 SCAF1Q9H7N4 1312 aaKnown RBP14.02□□□□□ -0.17
RTFDC1-208ENST00000484084 THEMISQ8N1K5 641 aaPredicted RBP14.02□□□□□ -0.17
RTFDC1-208ENST00000484084 XIRP1Q702N8 1843 aaKnown RBP14□□□□□ -0.17
RTFDC1-208ENST00000484084 RSPH4AQ5TD94 716 aa14□□□□□ -0.17
RTFDC1-208ENST00000484084 RGS17Q9UGC6 210 aaPredicted RBP14□□□□□ -0.17
RTFDC1-208ENST00000484084 UBR1Q8IWV7 1749 aa14□□□□□ -0.17
RTFDC1-208ENST00000484084 MAST1Q9Y2H9 1570 aa14□□□□□ -0.17
RTFDC1-208ENST00000484084 ERVK-7P63135 1459 aa13.99□□□□□ -0.17
RTFDC1-208ENST00000484084 SYNMO15061 1565 aa13.98□□□□□ -0.17
RTFDC1-208ENST00000484084 EIF2AK4Q9P2K8 1649 aaKnown RBP13.97□□□□□ -0.17
RTFDC1-208ENST00000484084 ARHGAP23Q9P227 1491 aa13.96□□□□□ -0.17
RTFDC1-208ENST00000484084 LTKP29376 864 aa13.95□□□□□ -0.18
RTFDC1-208ENST00000484084 CEP152O94986 1710 aa13.95□□□□□ -0.18
RTFDC1-208ENST00000484084 SLIT1O75093 1534 aa13.95□□□□□ -0.18
RTFDC1-208ENST00000484084 LRRC9Q6ZRR7 1453 aa13.93□□□□□ -0.18
RTFDC1-208ENST00000484084 SCAF11Q99590 1463 aaKnown RBP13.92□□□□□ -0.18
RTFDC1-208ENST00000484084 TSPY4P0CV99 314 aa13.91□□□□□ -0.18
RTFDC1-208ENST00000484084 TSPY10P0CW01 314 aa13.91□□□□□ -0.18
RTFDC1-208ENST00000484084 SENP3Q9H4L4 574 aaPredicted RBP13.91□□□□□ -0.18
RTFDC1-208ENST00000484084 CFAP65Q6ZU64 1925 aaKnown RBP13.9□□□□□ -0.18
RTFDC1-208ENST00000484084 KANK4Q5T7N3 995 aaPredicted RBP13.9□□□□□ -0.18
RTFDC1-208ENST00000484084 PRDM15P57071 1507 aaPredicted RBP13.9□□□□□ -0.19
RTFDC1-208ENST00000484084 ARHGAP31Q2M1Z3 1444 aa13.9□□□□□ -0.19
RTFDC1-208ENST00000484084 PHF23Q9BUL5 403 aaPredicted RBP13.89□□□□□ -0.19
RTFDC1-208ENST00000484084 PIK3C2BO00750 1634 aa13.88□□□□□ -0.19
RTFDC1-208ENST00000484084 MAP3K1Q13233 1512 aa13.87□□□□□ -0.19
RTFDC1-208ENST00000484084 DUOX2Q9NRD8 1548 aa13.87□□□□□ -0.19
RTFDC1-208ENST00000484084 TET3O43151 1660 aa13.87□□□□□ -0.19
RTFDC1-208ENST00000484084 TXNDC2Q86VQ3 553 aa13.86□□□□□ -0.19
RTFDC1-208ENST00000484084 FAM135BQ49AJ0 1406 aa13.86□□□□□ -0.19
RTFDC1-208ENST00000484084 TMEM2Q9UHN6 1383 aa13.84□□□□□ -0.19
RTFDC1-208ENST00000484084 ABCC5O15440 1437 aa13.84□□□□□ -0.19
RTFDC1-208ENST00000484084 MYOM3Q5VTT5 1437 aa13.84□□□□□ -0.19
RTFDC1-208ENST00000484084 VPS8Q8N3P4 1428 aa13.84□□□□□ -0.19
RTFDC1-208ENST00000484084 POTEAQ6S8J7 498 aa13.84□□□□□ -0.19
RTFDC1-208ENST00000484084 CROCC2H7BZ55 1655 aa13.84□□□□□ -0.19
RTFDC1-208ENST00000484084 KDM5AP29375 1690 aaKnown RBP13.84□□□□□ -0.19
RTFDC1-208ENST00000484084 TMEM94Q12767 1356 aa13.82□□□□□ -0.2
RTFDC1-208ENST00000484084 ROBO1Q9Y6N7 1651 aa13.82□□□□□ -0.2
RTFDC1-208ENST00000484084 ERBINQ96RT1 1412 aa13.81□□□□□ -0.2
RTFDC1-208ENST00000484084 KIF15Q9NS87 1388 aa13.81□□□□□ -0.2
RTFDC1-208ENST00000484084 LMTK2Q8IWU2 1503 aa13.8□□□□□ -0.2
RTFDC1-208ENST00000484084 IDI1Q13907 227 aa13.8□□□□□ -0.2
RTFDC1-208ENST00000484084 RBM33Q96EV2 1170 aaKnown RBP13.8□□□□□ -0.2
RTFDC1-208ENST00000484084 EFCAB6Q5THR3 1501 aa13.8□□□□□ -0.2
RTFDC1-208ENST00000484084 NWD1Q149M9 1564 aa13.79□□□□□ -0.2
RTFDC1-208ENST00000484084 KCNA6P17658 529 aa13.78□□□□□ -0.2
RTFDC1-208ENST00000484084 RRP7BPQ9NSQ0 103 aa13.78□□□□□ -0.2
RTFDC1-208ENST00000484084 NOS1P29475 1434 aa13.78□□□□□ -0.2
RTFDC1-208ENST00000484084 SLC26A8Q96RN1 970 aa13.77□□□□□ -0.21
RTFDC1-208ENST00000484084 PTPN23Q9H3S7 1636 aa13.76□□□□□ -0.21
RTFDC1-208ENST00000484084 DAPK1P53355 1430 aa13.76□□□□□ -0.21
RTFDC1-208ENST00000484084 EID1Q9Y6B2 187 aa13.76□□□□□ -0.21
RTFDC1-208ENST00000484084 SETD1AO15047 1707 aaKnown RBP13.76□□□□□ -0.21
RTFDC1-208ENST00000484084 LOC105371045A0A1W2PR82 267 aa13.75□□□□□ -0.21
RTFDC1-208ENST00000484084 ADGRB3O60242 1522 aa13.74□□□□□ -0.21
RTFDC1-208ENST00000484084 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.74□□□□□ -0.218e-11■■■□□ 14.6
RTFDC1-208ENST00000484084 NKTRP30414 1462 aaKnown RBP13.74□□□□□ -0.21
RTFDC1-208ENST00000484084 ZFYVE9O95405 1425 aa13.73□□□□□ -0.21
RTFDC1-208ENST00000484084 COL16A1Q07092 1604 aaPredicted RBP13.72□□□□□ -0.21
RTFDC1-208ENST00000484084 CHD2O14647 1828 aaKnown RBP13.72□□□□□ -0.21
RTFDC1-208ENST00000484084 PHLPP1O60346 1717 aa13.71□□□□□ -0.21
RTFDC1-208ENST00000484084 PROSER2Q86WR7 435 aaPredicted RBP13.71□□□□□ -0.21
RTFDC1-208ENST00000484084 LRP6O75581 1613 aa13.71□□□□□ -0.22
RTFDC1-208ENST00000484084 MYO5BQ9ULV0 1848 aa13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms