RNA–Protein interactions for RNA: ENST00000483414.1

LIMK1-205, Transcript of LIM domain kinase 1, humanhuman

TSL 1 (best)

Gene LIMK1, Length 3,374 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-205ENST00000483414 RAB3GAP2Q9H2M9 1393 aa14.5□□□□□ -0.09
LIMK1-205ENST00000483414 CEP152O94986 1710 aa14.49□□□□□ -0.09
LIMK1-205ENST00000483414 ZEB1P37275 1124 aaPredicted RBP14.49□□□□□ -0.09
LIMK1-205ENST00000483414 LMTK2Q8IWU2 1503 aa14.48□□□□□ -0.09
LIMK1-205ENST00000483414 PZPP20742 1482 aa14.48□□□□□ -0.09
LIMK1-205ENST00000483414 FAM135AQ9P2D6 1515 aa14.48□□□□□ -0.09
LIMK1-205ENST00000483414 CHIC2Q9UKJ5 165 aa14.47□□□□□ -0.09
LIMK1-205ENST00000483414 TET3O43151 1660 aa14.46□□□□□ -0.09
LIMK1-205ENST00000483414 E9PCH4 1651 aa14.46□□□□□ -0.09
LIMK1-205ENST00000483414 ADAMTSL3P82987 1691 aa14.46□□□□□ -0.09
LIMK1-205ENST00000483414 TSPY4P0CV99 314 aa14.45□□□□□ -0.1
LIMK1-205ENST00000483414 TSPY10P0CW01 314 aa14.45□□□□□ -0.1
LIMK1-205ENST00000483414 MROH2AA6NES4 1674 aa14.45□□□□□ -0.1
LIMK1-205ENST00000483414 CAMSAP1Q5T5Y3 1602 aa14.45□□□□□ -0.1
LIMK1-205ENST00000483414 ITGAEP38570 1179 aa14.44□□□□□ -0.1
LIMK1-205ENST00000483414 RRP7BPQ9NSQ0 103 aa14.44□□□□□ -0.1
LIMK1-205ENST00000483414 ABCC3O15438 1527 aa14.43□□□□□ -0.1
LIMK1-205ENST00000483414 CCER1Q8TC90 406 aaPredicted RBP14.42□□□□□ -0.1
LIMK1-205ENST00000483414 CLTCQ00610 1675 aaKnown RBP14.42□□□□□ -0.1
LIMK1-205ENST00000483414 EFCAB6Q5THR3 1501 aa14.42□□□□□ -0.1
LIMK1-205ENST00000483414 FER1L4A9Z1Z3 1794 aa14.41□□□□□ -0.1
LIMK1-205ENST00000483414 PELP1Q8IZL8 1130 aaKnown RBP14.39□□□□□ -0.11
LIMK1-205ENST00000483414 SPHKAPQ2M3C7 1700 aa14.38□□□□□ -0.11
LIMK1-205ENST00000483414 DHX57Q6P158 1386 aaKnown RBP14.37□□□□□ -0.11
LIMK1-205ENST00000483414 C3P01024 1663 aa14.37□□□□□ -0.11
LIMK1-205ENST00000483414 PIK3C2BO00750 1634 aa14.36□□□□□ -0.11
LIMK1-205ENST00000483414 MADDQ8WXG6 1647 aa14.36□□□□□ -0.11
LIMK1-205ENST00000483414 PREX1Q8TCU6 1659 aa14.36□□□□□ -0.11
LIMK1-205ENST00000483414 ARHGAP31Q2M1Z3 1444 aa14.33□□□□□ -0.12
LIMK1-205ENST00000483414 SYNMO15061 1565 aa14.33□□□□□ -0.12
LIMK1-205ENST00000483414 PLA2R1Q13018 1463 aa14.33□□□□□ -0.12
LIMK1-205ENST00000483414 RPRD2Q5VT52 1461 aaKnown RBP14.32□□□□□ -0.12
LIMK1-205ENST00000483414 SPATA31D1Q6ZQQ2 1576 aa14.31□□□□□ -0.12
LIMK1-205ENST00000483414 PTPRTO14522 1441 aa14.31□□□□□ -0.12
LIMK1-205ENST00000483414 TRPM2O94759 1503 aa14.31□□□□□ -0.12
LIMK1-205ENST00000483414 RIMS1Q86UR5 1692 aaKnown RBP14.3□□□□□ -0.12
LIMK1-205ENST00000483414 NPATQ14207 1427 aa14.29□□□□□ -0.12
LIMK1-205ENST00000483414 ACIN1Q9UKV3 1341 aaKnown RBP14.29□□□□□ -0.12
LIMK1-205ENST00000483414 NEURL4Q96JN8 1562 aa14.28□□□□□ -0.12
LIMK1-205ENST00000483414 CLTCL1P53675 1640 aa14.28□□□□□ -0.12
LIMK1-205ENST00000483414 KIF3BO15066 747 aa14.28□□□□□ -0.12
LIMK1-205ENST00000483414 NUP155O75694 1391 aa14.27□□□□□ -0.12
LIMK1-205ENST00000483414 NOS1P29475 1434 aa14.27□□□□□ -0.12
LIMK1-205ENST00000483414 IFT172Q9UG01 1749 aa14.27□□□□□ -0.13
LIMK1-205ENST00000483414 KDM5AP29375 1690 aaKnown RBP14.27□□□□□ -0.13
LIMK1-205ENST00000483414 PPP6R1Q9UPN7 881 aa14.26□□□□□ -0.13
LIMK1-205ENST00000483414 ANKRD30BQ9BXX2 1392 aa14.25□□□□□ -0.13
LIMK1-205ENST00000483414 MYO5BQ9ULV0 1848 aa14.24□□□□□ -0.13
LIMK1-205ENST00000483414 ZNF142P52746 1687 aaPredicted RBP14.24□□□□□ -0.13
LIMK1-205ENST00000483414 MPHOSPH9Q99550 1183 aa14.24□□□□□ -0.13
LIMK1-205ENST00000483414 ERVK-7P63135 1459 aa14.23□□□□□ -0.13
LIMK1-205ENST00000483414 CNTLNQ9NXG0 1405 aa14.23□□□□□ -0.13
LIMK1-205ENST00000483414 CFAP65Q6ZU64 1925 aaKnown RBP14.23□□□□□ -0.13
LIMK1-205ENST00000483414 UGGT1Q9NYU2 1555 aa14.23□□□□□ -0.13
LIMK1-205ENST00000483414 MYO3AQ8NEV4 1616 aa14.22□□□□□ -0.13
LIMK1-205ENST00000483414 TMEM131LA2VDJ0 1609 aa14.21□□□□□ -0.13
LIMK1-205ENST00000483414 UBR1Q8IWV7 1749 aa14.2□□□□□ -0.14
LIMK1-205ENST00000483414 NEUROD1Q13562 356 aa14.2□□□□□ -0.14
LIMK1-205ENST00000483414 ADGRB3O60242 1522 aa14.2□□□□□ -0.14
LIMK1-205ENST00000483414 KIF1BO60333 1816 aa14.2□□□□□ -0.14
LIMK1-205ENST00000483414 KANK1Q14678 1352 aa14.19□□□□□ -0.14
LIMK1-205ENST00000483414 MYT1LQ9UL68 1186 aa14.19□□□□□ -0.14
LIMK1-205ENST00000483414 ZMYM3Q14202 1370 aa14.18□□□□□ -0.14
LIMK1-205ENST00000483414 CLSPNQ9HAW4 1339 aa14.17□□□□□ -0.14
LIMK1-205ENST00000483414 PPLO60437 1756 aa14.17□□□□□ -0.14
LIMK1-205ENST00000483414 GGT6Q6P531 493 aa14.17□□□□□ -0.14
LIMK1-205ENST00000483414 PTPRMP28827 1452 aa14.17□□□□□ -0.14
LIMK1-205ENST00000483414 SPATA31E1Q6ZUB1 1445 aa14.16□□□□□ -0.14
LIMK1-205ENST00000483414 PKD2Q13563 968 aa14.16□□□□□ -0.14
LIMK1-205ENST00000483414 FOXD1Q16676 465 aa14.15□□□□□ -0.14
LIMK1-205ENST00000483414 SLC4A1APQ9BWU0 796 aaKnown RBP14.15□□□□□ -0.14
LIMK1-205ENST00000483414 WASHC2CQ9Y4E1 1318 aa14.14□□□□□ -0.15
LIMK1-205ENST00000483414 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.14□□□□□ -0.15
LIMK1-205ENST00000483414 GTF3C3Q9Y5Q9 886 aa14.14□□□□□ -0.15
LIMK1-205ENST00000483414 KDM4FA0A1W2PPD8 638 aa14.13□□□□□ -0.15
LIMK1-205ENST00000483414 TRIM52Q96A61 297 aa14.13□□□□□ -0.15
LIMK1-205ENST00000483414 NEXMIFQ5QGS0 1516 aa14.11□□□□□ -0.15
LIMK1-205ENST00000483414 SETD1AO15047 1707 aaKnown RBP14.11□□□□□ -0.15
LIMK1-205ENST00000483414 CEP170BQ9Y4F5 1589 aaPredicted RBP14.1□□□□□ -0.15
LIMK1-205ENST00000483414 NRXN1Q9ULB1 1477 aa14.09□□□□□ -0.15
LIMK1-205ENST00000483414 MLECQ14165 292 aa14.09□□□□□ -0.15
LIMK1-205ENST00000483414 NLRP1Q9C000 1473 aa14.08□□□□□ -0.15
LIMK1-205ENST00000483414 SETD1BQ9UPS6 1966 aaKnown RBP14.08□□□□□ -0.15
LIMK1-205ENST00000483414 ARID4BQ4LE39 1312 aaPredicted RBP14.08□□□□□ -0.16
LIMK1-205ENST00000483414 FBXO31Q5XUX0 539 aaPredicted RBP14.08□□□□□ -0.16
LIMK1-205ENST00000483414 NRXN3Q9Y4C0 1643 aa14.08□□□□□ -0.16
LIMK1-205ENST00000483414 A2ML1A8K2U0 1454 aa14.07□□□□□ -0.16
LIMK1-205ENST00000483414 DIEXFQ68CQ4 756 aaKnown RBP14.07□□□□□ -0.16
LIMK1-205ENST00000483414 SLIT1O75093 1534 aa14.06□□□□□ -0.16
LIMK1-205ENST00000483414 CCDC144AA2RUR9 1427 aa14.06□□□□□ -0.16
LIMK1-205ENST00000483414 ARHGAP23Q9P227 1491 aa14.05□□□□□ -0.16
LIMK1-205ENST00000483414 ZFYVE9O95405 1425 aa14.05□□□□□ -0.16
LIMK1-205ENST00000483414 YTHDC1Q96MU7 727 aaKnown RBP14.05□□□□□ -0.16
LIMK1-205ENST00000483414 KIAA1210Q9ULL0 1709 aa14.05□□□□□ -0.16
LIMK1-205ENST00000483414 SIN3AQ96ST3 1273 aa14.04□□□□□ -0.16
LIMK1-205ENST00000483414 MYOM2P54296 1465 aa14.04□□□□□ -0.16
LIMK1-205ENST00000483414 TRPM1Q7Z4N2 1603 aa14.04□□□□□ -0.16
LIMK1-205ENST00000483414 TNRQ92752 1358 aa14.04□□□□□ -0.16
LIMK1-205ENST00000483414 POLR1AO95602 1720 aaPredicted RBP14.04□□□□□ -0.16
LIMK1-205ENST00000483414 CEBPAP49715 358 aaPredicted RBP14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms