RNA–Protein interactions for RNA: ENST00000483670.5

PDCD4-208, Transcript of programmed cell death 4, humanhuman

TSL 5

Gene PDCD4, Length 774 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-208ENST00000483670 NCOA1Q15788 1441 aa39.52■■■■□ 3.92
PDCD4-208ENST00000483670 PLPPR3Q6T4P5 718 aa39.52■■■■□ 3.92
PDCD4-208ENST00000483670 RRP7BPQ9NSQ0 103 aa39.52■■■■□ 3.92
PDCD4-208ENST00000483670 CHIC2Q9UKJ5 165 aa39.51■■■■□ 3.92
PDCD4-208ENST00000483670 RRBP1Q9P2E9 1410 aaKnown RBP39.48■■■■□ 3.91
PDCD4-208ENST00000483670 SETD1BQ9UPS6 1966 aaKnown RBP39.48■■■■□ 3.91
PDCD4-208ENST00000483670 CEBPAP49715 358 aaPredicted RBP39.48■■■■□ 3.91
PDCD4-208ENST00000483670 ZMYM3Q14202 1370 aa39.47■■■■□ 3.91
PDCD4-208ENST00000483670 KDM5DQ9BY66 1539 aa39.46■■■■□ 3.91
PDCD4-208ENST00000483670 PREX1Q8TCU6 1659 aa39.41■■■■□ 3.9
PDCD4-208ENST00000483670 WASHC2CQ9Y4E1 1318 aa39.4■■■■□ 3.9
PDCD4-208ENST00000483670 NPATQ14207 1427 aa39.4■■■■□ 3.9
PDCD4-208ENST00000483670 ROCK1Q13464 1354 aa39.4■■■■□ 3.9
PDCD4-208ENST00000483670 ZC3H13Q5T200 1668 aaKnown RBP39.39■■■■□ 3.9
PDCD4-208ENST00000483670 LMTK3Q96Q04 1460 aa39.38■■■■□ 3.9
PDCD4-208ENST00000483670 PTPRKQ15262 1439 aa39.37■■■■□ 3.89
PDCD4-208ENST00000483670 MROH1Q8NDA8 1641 aa39.34■■■■□ 3.89
PDCD4-208ENST00000483670 DEPDC5O75140 1603 aa39.33■■■■□ 3.89
PDCD4-208ENST00000483670 PRDM15P57071 1507 aaPredicted RBP39.33■■■■□ 3.89
PDCD4-208ENST00000483670 UHRF1BP1Q6BDS2 1440 aa39.31■■■■□ 3.88
PDCD4-208ENST00000483670 ANKRD50Q9ULJ7 1429 aa39.3■■■■□ 3.88
PDCD4-208ENST00000483670 ABCC3O15438 1527 aa39.29■■■■□ 3.88
PDCD4-208ENST00000483670 ITGAEP38570 1179 aa39.28■■■■□ 3.88
PDCD4-208ENST00000483670 PZPP20742 1482 aa39.26■■■■□ 3.88
PDCD4-208ENST00000483670 KANK1Q14678 1352 aa39.26■■■■□ 3.88
PDCD4-208ENST00000483670 CEP152O94986 1710 aa39.2■■■■□ 3.87
PDCD4-208ENST00000483670 CAMSAP1Q5T5Y3 1602 aa39.18■■■■□ 3.86
PDCD4-208ENST00000483670 GRWD1Q9BQ67 446 aaKnown RBP eCLIP39.16■■■■□ 3.861e-6■■□□□ 14.5
PDCD4-208ENST00000483670 VWDEQ8N2E2 1590 aa39.14■■■■□ 3.86
PDCD4-208ENST00000483670 MYO3AQ8NEV4 1616 aa39.13■■■■□ 3.85
PDCD4-208ENST00000483670 LMTK2Q8IWU2 1503 aa39.13■■■■□ 3.85
PDCD4-208ENST00000483670 ARHGAP31Q2M1Z3 1444 aa39.12■■■■□ 3.85
PDCD4-208ENST00000483670 HSPA2P54652 639 aa39.1■■■■□ 3.85
PDCD4-208ENST00000483670 ZNF142P52746 1687 aaPredicted RBP39.09■■■■□ 3.85
PDCD4-208ENST00000483670 TNRQ92752 1358 aa39.09■■■■□ 3.85
PDCD4-208ENST00000483670 UNC13BO14795 1591 aa39.08■■■■□ 3.85
PDCD4-208ENST00000483670 FBXO31Q5XUX0 539 aaPredicted RBP39.07■■■■□ 3.85
PDCD4-208ENST00000483670 SPATA31D1Q6ZQQ2 1576 aa39.05■■■■□ 3.84
PDCD4-208ENST00000483670 CEP170BQ9Y4F5 1589 aaPredicted RBP39.04■■■■□ 3.84
PDCD4-208ENST00000483670 ERVK-7P63135 1459 aa39.01■■■■□ 3.84
PDCD4-208ENST00000483670 GCC2Q8IWJ2 1684 aa39■■■■□ 3.83
PDCD4-208ENST00000483670 A2ML1A8K2U0 1454 aa39■■■■□ 3.83
PDCD4-208ENST00000483670 NLRP1Q9C000 1473 aa39■■■■□ 3.83
PDCD4-208ENST00000483670 EFCAB6Q5THR3 1501 aa38.98■■■■□ 3.83
PDCD4-208ENST00000483670 HFM1A2PYH4 1435 aa38.97■■■■□ 3.83
PDCD4-208ENST00000483670 NAIPQ13075 1403 aa38.97■■■■□ 3.83
PDCD4-208ENST00000483670 CFAP65Q6ZU64 1925 aaKnown RBP38.95■■■■□ 3.83
PDCD4-208ENST00000483670 TET3O43151 1660 aa38.94■■■■□ 3.82
PDCD4-208ENST00000483670 IQGAP3Q86VI3 1631 aa38.92■■■■□ 3.82
PDCD4-208ENST00000483670 RPRD2Q5VT52 1461 aaKnown RBP38.92■■■■□ 3.82
PDCD4-208ENST00000483670 DMRT2Q9Y5R5 561 aa38.89■■■■□ 3.82
PDCD4-208ENST00000483670 PLA2R1Q13018 1463 aa38.88■■■■□ 3.81
PDCD4-208ENST00000483670 NUP155O75694 1391 aa38.88■■■■□ 3.81
PDCD4-208ENST00000483670 STRCQ7RTU9 1775 aa38.87■■■■□ 3.81
PDCD4-208ENST00000483670 UGGT1Q9NYU2 1555 aa38.83■■■■□ 3.81
PDCD4-208ENST00000483670 THEMISQ8N1K5 641 aaPredicted RBP38.81■■■■□ 3.8
PDCD4-208ENST00000483670 NOS1P29475 1434 aa38.8■■■■□ 3.8
PDCD4-208ENST00000483670 PKD2Q13563 968 aa38.78■■■■□ 3.8
PDCD4-208ENST00000483670 PTPRTO14522 1441 aa38.74■■■■□ 3.79
PDCD4-208ENST00000483670 E9PCH4 1651 aa38.74■■■■□ 3.79
PDCD4-208ENST00000483670 SLC52A1Q9NWF4 448 aa38.72■■■■□ 3.79
PDCD4-208ENST00000483670 SYNMO15061 1565 aa38.72■■■■□ 3.79
PDCD4-208ENST00000483670 ACIN1Q9UKV3 1341 aaKnown RBP38.71■■■■□ 3.79
PDCD4-208ENST00000483670 UBR1Q8IWV7 1749 aa38.71■■■■□ 3.79
PDCD4-208ENST00000483670 KDM5AP29375 1690 aaKnown RBP38.71■■■■□ 3.79
PDCD4-208ENST00000483670 PIK3C2BO00750 1634 aa38.67■■■■□ 3.78
PDCD4-208ENST00000483670 POLR1AO95602 1720 aaPredicted RBP38.66■■■■□ 3.78
PDCD4-208ENST00000483670 NCKAP5LQ9HCH0 1330 aa38.64■■■■□ 3.78
PDCD4-208ENST00000483670 ANKLE2Q86XL3 938 aa38.64■■■■□ 3.78
PDCD4-208ENST00000483670 IDI1Q13907 227 aa38.63■■■■□ 3.77
PDCD4-208ENST00000483670 TRIM52Q96A61 297 aa38.63■■■■□ 3.77
PDCD4-208ENST00000483670 STAG3Q9UJ98 1225 aa38.62■■■■□ 3.77
PDCD4-208ENST00000483670 SETD5Q9C0A6 1442 aa38.59■■■■□ 3.77
PDCD4-208ENST00000483670 ADGRB3O60242 1522 aa38.57■■■■□ 3.76
PDCD4-208ENST00000483670 SLIT1O75093 1534 aa38.57■■■■□ 3.76
PDCD4-208ENST00000483670 SPHKAPQ2M3C7 1700 aa38.55■■■■□ 3.76
PDCD4-208ENST00000483670 ARHGAP23Q9P227 1491 aa38.54■■■■□ 3.76
PDCD4-208ENST00000483670 MED14O60244 1454 aa38.53■■■■□ 3.76
PDCD4-208ENST00000483670 NEURL4Q96JN8 1562 aa38.53■■■■□ 3.76
PDCD4-208ENST00000483670 SLC4A1APQ9BWU0 796 aaKnown RBP38.5■■■■□ 3.75
PDCD4-208ENST00000483670 TMEM2Q9UHN6 1383 aa38.49■■■■□ 3.75
PDCD4-208ENST00000483670 EID1Q9Y6B2 187 aa38.48■■■■□ 3.75
PDCD4-208ENST00000483670 SCAF11Q99590 1463 aaKnown RBP38.47■■■■□ 3.75
PDCD4-208ENST00000483670 NPHP4O75161 1426 aaPredicted RBP38.46■■■■□ 3.75
PDCD4-208ENST00000483670 TMEM131LA2VDJ0 1609 aa38.44■■■■□ 3.74
PDCD4-208ENST00000483670 IQGAP1P46940 1657 aa38.43■■■■□ 3.74
PDCD4-208ENST00000483670 TRPM2O94759 1503 aa38.43■■■■□ 3.74
PDCD4-208ENST00000483670 TXNDC2Q86VQ3 553 aa38.42■■■■□ 3.74
PDCD4-208ENST00000483670 RAB3GAP2Q9H2M9 1393 aa38.41■■■■□ 3.74
PDCD4-208ENST00000483670 HDGFP51858 240 aaKnown RBP38.38■■■■□ 3.73
PDCD4-208ENST00000483670 MYO5BQ9ULV0 1848 aa38.38■■■■□ 3.73
PDCD4-208ENST00000483670 HRCP23327 699 aa38.37■■■■□ 3.73
PDCD4-208ENST00000483670 LTKP29376 864 aa38.36■■■■□ 3.73
PDCD4-208ENST00000483670 MPHOSPH9Q99550 1183 aa38.35■■■■□ 3.73
PDCD4-208ENST00000483670 CHGAP10645 457 aaKnown RBP38.34■■■■□ 3.73
PDCD4-208ENST00000483670 LTBP4Q8N2S1 1624 aa38.3■■■■□ 3.72
PDCD4-208ENST00000483670 CERKQ8TCT0 537 aa38.29■■■■□ 3.72
PDCD4-208ENST00000483670 CLTCL1P53675 1640 aa38.29■■■■□ 3.72
PDCD4-208ENST00000483670 ZFYVE9O95405 1425 aa38.29■■■■□ 3.72
PDCD4-208ENST00000483670 ABCF1Q8NE71 845 aaKnown RBP eCLIP38.28■■■■□ 3.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms