RNA–Protein interactions for RNA: ENST00000483764.5

MRPL28-210, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,512 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-210ENST00000483764 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.07■■□□□ 1.68e-6■□□□□ 8.2
MRPL28-210ENST00000483764 PZPP20742 1482 aa25.06■■□□□ 1.6
MRPL28-210ENST00000483764 UNC13BO14795 1591 aa25.05■■□□□ 1.6
MRPL28-210ENST00000483764 ATP10AO60312 1499 aa25.05■■□□□ 1.6
MRPL28-210ENST00000483764 EIF2AK4Q9P2K8 1649 aaKnown RBP25.05■■□□□ 1.6
MRPL28-210ENST00000483764 KDM5DQ9BY66 1539 aa25.05■■□□□ 1.6
MRPL28-210ENST00000483764 FAM135AQ9P2D6 1515 aa24.98■■□□□ 1.59
MRPL28-210ENST00000483764 PKD2Q13563 968 aa24.98■■□□□ 1.59
MRPL28-210ENST00000483764 DEPDC5O75140 1603 aa24.97■■□□□ 1.59
MRPL28-210ENST00000483764 KANK1Q14678 1352 aa24.97■■□□□ 1.59
MRPL28-210ENST00000483764 ARHGEF40Q8TER5 1519 aa24.97■■□□□ 1.59
MRPL28-210ENST00000483764 FOXD1Q16676 465 aa24.96■■□□□ 1.59
MRPL28-210ENST00000483764 REREQ9P2R6 1566 aa24.96■■□□□ 1.59
MRPL28-210ENST00000483764 GGT6Q6P531 493 aa24.95■■□□□ 1.58
MRPL28-210ENST00000483764 IQGAP3Q86VI3 1631 aa24.95■■□□□ 1.58
MRPL28-210ENST00000483764 BCORL1Q5H9F3 1711 aa24.94■■□□□ 1.58
MRPL28-210ENST00000483764 RNF17Q9BXT8 1623 aaKnown RBP24.93■■□□□ 1.58
MRPL28-210ENST00000483764 PRDM15P57071 1507 aaPredicted RBP24.93■■□□□ 1.58
MRPL28-210ENST00000483764 MROH1Q8NDA8 1641 aa24.92■■□□□ 1.58
MRPL28-210ENST00000483764 VWDEQ8N2E2 1590 aa24.91■■□□□ 1.58
MRPL28-210ENST00000483764 SIN3AQ96ST3 1273 aa24.91■■□□□ 1.58
MRPL28-210ENST00000483764 AGLP35573 1532 aa24.91■■□□□ 1.58
MRPL28-210ENST00000483764 ANKRD30BQ9BXX2 1392 aa24.89■■□□□ 1.58
MRPL28-210ENST00000483764 NEUROD1Q13562 356 aa24.87■■□□□ 1.57
MRPL28-210ENST00000483764 WASHC2CQ9Y4E1 1318 aa24.85■■□□□ 1.57
MRPL28-210ENST00000483764 LMTK2Q8IWU2 1503 aa24.83■■□□□ 1.57
MRPL28-210ENST00000483764 PPP6R1Q9UPN7 881 aa24.81■■□□□ 1.56
MRPL28-210ENST00000483764 TET3O43151 1660 aa24.81■■□□□ 1.56
MRPL28-210ENST00000483764 SIGLEC1Q9BZZ2 1709 aa24.81■■□□□ 1.56
MRPL28-210ENST00000483764 ARID4BQ4LE39 1312 aaPredicted RBP24.8■■□□□ 1.56
MRPL28-210ENST00000483764 ABCC3O15438 1527 aa24.79■■□□□ 1.56
MRPL28-210ENST00000483764 TIMELESSQ9UNS1 1208 aa24.78■■□□□ 1.56
MRPL28-210ENST00000483764 MLECQ14165 292 aa24.77■■□□□ 1.56
MRPL28-210ENST00000483764 EFCAB6Q5THR3 1501 aa24.75■■□□□ 1.55
MRPL28-210ENST00000483764 E9PCH4 1651 aa24.75■■□□□ 1.55
MRPL28-210ENST00000483764 CEP152O94986 1710 aa24.75■■□□□ 1.55
MRPL28-210ENST00000483764 PLA2R1Q13018 1463 aa24.74■■□□□ 1.55
MRPL28-210ENST00000483764 RPRD2Q5VT52 1461 aaKnown RBP24.73■■□□□ 1.55
MRPL28-210ENST00000483764 ZC3H13Q5T200 1668 aaKnown RBP24.72■■□□□ 1.55
MRPL28-210ENST00000483764 TONSLQ96HA7 1378 aa24.72■■□□□ 1.55
MRPL28-210ENST00000483764 PTPRTO14522 1441 aa24.71■■□□□ 1.55
MRPL28-210ENST00000483764 NPATQ14207 1427 aa24.69■■□□□ 1.54
MRPL28-210ENST00000483764 ARHGAP31Q2M1Z3 1444 aa24.69■■□□□ 1.54
MRPL28-210ENST00000483764 ZNF316A6NFI3 1004 aaPredicted RBP24.69■■□□□ 1.54
MRPL28-210ENST00000483764 CCDC144AA2RUR9 1427 aa24.69■■□□□ 1.54
MRPL28-210ENST00000483764 ESF1Q9H501 851 aaKnown RBP24.68■■□□□ 1.54
MRPL28-210ENST00000483764 CAMSAP1Q5T5Y3 1602 aa24.68■■□□□ 1.54
MRPL28-210ENST00000483764 TRPM2O94759 1503 aa24.64■■□□□ 1.53
MRPL28-210ENST00000483764 SPHKAPQ2M3C7 1700 aa24.62■■□□□ 1.53
MRPL28-210ENST00000483764 DIEXFQ68CQ4 756 aaKnown RBP24.61■■□□□ 1.53
MRPL28-210ENST00000483764 L3MBTL2Q969R5 705 aa24.61■■□□□ 1.53
MRPL28-210ENST00000483764 CLTCQ00610 1675 aaKnown RBP24.61■■□□□ 1.53
MRPL28-210ENST00000483764 PPP1R15AO75807 674 aaPredicted RBP24.6■■□□□ 1.53
MRPL28-210ENST00000483764 CNTLNQ9NXG0 1405 aa24.6■■□□□ 1.53
MRPL28-210ENST00000483764 NOS1P29475 1434 aa24.59■■□□□ 1.53
MRPL28-210ENST00000483764 ZMYM3Q14202 1370 aa24.58■■□□□ 1.52
MRPL28-210ENST00000483764 FBXO31Q5XUX0 539 aaPredicted RBP24.56■■□□□ 1.52
MRPL28-210ENST00000483764 CLTCL1P53675 1640 aa24.54■■□□□ 1.52
MRPL28-210ENST00000483764 RGL3Q3MIN7 710 aa24.52■■□□□ 1.52
MRPL28-210ENST00000483764 CFAP65Q6ZU64 1925 aaKnown RBP24.51■■□□□ 1.51
MRPL28-210ENST00000483764 UGGT1Q9NYU2 1555 aa24.51■■□□□ 1.51
MRPL28-210ENST00000483764 ERVK-7P63135 1459 aa24.51■■□□□ 1.51
MRPL28-210ENST00000483764 SPATA31E1Q6ZUB1 1445 aa24.51■■□□□ 1.51
MRPL28-210ENST00000483764 SLC52A1Q9NWF4 448 aa24.51■■□□□ 1.51
MRPL28-210ENST00000483764 AEBP2Q6ZN18 517 aaPredicted RBP24.5■■□□□ 1.51
MRPL28-210ENST00000483764 PREX1Q8TCU6 1659 aa24.5■■□□□ 1.51
MRPL28-210ENST00000483764 SYNMO15061 1565 aa24.49■■□□□ 1.51
MRPL28-210ENST00000483764 MROH2AA6NES4 1674 aa24.48■■□□□ 1.51
MRPL28-210ENST00000483764 IDI1Q13907 227 aa24.47■■□□□ 1.51
MRPL28-210ENST00000483764 DCAF11Q8TEB1 546 aa24.47■■□□□ 1.51
MRPL28-210ENST00000483764 SPATA31D1Q6ZQQ2 1576 aa24.46■■□□□ 1.51
MRPL28-210ENST00000483764 FER1L4A9Z1Z3 1794 aa24.45■■□□□ 1.5
MRPL28-210ENST00000483764 CHGAP10645 457 aaKnown RBP24.44■■□□□ 1.5
MRPL28-210ENST00000483764 KDM2AQ9Y2K7 1162 aa24.44■■□□□ 1.5
MRPL28-210ENST00000483764 PIK3C2BO00750 1634 aa24.44■■□□□ 1.5
MRPL28-210ENST00000483764 NEURL4Q96JN8 1562 aa24.43■■□□□ 1.5
MRPL28-210ENST00000483764 CEBPAP49715 358 aaPredicted RBP24.43■■□□□ 1.5
MRPL28-210ENST00000483764 NBPF8Q3BBV2 869 aa24.4■■□□□ 1.5
MRPL28-210ENST00000483764 ADAMTSL3P82987 1691 aa24.4■■□□□ 1.5
MRPL28-210ENST00000483764 KIF1BO60333 1816 aa24.4■■□□□ 1.5
MRPL28-210ENST00000483764 MADDQ8WXG6 1647 aa24.4■■□□□ 1.5
MRPL28-210ENST00000483764 TNRQ92752 1358 aa24.39■■□□□ 1.49
MRPL28-210ENST00000483764 STAC3Q96MF2 364 aa24.39■■□□□ 1.49
MRPL28-210ENST00000483764 ADGRB3O60242 1522 aa24.38■■□□□ 1.49
MRPL28-210ENST00000483764 ZNF326Q5BKZ1 582 aaKnown RBP24.38■■□□□ 1.49
MRPL28-210ENST00000483764 UHRF1BP1Q6BDS2 1440 aa24.37■■□□□ 1.49
MRPL28-210ENST00000483764 C3P01024 1663 aa24.36■■□□□ 1.49
MRPL28-210ENST00000483764 PLPPR3Q6T4P5 718 aa24.35■■□□□ 1.49
MRPL28-210ENST00000483764 RPGRIP1LQ68CZ1 1315 aa24.34■■□□□ 1.49
MRPL28-210ENST00000483764 STAG3Q9UJ98 1225 aa24.34■■□□□ 1.49
MRPL28-210ENST00000483764 RIMS1Q86UR5 1692 aaKnown RBP24.34■■□□□ 1.49
MRPL28-210ENST00000483764 PRAG1Q86YV5 1406 aa24.31■■□□□ 1.48
MRPL28-210ENST00000483764 TMEM131LA2VDJ0 1609 aa24.3■■□□□ 1.48
MRPL28-210ENST00000483764 CENPBP07199 599 aaPredicted RBP24.3■■□□□ 1.48
MRPL28-210ENST00000483764 NLRP1Q9C000 1473 aa24.28■■□□□ 1.48
MRPL28-210ENST00000483764 A2ML1A8K2U0 1454 aa24.26■■□□□ 1.47
MRPL28-210ENST00000483764 MYOM2P54296 1465 aa24.26■■□□□ 1.47
MRPL28-210ENST00000483764 VGFO15240 615 aaPredicted RBP24.25■■□□□ 1.47
MRPL28-210ENST00000483764 ADGRF5Q8IZF2 1346 aa24.24■■□□□ 1.47
MRPL28-210ENST00000483764 RALGAPBQ86X10 1494 aa24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms