RNA–Protein interactions for RNA: ENST00000483708.1

COMMD2-205, Transcript of COMM domain containing 2, humanhuman

TSL 3

Gene COMMD2, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD2-205ENST00000483708 NPATQ14207 1427 aa19.24■□□□□ 0.67
COMMD2-205ENST00000483708 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.23■□□□□ 0.67
COMMD2-205ENST00000483708 DUOX2Q9NRD8 1548 aa19.23■□□□□ 0.67
COMMD2-205ENST00000483708 NCOA1Q15788 1441 aa19.23■□□□□ 0.67
COMMD2-205ENST00000483708 ITGAEP38570 1179 aa19.22■□□□□ 0.67
COMMD2-205ENST00000483708 FBXO31Q5XUX0 539 aaPredicted RBP19.22■□□□□ 0.67
COMMD2-205ENST00000483708 PTPRKQ15262 1439 aa19.21■□□□□ 0.67
COMMD2-205ENST00000483708 DNMT1P26358 1616 aaKnown RBP19.21■□□□□ 0.67
COMMD2-205ENST00000483708 C3P01024 1663 aa19.2■□□□□ 0.66
COMMD2-205ENST00000483708 ERBINQ96RT1 1412 aa19.18■□□□□ 0.66
COMMD2-205ENST00000483708 CLTCQ00610 1675 aaKnown RBP19.18■□□□□ 0.66
COMMD2-205ENST00000483708 KDM5DQ9BY66 1539 aa19.17■□□□□ 0.66
COMMD2-205ENST00000483708 MROH2AA6NES4 1674 aa19.17■□□□□ 0.66
COMMD2-205ENST00000483708 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.16■□□□□ 0.66
COMMD2-205ENST00000483708 DMRT2Q9Y5R5 561 aa19.15■□□□□ 0.66
COMMD2-205ENST00000483708 ADGRL2O95490 1459 aa19.15■□□□□ 0.66
COMMD2-205ENST00000483708 FAM135AQ9P2D6 1515 aa19.15■□□□□ 0.66
COMMD2-205ENST00000483708 KANK1Q14678 1352 aa19.14■□□□□ 0.65
COMMD2-205ENST00000483708 TNRQ92752 1358 aa19.14■□□□□ 0.65
COMMD2-205ENST00000483708 PREX1Q8TCU6 1659 aa19.14■□□□□ 0.65
COMMD2-205ENST00000483708 SETD1BQ9UPS6 1966 aaKnown RBP19.13■□□□□ 0.65
COMMD2-205ENST00000483708 PZPP20742 1482 aa19.13■□□□□ 0.65
COMMD2-205ENST00000483708 CROCC2H7BZ55 1655 aa19.12■□□□□ 0.65
COMMD2-205ENST00000483708 EIF2AK4Q9P2K8 1649 aaKnown RBP19.11■□□□□ 0.65
COMMD2-205ENST00000483708 ANKRD50Q9ULJ7 1429 aa19.11■□□□□ 0.65
COMMD2-205ENST00000483708 RNF17Q9BXT8 1623 aaKnown RBP19.11■□□□□ 0.65
COMMD2-205ENST00000483708 ABCC3O15438 1527 aa19.1■□□□□ 0.65
COMMD2-205ENST00000483708 ROCK1Q13464 1354 aa19.1■□□□□ 0.65
COMMD2-205ENST00000483708 RRBP1Q9P2E9 1410 aaKnown RBP19.08■□□□□ 0.64
COMMD2-205ENST00000483708 NCKAP5LQ9HCH0 1330 aa19.07■□□□□ 0.64
COMMD2-205ENST00000483708 MROH1Q8NDA8 1641 aa19.06■□□□□ 0.64
COMMD2-205ENST00000483708 PKD2Q13563 968 aa19.05■□□□□ 0.64
COMMD2-205ENST00000483708 THEMISQ8N1K5 641 aaPredicted RBP19.05■□□□□ 0.64
COMMD2-205ENST00000483708 A2ML1A8K2U0 1454 aa19.04■□□□□ 0.64
COMMD2-205ENST00000483708 ARHGAP31Q2M1Z3 1444 aa19.04■□□□□ 0.64
COMMD2-205ENST00000483708 PRDM15P57071 1507 aaPredicted RBP19.03■□□□□ 0.64
COMMD2-205ENST00000483708 CAMSAP1Q5T5Y3 1602 aa19.01■□□□□ 0.63
COMMD2-205ENST00000483708 ERVK-7P63135 1459 aa19.01■□□□□ 0.63
COMMD2-205ENST00000483708 NLRP1Q9C000 1473 aa19.01■□□□□ 0.63
COMMD2-205ENST00000483708 CEP170BQ9Y4F5 1589 aaPredicted RBP19.01■□□□□ 0.63
COMMD2-205ENST00000483708 PTPRTO14522 1441 aa19■□□□□ 0.63
COMMD2-205ENST00000483708 MYO3AQ8NEV4 1616 aa19■□□□□ 0.63
COMMD2-205ENST00000483708 ZC3H13Q5T200 1668 aaKnown RBP18.99■□□□□ 0.63
COMMD2-205ENST00000483708 ANKLE2Q86XL3 938 aa18.99■□□□□ 0.63
COMMD2-205ENST00000483708 LMTK2Q8IWU2 1503 aa18.98■□□□□ 0.63
COMMD2-205ENST00000483708 PLA2R1Q13018 1463 aa18.97■□□□□ 0.63
COMMD2-205ENST00000483708 DEPDC5O75140 1603 aa18.97■□□□□ 0.63
COMMD2-205ENST00000483708 ILDR1Q86SU0 546 aaPredicted RBP18.97■□□□□ 0.63
COMMD2-205ENST00000483708 SPATA31D1Q6ZQQ2 1576 aa18.97■□□□□ 0.63
COMMD2-205ENST00000483708 NUP155O75694 1391 aa18.96■□□□□ 0.63
COMMD2-205ENST00000483708 STAG3Q9UJ98 1225 aa18.96■□□□□ 0.63
COMMD2-205ENST00000483708 VWDEQ8N2E2 1590 aa18.95■□□□□ 0.62
COMMD2-205ENST00000483708 IDI1Q13907 227 aa18.95■□□□□ 0.62
COMMD2-205ENST00000483708 CERKQ8TCT0 537 aa18.95■□□□□ 0.62
COMMD2-205ENST00000483708 STRCQ7RTU9 1775 aa18.95■□□□□ 0.62
COMMD2-205ENST00000483708 CEP152O94986 1710 aa18.94■□□□□ 0.62
COMMD2-205ENST00000483708 UGGT1Q9NYU2 1555 aa18.93■□□□□ 0.62
COMMD2-205ENST00000483708 ADRA2BP18089 450 aa18.93■□□□□ 0.62
COMMD2-205ENST00000483708 SLC52A1Q9NWF4 448 aa18.93■□□□□ 0.62
COMMD2-205ENST00000483708 ZNF142P52746 1687 aaPredicted RBP18.92■□□□□ 0.62
COMMD2-205ENST00000483708 NAIPQ13075 1403 aa18.91■□□□□ 0.62
COMMD2-205ENST00000483708 FBXO41Q8TF61 875 aa18.9■□□□□ 0.62
COMMD2-205ENST00000483708 NOS1P29475 1434 aa18.9■□□□□ 0.62
COMMD2-205ENST00000483708 TXNDC2Q86VQ3 553 aa18.89■□□□□ 0.61
COMMD2-205ENST00000483708 TRIM52Q96A61 297 aa18.88■□□□□ 0.61
COMMD2-205ENST00000483708 EID1Q9Y6B2 187 aa18.88■□□□□ 0.61
COMMD2-205ENST00000483708 EFCAB6Q5THR3 1501 aa18.88■□□□□ 0.61
COMMD2-205ENST00000483708 RPRD2Q5VT52 1461 aaKnown RBP18.87■□□□□ 0.61
COMMD2-205ENST00000483708 ZNF335Q9H4Z2 1342 aaPredicted RBP18.86■□□□□ 0.61
COMMD2-205ENST00000483708 LTKP29376 864 aa18.86■□□□□ 0.61
COMMD2-205ENST00000483708 HFM1A2PYH4 1435 aa18.85■□□□□ 0.61
COMMD2-205ENST00000483708 UNC13BO14795 1591 aa18.85■□□□□ 0.61
COMMD2-205ENST00000483708 PIAS4Q8N2W9 510 aaPredicted RBP18.84■□□□□ 0.61
COMMD2-205ENST00000483708 NPHP4O75161 1426 aaPredicted RBP18.83■□□□□ 0.61
COMMD2-205ENST00000483708 CHGAP10645 457 aaKnown RBP18.83■□□□□ 0.6
COMMD2-205ENST00000483708 TMEM2Q9UHN6 1383 aa18.82■□□□□ 0.6
COMMD2-205ENST00000483708 CFAP65Q6ZU64 1925 aaKnown RBP18.81■□□□□ 0.6
COMMD2-205ENST00000483708 MED14O60244 1454 aa18.8■□□□□ 0.6
COMMD2-205ENST00000483708 SYNMO15061 1565 aa18.8■□□□□ 0.6
COMMD2-205ENST00000483708 TET3O43151 1660 aa18.79■□□□□ 0.6
COMMD2-205ENST00000483708 HDGFP51858 240 aaKnown RBP18.79■□□□□ 0.6
COMMD2-205ENST00000483708 SLC4A1APQ9BWU0 796 aaKnown RBP18.79■□□□□ 0.6
COMMD2-205ENST00000483708 SCAF11Q99590 1463 aaKnown RBP18.78■□□□□ 0.6
COMMD2-205ENST00000483708 ARHGAP23Q9P227 1491 aa18.78■□□□□ 0.6
COMMD2-205ENST00000483708 IQGAP3Q86VI3 1631 aa18.78■□□□□ 0.6
COMMD2-205ENST00000483708 SLIT1O75093 1534 aa18.77■□□□□ 0.6
COMMD2-205ENST00000483708 LTBP4Q8N2S1 1624 aa18.77■□□□□ 0.6
COMMD2-205ENST00000483708 NEURL4Q96JN8 1562 aa18.76■□□□□ 0.59
COMMD2-205ENST00000483708 PIK3C2BO00750 1634 aa18.76■□□□□ 0.59
COMMD2-205ENST00000483708 BCANQ96GW7 911 aa18.76■□□□□ 0.59
COMMD2-205ENST00000483708 UBR1Q8IWV7 1749 aa18.75■□□□□ 0.59
COMMD2-205ENST00000483708 PPP1R15AO75807 674 aaPredicted RBP18.74■□□□□ 0.59
COMMD2-205ENST00000483708 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.73■□□□□ 0.59
COMMD2-205ENST00000483708 MSH5O43196 834 aa18.72■□□□□ 0.59
COMMD2-205ENST00000483708 ADGRB3O60242 1522 aa18.72■□□□□ 0.59
COMMD2-205ENST00000483708 GCC2Q8IWJ2 1684 aa18.72■□□□□ 0.59
COMMD2-205ENST00000483708 E9PCH4 1651 aa18.71■□□□□ 0.59
COMMD2-205ENST00000483708 SLC26A8Q96RN1 970 aa18.71■□□□□ 0.59
COMMD2-205ENST00000483708 ACIN1Q9UKV3 1341 aaKnown RBP18.71■□□□□ 0.59
COMMD2-205ENST00000483708 ZNF326Q5BKZ1 582 aaKnown RBP18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms