RNA–Protein interactions for RNA: ENST00000483955.1

SHROOM4-204, Transcript of shroom family member 4, humanhuman

TSL 2

Gene SHROOM4, Length 882 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-204ENST00000483955 NAIPQ13075 1403 aa13.51□□□□□ -0.25
SHROOM4-204ENST00000483955 ARHGEF40Q8TER5 1519 aa13.5□□□□□ -0.25
SHROOM4-204ENST00000483955 SETD5Q9C0A6 1442 aa13.5□□□□□ -0.25
SHROOM4-204ENST00000483955 ABCA6Q8N139 1617 aa13.5□□□□□ -0.25
SHROOM4-204ENST00000483955 DIP2CQ9Y2E4 1556 aa13.49□□□□□ -0.25
SHROOM4-204ENST00000483955 ERBINQ96RT1 1412 aa13.49□□□□□ -0.25
SHROOM4-204ENST00000483955 ACIN1Q9UKV3 1341 aaKnown RBP13.49□□□□□ -0.25
SHROOM4-204ENST00000483955 RRP7BPQ9NSQ0 103 aa13.49□□□□□ -0.25
SHROOM4-204ENST00000483955 REREQ9P2R6 1566 aa13.48□□□□□ -0.25
SHROOM4-204ENST00000483955 ANKRD50Q9ULJ7 1429 aa13.47□□□□□ -0.25
SHROOM4-204ENST00000483955 EIF2AK4Q9P2K8 1649 aaKnown RBP13.47□□□□□ -0.25
SHROOM4-204ENST00000483955 A2MP01023 1474 aa13.47□□□□□ -0.25
SHROOM4-204ENST00000483955 YEATS2Q9ULM3 1422 aa13.46□□□□□ -0.26
SHROOM4-204ENST00000483955 DHX29Q7Z478 1369 aaKnown RBP13.45□□□□□ -0.26
SHROOM4-204ENST00000483955 RAB3GAP2Q9H2M9 1393 aa13.45□□□□□ -0.26
SHROOM4-204ENST00000483955 ATP10AO60312 1499 aa13.45□□□□□ -0.26
SHROOM4-204ENST00000483955 HRCP23327 699 aa13.45□□□□□ -0.26
SHROOM4-204ENST00000483955 BCORL1Q5H9F3 1711 aa13.43□□□□□ -0.26
SHROOM4-204ENST00000483955 AGLP35573 1532 aa13.41□□□□□ -0.26
SHROOM4-204ENST00000483955 UNC13BO14795 1591 aa13.41□□□□□ -0.26
SHROOM4-204ENST00000483955 DEPDC5O75140 1603 aa13.39□□□□□ -0.27
SHROOM4-204ENST00000483955 RNF17Q9BXT8 1623 aaKnown RBP13.39□□□□□ -0.27
SHROOM4-204ENST00000483955 PRDM15P57071 1507 aaPredicted RBP13.38□□□□□ -0.27
SHROOM4-204ENST00000483955 KDM5DQ9BY66 1539 aa13.38□□□□□ -0.27
SHROOM4-204ENST00000483955 FAM135AQ9P2D6 1515 aa13.36□□□□□ -0.27
SHROOM4-204ENST00000483955 KIF3BO15066 747 aa13.36□□□□□ -0.27
SHROOM4-204ENST00000483955 KANK1Q14678 1352 aa13.35□□□□□ -0.27
SHROOM4-204ENST00000483955 IQGAP3Q86VI3 1631 aa13.35□□□□□ -0.27
SHROOM4-204ENST00000483955 TRIM52Q96A61 297 aa13.34□□□□□ -0.27
SHROOM4-204ENST00000483955 MROH1Q8NDA8 1641 aa13.34□□□□□ -0.27
SHROOM4-204ENST00000483955 ZC3H13Q5T200 1668 aaKnown RBP13.34□□□□□ -0.27
SHROOM4-204ENST00000483955 NUP155O75694 1391 aa13.32□□□□□ -0.28
SHROOM4-204ENST00000483955 VWDEQ8N2E2 1590 aa13.32□□□□□ -0.28
SHROOM4-204ENST00000483955 SIGLEC1Q9BZZ2 1709 aa13.32□□□□□ -0.28
SHROOM4-204ENST00000483955 PZPP20742 1482 aa13.3□□□□□ -0.28
SHROOM4-204ENST00000483955 LMTK2Q8IWU2 1503 aa13.3□□□□□ -0.28
SHROOM4-204ENST00000483955 POTEHQ6S545 545 aa13.3□□□□□ -0.28
SHROOM4-204ENST00000483955 ARID4BQ4LE39 1312 aaPredicted RBP13.3□□□□□ -0.28
SHROOM4-204ENST00000483955 DHX57Q6P158 1386 aaKnown RBP13.3□□□□□ -0.28
SHROOM4-204ENST00000483955 TET3O43151 1660 aa13.29□□□□□ -0.28
SHROOM4-204ENST00000483955 GGT6Q6P531 493 aa13.29□□□□□ -0.28
SHROOM4-204ENST00000483955 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.29□□□□□ -0.28
SHROOM4-204ENST00000483955 SLC4A1APQ9BWU0 796 aaKnown RBP13.28□□□□□ -0.28
SHROOM4-204ENST00000483955 ABCC3O15438 1527 aa13.28□□□□□ -0.28
SHROOM4-204ENST00000483955 MPHOSPH9Q99550 1183 aa13.27□□□□□ -0.29
SHROOM4-204ENST00000483955 EFCAB6Q5THR3 1501 aa13.27□□□□□ -0.29
SHROOM4-204ENST00000483955 CEP152O94986 1710 aa13.27□□□□□ -0.29
SHROOM4-204ENST00000483955 CLSPNQ9HAW4 1339 aa13.26□□□□□ -0.29
SHROOM4-204ENST00000483955 CNTLNQ9NXG0 1405 aa13.26□□□□□ -0.29
SHROOM4-204ENST00000483955 WASHC2CQ9Y4E1 1318 aa13.26□□□□□ -0.29
SHROOM4-204ENST00000483955 CAMSAP1Q5T5Y3 1602 aa13.25□□□□□ -0.29
SHROOM4-204ENST00000483955 RPRD2Q5VT52 1461 aaKnown RBP13.25□□□□□ -0.29
SHROOM4-204ENST00000483955 ESF1Q9H501 851 aaKnown RBP13.24□□□□□ -0.29
SHROOM4-204ENST00000483955 ARHGAP31Q2M1Z3 1444 aa13.23□□□□□ -0.29
SHROOM4-204ENST00000483955 KCNA4P22459 653 aa13.23□□□□□ -0.29
SHROOM4-204ENST00000483955 CCER1Q8TC90 406 aaPredicted RBP13.23□□□□□ -0.29
SHROOM4-204ENST00000483955 MROH2AA6NES4 1674 aa13.23□□□□□ -0.29
SHROOM4-204ENST00000483955 CLTCQ00610 1675 aaKnown RBP13.22□□□□□ -0.29
SHROOM4-204ENST00000483955 MLECQ14165 292 aa13.22□□□□□ -0.29
SHROOM4-204ENST00000483955 FER1L4A9Z1Z3 1794 aa13.22□□□□□ -0.29
SHROOM4-204ENST00000483955 E9PCH4 1651 aa13.21□□□□□ -0.29
SHROOM4-204ENST00000483955 PKD2Q13563 968 aa13.21□□□□□ -0.29
SHROOM4-204ENST00000483955 ADAMTSL3P82987 1691 aa13.2□□□□□ -0.3
SHROOM4-204ENST00000483955 NPATQ14207 1427 aa13.2□□□□□ -0.3
SHROOM4-204ENST00000483955 SPHKAPQ2M3C7 1700 aa13.19□□□□□ -0.3
SHROOM4-204ENST00000483955 MADDQ8WXG6 1647 aa13.18□□□□□ -0.3
SHROOM4-204ENST00000483955 TRPM2O94759 1503 aa13.18□□□□□ -0.3
SHROOM4-204ENST00000483955 ANKRD30BQ9BXX2 1392 aa13.17□□□□□ -0.3
SHROOM4-204ENST00000483955 PTPRTO14522 1441 aa13.16□□□□□ -0.3
SHROOM4-204ENST00000483955 AMER1Q5JTC6 1135 aaPredicted RBP13.16□□□□□ -0.3
SHROOM4-204ENST00000483955 RIMS1Q86UR5 1692 aaKnown RBP13.15□□□□□ -0.3
SHROOM4-204ENST00000483955 PREX1Q8TCU6 1659 aa13.15□□□□□ -0.3
SHROOM4-204ENST00000483955 ZMYM3Q14202 1370 aa13.15□□□□□ -0.3
SHROOM4-204ENST00000483955 ERVK-7P63135 1459 aa13.15□□□□□ -0.3
SHROOM4-204ENST00000483955 SPATA31D1Q6ZQQ2 1576 aa13.15□□□□□ -0.3
SHROOM4-204ENST00000483955 CCDC144AA2RUR9 1427 aa13.14□□□□□ -0.31
SHROOM4-204ENST00000483955 NOS1P29475 1434 aa13.14□□□□□ -0.31
SHROOM4-204ENST00000483955 C3P01024 1663 aa13.13□□□□□ -0.31
SHROOM4-204ENST00000483955 PLA2R1Q13018 1463 aa13.11□□□□□ -0.31
SHROOM4-204ENST00000483955 RTN4Q9NQC3 1192 aaKnown RBP13.11□□□□□ -0.31
SHROOM4-204ENST00000483955 SYNMO15061 1565 aa13.11□□□□□ -0.31
SHROOM4-204ENST00000483955 CLTCL1P53675 1640 aa13.1□□□□□ -0.31
SHROOM4-204ENST00000483955 NEURL4Q96JN8 1562 aa13.1□□□□□ -0.31
SHROOM4-204ENST00000483955 PIK3C2BO00750 1634 aa13.1□□□□□ -0.31
SHROOM4-204ENST00000483955 SLC52A1Q9NWF4 448 aa13.09□□□□□ -0.31
SHROOM4-204ENST00000483955 TNRQ92752 1358 aa13.08□□□□□ -0.31
SHROOM4-204ENST00000483955 PTPRMP28827 1452 aa13.08□□□□□ -0.32
SHROOM4-204ENST00000483955 ZEB1P37275 1124 aaPredicted RBP13.07□□□□□ -0.32
SHROOM4-204ENST00000483955 TIMELESSQ9UNS1 1208 aa13.07□□□□□ -0.32
SHROOM4-204ENST00000483955 TONSLQ96HA7 1378 aa13.07□□□□□ -0.32
SHROOM4-204ENST00000483955 KIF1BO60333 1816 aa13.06□□□□□ -0.32
SHROOM4-204ENST00000483955 NLRP1Q9C000 1473 aa13.06□□□□□ -0.32
SHROOM4-204ENST00000483955 FBXO31Q5XUX0 539 aaPredicted RBP13.06□□□□□ -0.32
SHROOM4-204ENST00000483955 SIN3AQ96ST3 1273 aa13.06□□□□□ -0.32
SHROOM4-204ENST00000483955 UGGT1Q9NYU2 1555 aa13.06□□□□□ -0.32
SHROOM4-204ENST00000483955 CFAP65Q6ZU64 1925 aaKnown RBP13.05□□□□□ -0.32
SHROOM4-204ENST00000483955 ADGRB3O60242 1522 aa13.05□□□□□ -0.32
SHROOM4-204ENST00000483955 NEUROD1Q13562 356 aa13.05□□□□□ -0.32
SHROOM4-204ENST00000483955 MYO3AQ8NEV4 1616 aa13.04□□□□□ -0.32
SHROOM4-204ENST00000483955 KDM5AP29375 1690 aaKnown RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms