RNA–Protein interactions for RNA: ENST00000483293.1

PMS1-219, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 663 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-219ENST00000483293 PRIM1P49642 420 aaKnown RBP12.87□□□□□ -0.35
PMS1-219ENST00000483293 RBM33Q96EV2 1170 aaKnown RBP12.87□□□□□ -0.35
PMS1-219ENST00000483293 GPIHBP1Q8IV16 184 aa12.86□□□□□ -0.35
PMS1-219ENST00000483293 KDM4FA0A1W2PPD8 638 aa12.83□□□□□ -0.36
PMS1-219ENST00000483293 ADGRD1Q6QNK2 874 aa12.83□□□□□ -0.36
PMS1-219ENST00000483293 LHX6Q9UPM6 363 aa12.83□□□□□ -0.36
PMS1-219ENST00000483293 PCDHGA10Q9Y5H3 936 aa12.83□□□□□ -0.36
PMS1-219ENST00000483293 ZNF454Q8N9F8 522 aa12.81□□□□□ -0.36
PMS1-219ENST00000483293 PHF14O94880 888 aa12.8□□□□□ -0.36
PMS1-219ENST00000483293 MAP3K7O43318 606 aa12.78□□□□□ -0.36
PMS1-219ENST00000483293 FOSBP53539 338 aa12.77□□□□□ -0.37
PMS1-219ENST00000483293 EPAS1Q99814 870 aa12.77□□□□□ -0.37
PMS1-219ENST00000483293 TYW1BQ6NUM6 668 aa12.76□□□□□ -0.37
PMS1-219ENST00000483293 CDHR5Q9HBB8 845 aa12.76□□□□□ -0.37
PMS1-219ENST00000483293 SLC24A3Q9HC58 644 aa12.76□□□□□ -0.37
PMS1-219ENST00000483293 TSR1Q2NL82 804 aaKnown RBP12.75□□□□□ -0.37
PMS1-219ENST00000483293 KRI1Q8N9T8 703 aaKnown RBP12.75□□□□□ -0.37
PMS1-219ENST00000483293 JPH4Q96JJ6 628 aa12.75□□□□□ -0.37
PMS1-219ENST00000483293 IRX2Q9BZI1 471 aaPredicted RBP12.75□□□□□ -0.37
PMS1-219ENST00000483293 HRO43593 1189 aa12.74□□□□□ -0.37
PMS1-219ENST00000483293 ZMYND10O75800 440 aa12.74□□□□□ -0.37
PMS1-219ENST00000483293 EN1Q05925 392 aaPredicted RBP12.74□□□□□ -0.37
PMS1-219ENST00000483293 ZDHHC16Q969W1 377 aa12.73□□□□□ -0.37
PMS1-219ENST00000483293 ARHGAP33O14559 1287 aa12.72□□□□□ -0.37
PMS1-219ENST00000483293 RGS20O76081 388 aa12.72□□□□□ -0.37
PMS1-219ENST00000483293 BARGINQ6ZT62 677 aa12.71□□□□□ -0.37
PMS1-219ENST00000483293 ADAM33Q9BZ11 813 aa12.71□□□□□ -0.37
PMS1-219ENST00000483293 GPR37O15354 613 aa12.69□□□□□ -0.38
PMS1-219ENST00000483293 FECHP22830 423 aa12.69□□□□□ -0.38
PMS1-219ENST00000483293 FBXW7Q969H0 707 aa12.69□□□□□ -0.38
PMS1-219ENST00000483293 KCTD12Q96CX2 325 aaKnown RBP12.69□□□□□ -0.38
PMS1-219ENST00000483293 TK2O00142 265 aa12.68□□□□□ -0.38
PMS1-219ENST00000483293 FCHSD2O94868 740 aa12.68□□□□□ -0.38
PMS1-219ENST00000483293 PPP4R3BQ5MIZ7 849 aa12.67□□□□□ -0.38
PMS1-219ENST00000483293 C6orf132Q5T0Z8 1188 aa12.67□□□□□ -0.38
PMS1-219ENST00000483293 DMRTA1Q5VZB9 504 aa12.67□□□□□ -0.38
PMS1-219ENST00000483293 PTGDRQ13258 359 aa12.66□□□□□ -0.38
PMS1-219ENST00000483293 GNPATO15228 680 aa12.65□□□□□ -0.38
PMS1-219ENST00000483293 NPDC1Q9NQX5 325 aaPredicted RBP12.65□□□□□ -0.38
PMS1-219ENST00000483293 HIC1Q14526 733 aa12.63□□□□□ -0.39
PMS1-219ENST00000483293 IFFO2Q5TF58 517 aa12.63□□□□□ -0.39
PMS1-219ENST00000483293 PSEN2P49810 448 aa12.61□□□□□ -0.39
PMS1-219ENST00000483293 PSDA5PKW4 1024 aaPredicted RBP12.6□□□□□ -0.39
PMS1-219ENST00000483293 COL9A1P20849 921 aa12.59□□□□□ -0.39
PMS1-219ENST00000483293 AK7Q96M32 723 aa12.59□□□□□ -0.39
PMS1-219ENST00000483293 A0A0G2JS52 829 aa12.57□□□□□ -0.4
PMS1-219ENST00000483293 FAM161AQ3B820 660 aa12.57□□□□□ -0.4
PMS1-219ENST00000483293 KCNK17Q96T54 332 aa12.57□□□□□ -0.4
PMS1-219ENST00000483293 BCL2L12Q9HB09 334 aa12.57□□□□□ -0.4
PMS1-219ENST00000483293 PTPREP23469 700 aa12.56□□□□□ -0.4
PMS1-219ENST00000483293 PADI6Q6TGC4 694 aa12.56□□□□□ -0.4
PMS1-219ENST00000483293 MINK1Q8N4C8 1332 aaPredicted RBP12.56□□□□□ -0.4
PMS1-219ENST00000483293 MAP2K5Q13163 448 aa12.55□□□□□ -0.4
PMS1-219ENST00000483293 CCDC102AQ96A19 550 aa12.55□□□□□ -0.4
PMS1-219ENST00000483293 IRF6O14896 467 aa12.54□□□□□ -0.4
PMS1-219ENST00000483293 PTPN5P54829 565 aa12.54□□□□□ -0.4
PMS1-219ENST00000483293 NEUROD2Q15784 382 aa12.54□□□□□ -0.4
PMS1-219ENST00000483293 TRIM66O15016 1216 aa12.52□□□□□ -0.41
PMS1-219ENST00000483293 PRSS12P56730 875 aa12.51□□□□□ -0.41
PMS1-219ENST00000483293 CERKQ8TCT0 537 aa12.51□□□□□ -0.41
PMS1-219ENST00000483293 CDCA7LQ96GN5 454 aa12.51□□□□□ -0.41
PMS1-219ENST00000483293 BRPF1P55201 1214 aaPredicted RBP12.5□□□□□ -0.41
PMS1-219ENST00000483293 PROX2Q3B8N5 592 aa12.48□□□□□ -0.41
PMS1-219ENST00000483293 STAC3Q96MF2 364 aa12.48□□□□□ -0.41
PMS1-219ENST00000483293 GPBP1L1Q9HC44 474 aaPredicted RBP12.48□□□□□ -0.41
PMS1-219ENST00000483293 FAM198AQ9UFP1 575 aa12.48□□□□□ -0.41
PMS1-219ENST00000483293 PPP1R3GB7ZBB8 358 aa12.47□□□□□ -0.41
PMS1-219ENST00000483293 PDE4DQ08499 809 aa12.47□□□□□ -0.41
PMS1-219ENST00000483293 KCNH8Q96L42 1107 aa12.47□□□□□ -0.41
PMS1-219ENST00000483293 NLRP7Q8WX94 980 aa12.46□□□□□ -0.41
PMS1-219ENST00000483293 TSKSQ9UJT2 592 aa12.45□□□□□ -0.42
PMS1-219ENST00000483293 C3orf80F5H4A9 247 aa12.42□□□□□ -0.42
PMS1-219ENST00000483293 Q6ZNB5 142 aa12.42□□□□□ -0.42
PMS1-219ENST00000483293 PHOX2BQ99453 314 aa12.42□□□□□ -0.42
PMS1-219ENST00000483293 ADGRG1Q9Y653 693 aa12.42□□□□□ -0.42
PMS1-219ENST00000483293 TRIM6-TRIM34B2RNG4 842 aa12.41□□□□□ -0.42
PMS1-219ENST00000483293 SMAPO00193 183 aa12.41□□□□□ -0.42
PMS1-219ENST00000483293 TTC13Q8NBP0 860 aa12.41□□□□□ -0.42
PMS1-219ENST00000483293 VPS9D1Q9Y2B5 631 aa12.41□□□□□ -0.42
PMS1-219ENST00000483293 TTLL12Q14166 644 aaPredicted RBP12.4□□□□□ -0.42
PMS1-219ENST00000483293 THSD4Q6ZMP0 1018 aa12.4□□□□□ -0.42
PMS1-219ENST00000483293 NUDT18Q6ZVK8 323 aa12.4□□□□□ -0.42
PMS1-219ENST00000483293 ZBED2Q9BTP6 218 aa12.4□□□□□ -0.42
PMS1-219ENST00000483293 PNMA3Q9UL41 463 aa12.4□□□□□ -0.42
PMS1-219ENST00000483293 PACS2Q86VP3 889 aa12.39□□□□□ -0.43
PMS1-219ENST00000483293 KIAA1468Q9P260 1216 aa12.39□□□□□ -0.43
PMS1-219ENST00000483293 RBM27Q9P2N5 1060 aaKnown RBP12.39□□□□□ -0.43
PMS1-219ENST00000483293 OATP04181 439 aa12.38□□□□□ -0.43
PMS1-219ENST00000483293 MDM2Q00987 491 aaPredicted RBP12.38□□□□□ -0.43
PMS1-219ENST00000483293 METTL3Q86U44 580 aaKnown RBP12.38□□□□□ -0.43
PMS1-219ENST00000483293 TATDN2Q93075 761 aa12.37□□□□□ -0.43
PMS1-219ENST00000483293 KDM4CQ9H3R0 1056 aa12.37□□□□□ -0.43
PMS1-219ENST00000483293 PARP9Q8IXQ6 854 aa12.36□□□□□ -0.43
PMS1-219ENST00000483293 RBM46Q8TBY0 533 aaKnown RBP12.36□□□□□ -0.43
PMS1-219ENST00000483293 PXYLP1Q8TE99 480 aa12.36□□□□□ -0.43
PMS1-219ENST00000483293 REPIN1Q9BWE0 567 aaKnown RBP12.36□□□□□ -0.43
PMS1-219ENST00000483293 AMHR2Q16671 573 aa12.35□□□□□ -0.43
PMS1-219ENST00000483293 NBPF26B4DH59 902 aa12.33□□□□□ -0.44
PMS1-219ENST00000483293 LCE2BO14633 110 aa12.33□□□□□ -0.44
PMS1-219ENST00000483293 IL27Q8NEV9 243 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 398.4 ms